Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.Y4U9X5 Arachis hypogaea HOM05D008259 ORTHO05D004271 2.1e-38 161.8 76 100.0
SalBow1G6083 Salvia bowleyana HOM05D008259 ORTHO05D013014 5.4e-34 147.1 97 76.3
Nitab4.5_0014528g0020 Nicotiana tabacum HOM05D008259 ORTHO05D004271 2.3e-29 131.7 102 66.7
vmacro22394 Vaccinium macrocarpon HOM05D008259 ORTHO05D004271 3.1e-29 131.3 74 86.5
Atru.chr6.228 Acer truncatum HOM05D004182 ORTHO05D004271 1.1e-26 122.9 71 85.9
Sed0008539 Sechium edule HOM05D008259 ORTHO05D013014 1.3e-24 115.9 60 93.3
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 1.3e-24 115.9 79 74.7
VMungo0720G0997 Vigna mungo HOM05D004182 ORTHO05D007321 1.3e-24 115.9 79 74.7
Migut.D01390 Erythranthe guttata HOM05D004182 ORTHO05D004271 1.2e-22 109.4 75 76.0
arahy.Tifrunner.gnm1.ann1.FC7Y3W Arachis hypogaea HOM05D000388 ORTHO05D009843 9.2e-18 93.2 44 95.5
DCAR_003888 Daucus carota HOM05D004182 ORTHO05D004271 1.6e-17 92.4 43 97.7
Nitab4.5_0000046g0170 Nicotiana tabacum HOM05D020983 ORTHO05D020217 1.6e-17 92.4 43 97.7
arahy.Tifrunner.gnm1.ann1.XUX2EX Arachis hypogaea HOM05D000963 ORTHO05D004271 1.7e-16 89.0 44 93.2
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 8.6e-16 86.7 43 90.7
EL10Ac7g17375 Beta vulgaris HOM05D004182 ORTHO05D004271 1.9e-15 85.5 43 90.7
EL10As15g24134 Beta vulgaris HOM05D004182 ORTHO05D004271 1.9e-15 85.5 43 90.7
Nitab4.5_0001379g0030 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.5e-15 85.1 43 88.4
Gohir.D05G007050 Gossypium hirsutum HOM05D004182 ORTHO05D004271 3.3e-15 84.7 47 85.1
Psat5g118800 Pisum sativum HOM05D004182 ORTHO05D007321 7.3e-15 83.6 41 95.1
Psat0s9163g0080 Pisum sativum HOM05D004182 ORTHO05D007321 2.1e-14 82.0 41 92.7
Gorai.003G057800 Gossypium raimondii HOM05D004182 ORTHO05D004271 1.8e-13 79.0 43 83.7
Nitab4.5_0001554g0040 Nicotiana tabacum HOM05D004182 ORTHO05D004271 4.0e-13 77.8 38 89.5
Migut.D01394 Erythranthe guttata HOM05D004182 ORTHO05D004271 5.2e-13 77.4 36 97.2
Peaxi162Scf00080g00510 Petunia axillaris HOM05D011856 ORTHO05D013014 5.2e-13 77.4 43 83.7
Sed0020621 Sechium edule HOM05D008259 ORTHO05D004271 1.5e-12 75.9 35 97.1
Sc23g0003920 Simmondsia chinensis HOM05D000806 ORTHO05D002320 3.4e-12 74.7 39 87.2
arahy.Tifrunner.gnm1.ann1.FF8QKQ Arachis hypogaea HOM05D001966 ORTHO05D011119 4.4e-12 74.3 41 85.4
Migut.D01393 Erythranthe guttata HOM05D008259 ORTHO05D004271 4.4e-12 74.3 41 85.4
Ca_24279_v3 Cicer arietinum L. HOM05D004182 ORTHO05D004271 5.8e-12 73.9 41 87.8
Ca_24280_v3 Cicer arietinum L. HOM05D004182 ORTHO05D007321 7.6e-12 73.6 40 85.0
EL10Ac7g17373 Beta vulgaris HOM05D004182 ORTHO05D010127 1.3e-11 72.8 41 82.9
BcaNung07086 Brassica carinata HOM05D001966 ORTHO05D011119 1.3e-11 72.8 38 89.5
Gohir.1Z049592 Gossypium hirsutum HOM05D008259 ORTHO05D004271 3.8e-11 71.2 41 82.9
Gohir.1Z050182 Gossypium hirsutum HOM05D008259 ORTHO05D004271 3.8e-11 71.2 41 82.9
Gohir.1Z050766 Gossypium hirsutum HOM05D008259 ORTHO05D004271 3.8e-11 71.2 41 82.9
Gohir.A02G134104 Gossypium hirsutum HOM05D008259 ORTHO05D004271 3.8e-11 71.2 41 82.9
Gohir.A04G039210 Gossypium hirsutum HOM05D008259 ORTHO05D004271 3.8e-11 71.2 41 82.9
Gohir.D01G169176 Gossypium hirsutum HOM05D008259 ORTHO05D004271 3.8e-11 71.2 41 82.9
Gohir.D03G055050 Gossypium hirsutum HOM05D004182 ORTHO05D004271 3.8e-11 71.2 43 76.7
Gorai.007G194600 Gossypium raimondii HOM05D008259 ORTHO05D004271 3.8e-11 71.2 41 82.9
Gohir.A01G139897 Gossypium hirsutum HOM05D008259 ORTHO05D004271 4.9e-11 70.9 41 80.5
Gohir.D08G114616 Gossypium hirsutum HOM05D008259 ORTHO05D004271 4.9e-11 70.9 43 81.4
COL.COLO4_00170 Corchorus olitorius HOM05D008259 ORTHO05D004271 8.4e-11 70.1 34 94.1
Gohir.A05G286333 Gossypium hirsutum HOM05D008259 ORTHO05D004271 1.1e-10 69.7 41 80.5
arahy.Tifrunner.gnm1.ann1.T8J8BP Arachis hypogaea HOM05D000216 ORTHO05D003638 1.4e-10 69.3 31 100.0
Glyma.14G130350 Glycine max HOM05D008259 ORTHO05D004271 2.4e-10 68.6 44 81.8
Gohir.A12G084030 Gossypium hirsutum HOM05D008259 ORTHO05D004271 5.4e-10 67.4 41 80.5
Gohir.1Z049681 Gossypium hirsutum HOM05D008259 ORTHO05D004271 9.2e-10 66.6 41 78.0
Hma1.2p1_1135F.1_g260415 Hydrangea macrophylla HOM05D008259 ORTHO05D004271 9.2e-10 66.6 41 80.5
arahy.Tifrunner.gnm1.ann1.FTZ997 Arachis hypogaea HOM05D000445 ORTHO05D000314 1.2e-09 66.2 29 100.0
Gohir.A06G137002 Gossypium hirsutum HOM05D008259 ORTHO05D004271 1.2e-09 66.2 41 78.0
Glyma.18G068650 Glycine max HOM05D008259 ORTHO05D004271 4.6e-09 64.3 41 70.7
arahy.Tifrunner.gnm1.ann1.S2CMM5 Arachis hypogaea HOM05D000002 ORTHO05D000047 6.0e-09 63.9 30 96.7
Lsat_1_v5_gn_2_31300 Lactuca sativa HOM05D001070 ORTHO05D002096 6.0e-09 63.9 38 81.6
Gohir.A01G119750 Gossypium hirsutum HOM05D008259 ORTHO05D004271 7.8e-09 63.5 41 75.6
Gohir.D04G151250 Gossypium hirsutum HOM05D008259 ORTHO05D004271 7.8e-09 63.5 33 84.8
ClCG04G001030 Citrullus lanatus HOM05D001070 ORTHO05D002096 3.0e-08 61.6 40 75.0
Gorai.012G137900 Gossypium raimondii HOM05D008259 ORTHO05D004271 3.0e-08 61.6 33 84.8
Gohir.D02G151932 Gossypium hirsutum HOM05D008259 ORTHO05D004271 3.9e-08 61.2 33 81.8
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 1.9e-07 58.9 33 81.8
TAR636G0342 Trochodendron aralioides HOM05D001787 ORTHO05D003488 5.6e-07 57.4 26 96.2
Gohir.D13G103606 Gossypium hirsutum HOM05D008259 ORTHO05D004271 1.2e-06 56.2 41 63.4
Gorai.013G116300 Gossypium raimondii HOM05D008259 ORTHO05D004271 1.6e-06 55.8 41 63.4
Dinv13700 Davidia involucrata HOM05D000001 ORTHO05D000003 4.7e-06 54.3 28 85.7
Medtr4g111700 Medicago truncatula HOM05D001966 ORTHO05D004271 4.7e-06 54.3 29 79.3
EL10Ac4g09858 Beta vulgaris HOM05D000306 ORTHO05D018277 8.1e-06 53.5 30 80.0


User provided reference genes

Program Settings