Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Z9C7LK Arachis hypogaea HOM05D002205 ORTHO05D008905 7.5e-71 270.4 136 100.0
arahy.Tifrunner.gnm1.ann1.0N86HX Arachis hypogaea HOM05D002205 ORTHO05D008905 2.7e-52 208.8 128 82.8
arahy.Tifrunner.gnm1.ann1.7K23LZ Arachis hypogaea HOM05D002205 ORTHO05D008905 6.0e-52 207.6 128 82.8
Lalb_Chr01g0013431 Lupinus albus HOM05D002205 ORTHO05D008905 1.5e-31 139.8 143 55.9
Psat4g188120 Pisum sativum HOM05D002205 ORTHO05D008905 2.0e-31 139.4 123 63.4
Lj3g0021915 Lotus japonicus HOM05D002205 ORTHO05D008905 4.9e-30 134.8 119 63.0
Medtr8g017270 Medicago truncatula HOM05D002205 ORTHO05D008905 1.0e-27 127.1 125 57.6
Glyma.07G009000 Glycine max HOM05D002205 ORTHO05D008905 1.9e-26 122.9 126 57.9
Glyma.08G192200 Glycine max HOM05D002205 ORTHO05D008905 3.3e-26 122.1 126 58.7
Phvul.010G138100 Phaseolus vulgaris HOM05D002205 ORTHO05D008905 4.3e-26 121.7 124 58.9
VMungo0331G1241 Vigna mungo HOM05D002205 ORTHO05D008905 2.2e-25 119.4 124 58.1
Aqoxy7G04021 Aquilegia oxysepala HOM05D002205 ORTHO05D008905 2.0e-23 112.8 111 55.0
CANSAT56G3898 Cannabis sativa HOM05D002205 ORTHO05D008905 2.0e-23 112.8 123 56.9
QL05p012040 Quercus lobata HOM05D002205 ORTHO05D008905 2.9e-22 109.0 84 67.9
vmacro18779 Vaccinium macrocarpon HOM05D002205 ORTHO05D008905 2.9e-22 109.0 129 52.7
Ciclev10025974m.g Citrus clementina HOM05D002205 ORTHO05D008905 3.8e-22 108.6 84 65.5
ATR0789G064 Amborella trichopoda HOM05D002205 ORTHO05D008905 8.5e-22 107.5 112 52.7
Haze_15966 Corylus avellana HOM05D002205 ORTHO05D008905 3.2e-21 105.5 75 69.3
Haze_15964 Corylus avellana HOM05D002205 ORTHO05D008905 4.2e-21 105.1 74 68.9
CiPaw.01G224100 Carya illinoinensis HOM05D002205 ORTHO05D008905 7.2e-21 104.4 84 65.5
MELO3C013096.2 Cucumis melo HOM05D002205 ORTHO05D008905 7.2e-21 104.4 85 62.4
Sabra03G0023600 Salix brachista HOM05D001215 ORTHO05D003146 7.2e-21 104.4 81 64.2
FAN02G0247 Fragaria x ananassa HOM05D002205 ORTHO05D008905 9.4e-21 104.0 81 61.7
HanXRQChr09g0276551 Helianthus annuus HOM05D002205 ORTHO05D008905 1.2e-20 103.6 113 53.1
A03p38420 Brassica napus HOM05D002205 ORTHO05D008905 2.1e-20 102.8 96 57.3
BraA03t12994Z Brassica rapa HOM05D002205 ORTHO05D008905 2.1e-20 102.8 96 57.3
Eucgr.F03136 Eucalyptus grandis HOM05D002205 ORTHO05D008905 2.1e-20 102.8 107 57.9
BcaB04g18799 Brassica carinata HOM05D002205 ORTHO05D008905 2.7e-20 102.4 129 48.8
COL.COLO4_30666 Corchorus olitorius HOM05D002205 ORTHO05D008905 2.7e-20 102.4 74 68.9
Nitab4.5_0001295g0270 Nicotiana tabacum HOM05D002205 ORTHO05D008905 2.7e-20 102.4 88 61.4
Atru.chr1.3735 Acer truncatum HOM05D002205 ORTHO05D008905 3.6e-20 102.1 74 66.2
BcaC01g03974 Brassica carinata HOM05D002205 ORTHO05D008905 3.6e-20 102.1 97 56.7
C03p46600 Brassica napus HOM05D002205 ORTHO05D008905 3.6e-20 102.1 97 56.7
BolC3t16923H Brassica oleracea HOM05D002205 ORTHO05D008905 3.6e-20 102.1 97 56.7
PSO210G6809 Papaver somniferum HOM05D002205 ORTHO05D008905 3.6e-20 102.1 86 59.3
Nitab4.5_0012068g0010 Nicotiana tabacum HOM05D002205 ORTHO05D008905 6.1e-20 101.3 121 52.1
Solyc03g121670.4 Solanum lycopersicum HOM05D002205 ORTHO05D008905 6.1e-20 101.3 125 50.4
PGSC0003DMG400002494 Solanum tuberosum HOM05D002205 ORTHO05D008905 6.1e-20 101.3 125 49.6
FAN09G2611 Fragaria x ananassa HOM05D002205 ORTHO05D008905 7.9e-20 100.9 81 60.5
Potri.003G036800 Populus trichocarpa HOM05D002205 ORTHO05D008905 7.9e-20 100.9 83 60.2
Sed0015267 Sechium edule HOM05D002205 ORTHO05D008905 7.9e-20 100.9 106 53.8
THA.LOC104815641 Tarenaya hassleriana HOM05D002205 ORTHO05D008905 7.9e-20 100.9 70 68.6
CsaV3_3G043800 Cucumis sativus L. HOM05D002205 ORTHO05D008905 1.0e-19 100.5 132 47.7
FvH4_6g33560 Fragaria vesca HOM05D002205 ORTHO05D008905 1.0e-19 100.5 81 59.3
FAN14G0293 Fragaria x ananassa HOM05D002205 ORTHO05D008905 1.0e-19 100.5 81 59.3
RcHm_v2.0_Chr2g0143471 Rosa chinensis HOM05D002205 ORTHO05D008905 1.0e-19 100.5 81 60.5
Sp3g12030 Schrenkiella parvula HOM05D002205 ORTHO05D008905 1.0e-19 100.5 127 47.2
Duzib235G0548 Durio zibethinus HOM05D002205 ORTHO05D008905 1.4e-19 100.1 123 50.4
CSS0010002 Camellia sinensis var. sinensis HOM05D002205 ORTHO05D008905 2.3e-19 99.4 129 48.8
Sopen03g040480 Solanum pennellii HOM05D002205 ORTHO05D008905 2.3e-19 99.4 125 49.6
Hma1.2p1_0388F.1_g142440 Hydrangea macrophylla HOM05D002205 ORTHO05D008905 3.0e-19 99.0 101 56.4
Hma1.2p1_2617F.1_g325510 Hydrangea macrophylla HOM05D002205 ORTHO05D008905 3.0e-19 99.0 101 56.4
AUR62038144 Chenopodium quinoa HOM05D002205 ORTHO05D008905 3.9e-19 98.6 109 52.3
Lj5A43G71 Lonicera japonica HOM05D002205 ORTHO05D008905 3.9e-19 98.6 74 63.5
Manes.04G140400 Manihot esculenta HOM05D002205 ORTHO05D008905 3.9e-19 98.6 81 59.3
ECA232G1049 Erigeron canadensis HOM05D002205 ORTHO05D008905 5.1e-19 98.2 93 58.1
AUR62009832 Chenopodium quinoa HOM05D002205 ORTHO05D008905 6.7e-19 97.8 70 67.1
Dinv30371 Davidia involucrata HOM05D002205 ORTHO05D008905 6.7e-19 97.8 129 48.8
Thhalv10021012m.g Eutrema salsugineum HOM05D002205 ORTHO05D008905 1.1e-18 97.1 70 65.7
PGR031G3692 Punica granatum HOM05D002205 ORTHO05D008905 1.1e-18 97.1 68 69.1
TWI79G0068 Tripterygium wilfordii HOM05D002205 ORTHO05D008905 1.1e-18 97.1 74 64.9
Cpa.g.sc25.47 Carica papaya HOM05D002205 ORTHO05D008905 1.5e-18 96.7 137 44.5
AL3G25940 Arabidopsis lyrata HOM05D002205 ORTHO05D008905 1.9e-18 96.3 104 51.0
SalBow6G3596 Salvia bowleyana HOM05D002205 ORTHO05D008905 1.9e-18 96.3 121 50.4
Aa31LG8G990 Aethionema arabicum HOM05D002205 ORTHO05D008905 2.5e-18 95.9 70 64.3
EL10Ac4g09462 Beta vulgaris HOM05D002205 ORTHO05D008905 2.5e-18 95.9 70 67.1
CAN.G1389.29 Capsicum annuum HOM05D002205 ORTHO05D008905 2.5e-18 95.9 81 59.3
Nn8g38823 Nelumbo nucifera HOM05D002205 ORTHO05D008905 2.5e-18 95.9 77 62.3
Prupe.3G048500 Prunus persica HOM05D002205 ORTHO05D008905 2.5e-18 95.9 84 58.3
SGA_v2.0_scaffold122G33371 Striga asiatica HOM05D002205 ORTHO05D008905 2.5e-18 95.9 128 49.2
TAR624G0974 Trochodendron aralioides HOM05D002205 ORTHO05D008905 2.5e-18 95.9 74 64.9
FAN05G0593 Fragaria x ananassa HOM05D002205 ORTHO05D008905 4.3e-18 95.1 84 59.5
Peaxi162Scf00038g00169 Petunia axillaris HOM05D002205 ORTHO05D008905 4.3e-18 95.1 88 59.1
SalBow6G5784 Salvia bowleyana HOM05D002205 ORTHO05D008905 5.7e-18 94.7 121 49.6
GSVIVG01016868001 Vitis vinifera HOM05D002205 ORTHO05D008905 5.7e-18 94.7 78 62.8
Carub.0003s1335 Capsella rubella HOM05D002205 ORTHO05D008905 7.4e-18 94.4 68 66.2
AT3G13800 Arabidopsis thaliana HOM05D002205 ORTHO05D008905 9.7e-18 94.0 68 64.7
MD09G1192200 Malus domestica HOM05D002205 ORTHO05D008905 9.7e-18 94.0 85 58.8
MBI01_g20336_MAGBIO Magnolia biondii HOM05D002205 ORTHO05D008905 1.3e-17 93.6 101 52.5
Lsat_1_v5_gn_4_94401 Lactuca sativa HOM05D002205 ORTHO05D008905 1.7e-17 93.2 81 60.5
MSTRG.22575 Avicennia marina HOM05D002205 ORTHO05D008905 2.2e-17 92.8 101 52.5
CARHR088570 Cardamine hirsuta HOM05D002205 ORTHO05D008905 2.2e-17 92.8 68 64.7
Rhsim08G0234400 Rhododendron simsii HOM05D002205 ORTHO05D008905 2.2e-17 92.8 72 63.9
Sc15g0000220 Simmondsia chinensis HOM05D002205 ORTHO05D008905 2.8e-17 92.4 67 68.7
Zm00001eb311000 Zea mays HOM05D002205 ORTHO05D008905 2.8e-17 92.4 126 46.8
Migut.I01033 Erythranthe guttata HOM05D002205 ORTHO05D008905 3.7e-17 92.0 104 51.0
Actinidia21768 Actinidia chinensis HOM05D002205 ORTHO05D008905 4.8e-17 91.7 72 63.9
Os09g0363800 Oryza sativa ssp. japonica HOM05D002205 ORTHO05D008905 4.8e-17 91.7 107 52.3
TPR.G19298 Trifolium pratense HOM05D002205 ORTHO05D008905 4.8e-17 91.7 65 66.2
ClCG07G013800 Citrullus lanatus HOM05D002205 ORTHO05D008905 8.2e-17 90.9 61 70.5
Cc04_g01860 Coffea canephora HOM05D002205 ORTHO05D008905 1.4e-16 90.1 77 55.8
Gohir.D10G060500 Gossypium hirsutum HOM05D002205 ORTHO05D008905 1.4e-16 90.1 119 47.9
Hund18709 Selenicereus undatus HOM05D002205 ORTHO05D008905 1.4e-16 90.1 118 48.3
HPP92_009142 Vanilla planifolia HOM05D002205 ORTHO05D008905 3.1e-16 89.0 81 54.3
DCAR_016151 Daucus carota HOM05D002205 ORTHO05D008905 4.1e-16 88.6 67 65.7
SEGI_33002 Sequoiadendron giganteum HOM05D002205 ORTHO05D008905 4.1e-16 88.6 77 57.1
MD17G1186100 Malus domestica HOM05D002205 ORTHO05D008905 6.9e-16 87.8 85 56.5
Gohir.A10G058900 Gossypium hirsutum HOM05D002205 ORTHO05D008905 9.1e-16 87.4 119 47.1
Gorai.011G064800 Gossypium raimondii HOM05D002205 ORTHO05D008905 9.1e-16 87.4 119 47.1
Manes.11G025500 Manihot esculenta HOM05D002205 ORTHO05D008905 1.5e-15 86.7 61 65.6
AagrBONN_evm.TU.Sc2ySwM_228.3237 Anthoceros agrestis HOM05D002205 ORTHO05D008905 3.8e-14 82.0 80 50.0
Pp3c2_540 Physcomitrium patens HOM05D002205 ORTHO05D008905 6.5e-14 81.3 66 63.6
Mapoly0019s0105 Marchantia polymorpha HOM05D002205 ORTHO05D008905 7.2e-13 77.8 99 44.4
SMO364G0714 Selaginella moellendorffii HOM05D002205 ORTHO05D008905 1.6e-12 76.6 66 56.1
TPR.G29295 Trifolium pratense HOM05D002205 ORTHO05D008905 1.4e-08 63.5 87 52.9
TPR.G26265 Trifolium pratense HOM05D002205 ORTHO05D004847 7.7e-07 57.8 77 45.5
Medtr2g018660 Medicago truncatula HOM05D002205 ORTHO05D004847 2.2e-06 56.2 77 45.5
SalBow1G1864 Salvia bowleyana HOM05D002205 ORTHO05D002629 3.8e-06 55.5 41 61.0
SalBow1G5538 Salvia bowleyana HOM05D002205 ORTHO05D002629 3.8e-06 55.5 41 61.0


User provided reference genes

Program Settings