Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 7.4e-164 580.5 297 100.0
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 8.5e-160 567.0 297 98.0
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 2.3e-128 462.6 297 79.1
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 3.6e-126 455.3 297 78.5
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 1.1e-125 453.8 297 77.8
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 1.8e-125 453.0 298 76.8
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 8.3e-123 444.1 297 74.7
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 1.4e-122 443.4 279 84.9
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 1.9e-122 443.0 297 75.4
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 3.2e-122 442.2 297 74.1
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 3.2e-122 442.2 297 74.4
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 4.1e-122 441.8 297 74.4
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 5.4e-122 441.4 299 74.6
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 1.0e-120 437.2 297 75.4
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 1.0e-120 437.2 297 73.4
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 1.7e-120 436.4 282 78.4
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 2.3e-120 436.0 297 74.4
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 3.0e-120 435.6 297 72.1
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 5.1e-120 434.9 297 73.4
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 5.1e-120 434.9 298 74.8
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 6.6e-120 434.5 297 72.1
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 6.6e-120 434.5 297 72.1
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 8.6e-120 434.1 297 73.4
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 8.6e-120 434.1 297 72.4
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 1.1e-119 433.7 298 73.5
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 1.9e-119 433.0 295 73.9
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 7.3e-119 431.0 297 72.1
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 1.2e-118 430.3 297 73.7
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 1.6e-118 429.9 297 73.4
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 1.6e-118 429.9 302 72.2
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 1.6e-118 429.9 292 72.6
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 8.1e-118 427.6 297 72.7
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 8.1e-118 427.6 302 71.9
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 1.1e-117 427.2 297 72.7
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 1.4e-117 426.8 297 72.1
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 1.8e-117 426.4 296 73.3
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 5.2e-117 424.9 297 74.1
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 5.2e-117 424.9 297 70.4
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 5.2e-117 424.9 298 71.5
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 5.2e-117 424.9 298 71.5
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 6.8e-117 424.5 302 72.5
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 8.9e-117 424.1 297 71.0
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 8.9e-117 424.1 297 71.7
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 2.6e-116 422.5 298 71.8
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 2.6e-116 422.5 297 71.7
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 5.8e-116 421.4 297 70.7
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 5.8e-116 421.4 297 71.0
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 1.7e-115 419.9 297 71.7
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 2.2e-115 419.5 297 71.7
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 2.9e-115 419.1 295 70.2
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 2.9e-115 419.1 295 69.5
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 3.7e-115 418.7 295 69.2
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 4.9e-115 418.3 297 71.0
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 1.1e-114 417.2 297 72.1
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 1.9e-114 416.4 295 69.2
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 4.1e-114 415.2 294 73.1
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 4.1e-114 415.2 297 71.4
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 9.2e-114 414.1 294 70.7
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 9.2e-114 414.1 294 70.7
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.2e-113 413.7 315 67.0
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 2.7e-113 412.5 297 69.7
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 3.5e-113 412.1 293 71.0
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 4.6e-113 411.8 297 69.7
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 1.0e-112 410.6 297 67.3
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.0e-112 410.6 315 66.7
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 1.0e-112 410.6 297 71.0
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.7e-112 409.8 315 66.7
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 1.7e-112 409.8 341 63.0
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 2.3e-112 409.5 295 68.8
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 3.9e-112 408.7 297 70.4
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 5.1e-112 408.3 283 72.1
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 6.6e-112 407.9 297 69.7
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 8.6e-112 407.5 295 69.8
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 1.5e-111 406.8 294 69.4
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 1.9e-111 406.4 298 69.5
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 3.3e-111 405.6 297 67.0
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 4.3e-111 405.2 297 68.7
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 9.5e-111 404.1 297 68.7
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 1.6e-110 403.3 297 70.0
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 4.7e-110 401.7 295 67.8
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 4.7e-110 401.7 298 69.5
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 5.2e-109 398.3 295 67.1
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 1.5e-108 396.7 294 69.0
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 1.5e-108 396.7 297 67.0
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 2.6e-108 396.0 282 70.2
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 4.4e-108 395.2 283 69.3
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 7.6e-108 394.4 294 68.0
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 9.9e-108 394.0 293 67.6
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 2.2e-107 392.9 294 67.7
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 2.9e-107 392.5 294 68.4
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 4.9e-107 391.7 294 68.0
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 6.4e-107 391.3 294 67.7
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 6.4e-107 391.3 294 68.0
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 6.4e-107 391.3 294 68.0
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 6.4e-107 391.3 297 68.4
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 8.4e-107 391.0 294 68.0
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 1.9e-106 389.8 261 73.9
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 2.4e-106 389.4 297 68.0
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 4.2e-106 388.7 294 68.0
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 1.6e-105 386.7 277 70.8
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 2.3e-104 382.9 287 68.3
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 3.0e-104 382.5 298 65.1
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 1.1e-103 380.6 297 65.3
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 1.9e-103 379.8 298 64.8
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 9.6e-103 377.5 294 67.0
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 1.6e-102 376.7 297 63.6
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.6e-102 376.7 250 72.8
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 8.1e-102 374.4 296 63.9
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 2.6e-100 369.4 320 60.6
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 4.6e-97 358.6 231 83.5
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 4.0e-93 345.5 297 63.0
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 4.5e-92 342.0 297 60.3
arahy.Tifrunner.gnm1.ann1.6K3MVX Arachis hypogaea HOM05D004415 ORTHO05D005198 3.8e-91 339.0 177 97.2
Lj6g0004921 Lotus japonicus HOM05D004415 ORTHO05D005198 7.1e-90 334.7 297 60.9
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 1.8e-85 320.1 219 72.1
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 9.0e-85 317.8 291 53.6
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 1.5e-84 317.0 223 71.3
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 1.2e-81 307.4 294 52.0
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 1.6e-81 307.0 219 71.2
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 6.0e-81 305.1 223 69.1
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 2.3e-80 303.1 294 53.7
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 5.1e-80 302.0 262 55.7
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 1.9e-79 300.1 295 51.9
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 7.4e-79 298.1 292 51.7
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 9.6e-79 297.7 294 52.4
arahy.Tifrunner.gnm1.ann1.W2C20P Arachis hypogaea HOM05D004415 ORTHO05D005198 2.9e-75 286.2 149 96.6
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 8.4e-75 284.6 223 65.5
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 9.3e-74 281.2 219 64.8
CDE03G0221 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 3.7e-70 269.2 280 52.1
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 2.9e-67 259.6 256 51.2
Duzib043G0003 Durio zibethinus HOM05D004415 ORTHO05D005198 1.2e-60 237.7 177 67.2
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 9.4e-58 228.0 141 85.1
Gohir.A05G111501 Gossypium hirsutum HOM05D004415 ORTHO05D005198 5.1e-56 222.2 214 56.1
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 6.3e-54 215.3 150 72.7
SEGI_29507 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 3.6e-49 199.5 162 58.6
TAR627G0753 Trochodendron aralioides HOM05D004415 ORTHO05D005198 6.7e-48 195.3 135 70.4
Zm00001eb072080 Zea mays HOM05D004415 ORTHO05D005198 1.7e-46 190.7 143 63.6
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 1.4e-45 187.6 134 78.4
MCO11G422 Micromonas commoda HOM05D004415 ORTHO05D005198 1.9e-42 177.2 265 36.6
VMungo0464G1344 Vigna mungo HOM05D004415 ORTHO05D005198 1.1e-37 161.4 106 77.4
Oeu063144.1 Olea europaea HOM05D004415 ORTHO05D005198 2.2e-35 153.7 182 48.9
arahy.Tifrunner.gnm1.ann1.479FYN Arachis hypogaea HOM05D004415 ORTHO05D005198 2.7e-33 146.7 116 71.6
SEGI_22365 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 1.2e-31 141.4 118 64.4
PRCOL_00005341 Prasinoderma coloniale HOM05D004415 ORTHO05D005198 4.1e-29 132.9 300 29.7
Zm00001eb266710 Zea mays HOM05D004415 ORTHO05D005198 2.3e-27 127.1 98 61.2
Cre08.g385700 Chlamydomonas reinhardtii HOM05D004415 ORTHO05D005198 1.4e-24 117.9 267 27.7
arahy.Tifrunner.gnm1.ann1.LII2ER Arachis hypogaea HOM05D004415 ORTHO05D005198 7.5e-23 112.1 103 65.0
arahy.Tifrunner.gnm1.ann1.8SCZ96 Arachis hypogaea HOM05D004415 ORTHO05D005198 1.8e-21 107.5 103 63.1
SGA_v2.0_scaffold298G47629 Striga asiatica HOM05D004415 ORTHO05D005198 3.2e-21 106.7 128 50.0
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 2.7e-20 103.6 81 59.3
Cc09_g04070 Coffea canephora HOM05D004415 ORTHO05D005198 4.7e-17 92.8 64 70.3
BcaB03g15995 Brassica carinata HOM05D004415 ORTHO05D005198 8.6e-11 72.0 92 47.8
VMungo0331G0484 Vigna mungo HOM05D003730 ORTHO05D005198 1.5e-07 61.2 45 66.7
HanXRQChr04g0119531 Helianthus annuus HOM05D004415 ORTHO05D005198 1.3e-06 58.2 39 64.1
SGA_v2.0_scaffold298G47630 Striga asiatica HOM05D004415 ORTHO05D005198 1.3e-06 58.2 59 54.2


User provided reference genes

Program Settings