Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.SFA2KC Arachis hypogaea HOM05D004569 ORTHO05D005333 1.6e-74 282.7 146 100.0
arahy.Tifrunner.gnm1.ann1.NDW3GA Arachis hypogaea HOM05D004569 ORTHO05D005333 2.5e-72 275.4 146 97.9
Lj6g0017152 Lotus japonicus HOM05D004569 ORTHO05D005333 4.2e-51 204.9 163 68.7
Phvul.001G230900 Phaseolus vulgaris HOM05D004569 ORTHO05D005333 9.3e-51 203.8 123 82.9
VMungo1383G1439 Vigna mungo HOM05D004569 ORTHO05D005333 2.8e-47 192.2 155 69.0
Lalb_Chr06g0161741 Lupinus albus HOM05D004569 ORTHO05D005333 6.2e-47 191.0 167 63.5
Glyma.18G039600 Glycine max HOM05D004569 ORTHO05D005333 1.8e-46 189.5 162 67.3
Glyma.11G217000 Glycine max HOM05D004569 ORTHO05D005333 2.6e-45 185.7 162 65.4
VMungo1383G2501 Vigna mungo HOM05D004569 ORTHO05D005333 2.9e-44 182.2 124 75.8
Medtr7g034585 Medicago truncatula HOM05D004569 ORTHO05D005333 4.9e-44 181.4 160 61.2
Psat3g163880 Pisum sativum HOM05D004569 ORTHO05D005333 9.3e-43 177.2 144 64.6
arahy.Tifrunner.gnm1.ann1.LSLG48 Arachis hypogaea HOM05D001291 ORTHO05D005333 1.6e-42 176.4 101 89.1
Lj5g0008299 Lotus japonicus HOM05D004569 ORTHO05D005333 1.8e-41 172.9 144 65.3
Ca_17658_v3 Cicer arietinum L. HOM05D004569 ORTHO05D005333 1.9e-40 169.5 155 61.9
CiPaw.01G195800 Carya illinoinensis HOM05D004569 ORTHO05D005333 9.7e-40 167.2 139 64.7
TPR.G14863 Trifolium pratense HOM05D004569 ORTHO05D005333 1.6e-39 166.4 142 62.0
Ciclev10006087m.g Citrus clementina HOM05D004569 ORTHO05D005333 1.4e-38 163.3 143 60.8
Cfa006984 Carpinus fangiana HOM05D004569 ORTHO05D005333 2.4e-38 162.5 122 69.7
TAR365G0299 Trochodendron aralioides HOM05D004569 ORTHO05D005333 1.5e-37 159.8 141 58.9
ClCG06G006470 Citrullus lanatus HOM05D004569 ORTHO05D005333 5.9e-37 157.9 146 61.0
Potri.005G067600 Populus trichocarpa HOM05D004569 ORTHO05D005333 1.0e-36 157.1 137 62.0
Haze_03750 Corylus avellana HOM05D004569 ORTHO05D005333 2.9e-36 155.6 122 66.4
PSO832G4509 Papaver somniferum HOM05D004569 ORTHO05D005333 2.9e-36 155.6 129 61.2
CANSAT78G0168 Cannabis sativa HOM05D004569 ORTHO05D005333 3.8e-36 155.2 137 59.1
Duzib052G0452 Durio zibethinus HOM05D004569 ORTHO05D005333 3.8e-36 155.2 137 59.9
Nn1g01867 Nelumbo nucifera HOM05D004569 ORTHO05D005333 5.0e-36 154.8 122 63.9
Thecc.04G238000 Theobroma cacao HOM05D004569 ORTHO05D005333 6.5e-36 154.5 137 59.1
Atru.chr4.2374 Acer truncatum HOM05D004569 ORTHO05D005333 8.5e-36 154.1 147 56.5
PSO210G1425 Papaver somniferum HOM05D004569 ORTHO05D005333 8.5e-36 154.1 122 63.1
Dinv07545 Davidia involucrata HOM05D004569 ORTHO05D005333 1.1e-35 153.7 147 58.5
Nitab4.5_0000321g0230 Nicotiana tabacum HOM05D004569 ORTHO05D005333 1.1e-35 153.7 152 57.9
Gohir.A02G034100 Gossypium hirsutum HOM05D004569 ORTHO05D005333 1.9e-35 152.9 122 64.8
Peaxi162Scf00192g01617 Petunia axillaris HOM05D004569 ORTHO05D005333 1.9e-35 152.9 147 59.9
AT5G62950 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 5.5e-35 151.4 138 60.1
THA.LOC104827037 Tarenaya hassleriana HOM05D004569 ORTHO05D005333 5.5e-35 151.4 152 55.3
Nitab4.5_0004412g0030 Nicotiana tabacum HOM05D004569 ORTHO05D005333 7.2e-35 151.0 149 58.4
Medtr6g045603 Medicago truncatula HOM05D004569 ORTHO05D005333 9.4e-35 150.6 160 56.2
Aa31LG11G680 Aethionema arabicum HOM05D004569 ORTHO05D005333 1.2e-34 150.2 137 59.9
CsaV3_2G013430 Cucumis sativus L. HOM05D004569 ORTHO05D005333 1.2e-34 150.2 161 55.3
Duzib052G0972 Durio zibethinus HOM05D004569 ORTHO05D005333 1.2e-34 150.2 137 58.4
Gohir.D02G040900 Gossypium hirsutum HOM05D004569 ORTHO05D005333 1.2e-34 150.2 122 63.9
CAN.G135.33 Capsicum annuum HOM05D004569 ORTHO05D005333 2.1e-34 149.4 149 57.7
Gorai.005G045300 Gossypium raimondii HOM05D004569 ORTHO05D005333 4.6e-34 148.3 118 64.4
Sed0021164 Sechium edule HOM05D004569 ORTHO05D005333 6.1e-34 147.9 155 56.1
GSVIVG01036653001 Vitis vinifera HOM05D004569 ORTHO05D005333 1.4e-33 146.7 119 64.7
Manes.02G208200 Manihot esculenta HOM05D004569 ORTHO05D005333 1.8e-33 146.4 129 60.5
AL8G39970 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 3.0e-33 145.6 140 57.9
Aqoxy5G00407 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 6.7e-33 144.4 120 60.0
Sc19g0003960 Simmondsia chinensis HOM05D004569 ORTHO05D005333 1.1e-32 143.7 141 57.4
AL3G51140 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 1.5e-32 143.3 146 56.8
CARHR276760 Cardamine hirsuta HOM05D004569 ORTHO05D005333 1.5e-32 143.3 143 54.5
Thhalv10005100m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 1.5e-32 143.3 141 56.0
Carub.0008s2366 Capsella rubella HOM05D004569 ORTHO05D005333 3.3e-32 142.1 144 54.9
AUR62028629 Chenopodium quinoa HOM05D004569 ORTHO05D005333 4.3e-32 141.7 148 50.7
PGR004G1818 Punica granatum HOM05D004569 ORTHO05D005333 7.4e-32 141.0 141 52.5
Hund09493 Selenicereus undatus HOM05D004569 ORTHO05D005333 9.7e-32 140.6 158 53.2
CSS0021073 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 1.3e-31 140.2 119 59.7
Carub.0004s0755 Capsella rubella HOM05D004569 ORTHO05D005333 1.3e-31 140.2 143 54.5
Thhalv10000370m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 1.3e-31 140.2 141 57.4
CSS0011446 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 1.7e-31 139.8 146 54.1
MD13G1198900 Malus domestica HOM05D004569 ORTHO05D005333 1.7e-31 139.8 155 52.3
MELO3C014285.2 Cucumis melo HOM05D004569 ORTHO05D005333 3.7e-31 138.7 161 52.2
ECA246G0155 Erigeron canadensis HOM05D004569 ORTHO05D005333 3.7e-31 138.7 123 60.2
HanXRQChr05g0158611 Helianthus annuus HOM05D004569 ORTHO05D005333 4.8e-31 138.3 123 59.3
TWI63G1720 Tripterygium wilfordii HOM05D004569 ORTHO05D005333 6.3e-31 137.9 153 49.0
PGR031G3247 Punica granatum HOM05D004569 ORTHO05D005333 8.2e-31 137.5 140 53.6
Ah.02g110960 Amaranthus hybridus HOM05D000936 ORTHO05D001411 1.1e-30 137.1 131 54.2
Medtr6g045613 Medicago truncatula HOM05D004569 ORTHO05D005333 1.4e-30 136.7 92 71.7
SalBow2G1663 Salvia bowleyana HOM05D004569 ORTHO05D005333 1.8e-30 136.3 141 51.1
Sp2g26090 Schrenkiella parvula HOM05D004569 ORTHO05D005333 2.4e-30 136.0 144 57.6
Psat3g162000 Pisum sativum HOM05D004569 ORTHO05D005333 3.1e-30 135.6 94 69.1
SGA_v2.0_scaffold353G49718 Striga asiatica HOM05D004569 ORTHO05D005333 3.1e-30 135.6 140 52.9
Cc03_g04240 Coffea canephora HOM05D004569 ORTHO05D005333 5.3e-30 134.8 153 52.3
MBI18_g09782_MAGBIO Magnolia biondii HOM05D004569 ORTHO05D005333 5.3e-30 134.8 122 54.9
SGA_v2.0_scaffold45G17132 Striga asiatica HOM05D004044 ORTHO05D005333 5.3e-30 134.8 138 52.9
Eucgr.H03416 Eucalyptus grandis HOM05D004569 ORTHO05D005333 9.1e-30 134.0 123 55.3
Peaxi162Scf00904g00217 Petunia axillaris HOM05D004569 ORTHO05D005333 9.1e-30 134.0 145 55.2
Rhsim01G0189100 Rhododendron simsii HOM05D004569 ORTHO05D005333 1.2e-29 133.7 148 52.0
CSS0049273 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 1.5e-29 133.3 146 52.7
CDE05G0131 Ceratophyllum demersum HOM05D004569 ORTHO05D005333 1.5e-29 133.3 122 56.6
Oeu058961.1 Olea europaea HOM05D004569 ORTHO05D005333 1.5e-29 133.3 147 51.7
Prupe.1G020700 Prunus persica HOM05D004569 ORTHO05D005333 2.0e-29 132.9 121 57.0
HanXRQChr06g0173001 Helianthus annuus HOM05D004569 ORTHO05D005333 2.6e-29 132.5 126 56.3
BcaB07g29675 Brassica carinata HOM05D004569 ORTHO05D005333 4.5e-29 131.7 142 54.9
BcaC08g46303 Brassica carinata HOM05D004569 ORTHO05D005333 3.8e-28 128.6 146 54.1
Oeu042815.1 Olea europaea HOM05D004569 ORTHO05D005333 3.8e-28 128.6 129 52.7
BolC6t39293H Brassica oleracea HOM05D004569 ORTHO05D005333 6.5e-28 127.9 146 53.4
SalBow8G0974 Salvia bowleyana HOM05D004569 ORTHO05D005333 6.5e-28 127.9 137 49.6
BcaC03g18183 Brassica carinata HOM05D004569 ORTHO05D005333 8.5e-28 127.5 146 54.8
Atru.chr4.2398 Acer truncatum HOM05D004569 ORTHO05D005333 1.1e-27 127.1 94 67.0
C06p41320 Brassica napus HOM05D004569 ORTHO05D005333 1.1e-27 127.1 145 53.8
Sabra05G0055500 Salix brachista HOM05D004569 ORTHO05D005333 1.4e-27 126.7 89 71.9
C02p62490 Brassica napus HOM05D004569 ORTHO05D005333 1.9e-27 126.3 145 54.5
BolC2t12308H Brassica oleracea HOM05D004569 ORTHO05D005333 1.9e-27 126.3 145 54.5
Migut.B00535 Erythranthe guttata HOM05D004569 ORTHO05D005333 3.2e-27 125.6 129 49.6
Lsat_1_v5_gn_1_12980 Lactuca sativa HOM05D004569 ORTHO05D005333 3.2e-27 125.6 129 51.2
vmacro17995 Vaccinium macrocarpon HOM05D004569 ORTHO05D005333 3.2e-27 125.6 119 52.1
A02p42590 Brassica napus HOM05D004569 ORTHO05D005333 4.2e-27 125.2 145 53.1
BraA02t09187Z Brassica rapa HOM05D004569 ORTHO05D005333 4.2e-27 125.2 145 53.1
Sopen11g003670 Solanum pennellii HOM05D004569 ORTHO05D005333 5.5e-27 124.8 165 46.1
Nitab4.5_0004743g0130 Nicotiana tabacum HOM05D004569 ORTHO05D005333 1.2e-26 123.6 139 54.7
ATR0829G086 Amborella trichopoda HOM05D004569 ORTHO05D005333 4.7e-26 121.7 126 52.4
RcHm_v2.0_Chr6g0280701 Rosa chinensis HOM05D004569 ORTHO05D005333 7.9e-26 120.9 121 52.9
Rhsim04G0197700 Rhododendron simsii HOM05D004569 ORTHO05D005333 1.0e-25 120.6 148 50.7
RcHm_v2.0_Chr4g0387641 Rosa chinensis HOM05D004569 ORTHO05D005333 1.4e-25 120.2 121 52.9
unitig_748.g7305 Utricularia gibba HOM05D004569 ORTHO05D005333 5.1e-25 118.2 121 50.4
Dinv40544 Davidia involucrata HOM05D004569 ORTHO05D005333 8.8e-25 117.5 89 65.2
Zm00001eb076270 Zea mays HOM05D004569 ORTHO05D005333 1.1e-24 117.1 153 45.1
Hma1.2p1_0602F.1_g187570 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 1.5e-24 116.7 89 62.9
Zm00001eb076250 Zea mays HOM05D004569 ORTHO05D005333 2.0e-24 116.3 153 45.1
Zm00001eb076290 Zea mays HOM05D004569 ORTHO05D005333 2.6e-24 115.9 133 48.1
Zm00001eb310390 Zea mays HOM05D004569 ORTHO05D005333 2.6e-24 115.9 133 48.1
FvH4_5g27570 Fragaria vesca HOM05D004569 ORTHO05D005333 7.4e-24 114.4 142 47.9
SalBow1G3047 Salvia bowleyana HOM05D004569 ORTHO05D005333 1.3e-23 113.6 125 51.2
A09p07940 Brassica napus HOM05D004569 ORTHO05D005333 1.7e-23 113.2 148 49.3
FvH4_4g01070 Fragaria vesca HOM05D004569 ORTHO05D005333 1.7e-23 113.2 142 46.5
BcaB04g19957 Brassica carinata HOM05D004569 ORTHO05D005333 2.2e-23 112.8 146 51.4
Mapoly0090s0037 Marchantia polymorpha HOM05D004569 ORTHO05D005333 2.2e-23 112.8 123 45.5
Aqoxy2G03457 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 2.8e-23 112.5 83 65.1
BcaC04g23378 Brassica carinata HOM05D004569 ORTHO05D005333 2.8e-23 112.5 136 48.5
C09p08990 Brassica napus HOM05D004569 ORTHO05D005333 2.8e-23 112.5 143 48.3
BolC9t53811H Brassica oleracea HOM05D004569 ORTHO05D005333 2.8e-23 112.5 143 48.3
FAN12G4296 Fragaria x ananassa HOM05D004569 ORTHO05D005333 2.8e-23 112.5 120 50.0
BraA09t36445Z Brassica rapa HOM05D004569 ORTHO05D005333 8.2e-23 110.9 139 48.9
PGSC0003DMG400027326 Solanum tuberosum HOM05D004569 ORTHO05D005333 1.1e-22 110.5 164 42.1
BcaC01g02544 Brassica carinata HOM05D004569 ORTHO05D005333 7.0e-22 107.8 139 51.1
C03p63650 Brassica napus HOM05D004569 ORTHO05D005333 7.0e-22 107.8 139 51.1
BolC3t18624H Brassica oleracea HOM05D004569 ORTHO05D005333 7.0e-22 107.8 139 51.1
Lsat_1_v5_gn_6_95400 Lactuca sativa HOM05D004569 ORTHO05D005333 1.2e-21 107.1 104 52.9
Atru.chr5.182 Acer truncatum HOM05D004569 ORTHO05D005333 5.9e-21 104.8 131 47.3
AagrBONN_evm.TU.Sc2ySwM_228.788 Anthoceros agrestis HOM05D004569 ORTHO05D005333 1.7e-20 103.2 141 41.1
BcaB02g09711 Brassica carinata HOM05D004569 ORTHO05D005333 6.5e-20 101.3 132 50.0
TAR636G3114 Trochodendron aralioides HOM05D004569 ORTHO05D005333 8.5e-20 100.9 106 52.8
Dinv07599 Davidia involucrata HOM05D004569 ORTHO05D005333 1.1e-19 100.5 75 65.3
Pp3c21_14050 Physcomitrium patens HOM05D004569 ORTHO05D005333 2.5e-19 99.4 146 37.0
Phvul.001G219600 Phaseolus vulgaris HOM05D004569 ORTHO05D005333 2.1e-18 96.3 142 45.1
FAN13G2556 Fragaria x ananassa HOM05D004569 ORTHO05D005333 2.7e-18 95.9 141 44.7
arahy.Tifrunner.gnm1.ann1.E6N1JB Arachis hypogaea HOM05D039044 ORTHO05D005333 3.6e-18 95.5 53 90.6
BraA06t25922Z Brassica rapa HOM05D004569 ORTHO05D005333 3.6e-18 95.5 119 48.7
Os12g0488800 Oryza sativa ssp. japonica HOM05D004569 ORTHO05D005333 3.6e-18 95.5 92 54.3
AT3G28956 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 4.7e-18 95.1 62 71.0
COL.COLO4_21559 Corchorus olitorius HOM05D004569 ORTHO05D005333 6.1e-18 94.7 111 47.7
CSS0028808 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 1.8e-17 93.2 146 42.5
arahy.Tifrunner.gnm1.ann1.JBSN1X Arachis hypogaea HOM05D039044 ORTHO05D005333 3.0e-17 92.4 53 86.8
AUR62033084 Chenopodium quinoa HOM05D004569 ORTHO05D005333 3.0e-17 92.4 94 50.0
arahy.Tifrunner.gnm1.ann1.2SYB94 Arachis hypogaea HOM05D039044 ORTHO05D005333 6.7e-17 91.3 51 86.3
HPP92_022914 Vanilla planifolia HOM05D004569 ORTHO05D005333 6.7e-17 91.3 153 41.2
SMO343G0078 Selaginella moellendorffii HOM05D004569 ORTHO05D005333 3.3e-16 89.0 141 39.0
FAN18G3311 Fragaria x ananassa HOM05D004569 ORTHO05D005333 2.4e-14 82.8 142 40.8
SEGI_13490 Sequoiadendron giganteum HOM05D004569 ORTHO05D000001 1.7e-12 76.6 94 43.6
GSVIVG01008529001 Vitis vinifera HOM05D004569 ORTHO05D005333 7.2e-11 71.2 52 63.5
AUR62008054 Chenopodium quinoa HOM05D000001 ORTHO05D000501 6.1e-10 68.2 88 43.2
Hma1.2p1_0549F.1_g176970 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 6.1e-10 68.2 84 41.7
CBR_g19683 Chara braunii HOM05D004569 ORTHO05D005333 3.3e-08 62.4 90 38.9
Lj6C645G5 Lonicera japonica HOM05D004569 ORTHO05D005333 3.3e-08 62.4 143 32.2
arahy.Tifrunner.gnm1.ann1.X16KG5 Arachis hypogaea HOM05D049781 ORTHO05D083800 4.4e-08 62.0 34 88.2
SEGI_07191 Sequoiadendron giganteum HOM05D004569 ORTHO05D005333 5.7e-08 61.6 71 42.3
SalBow2G3500 Salvia bowleyana HOM05D000011 ORTHO05D000018 9.7e-08 60.8 43 65.1
vmacro08367 Vaccinium macrocarpon HOM05D004569 ORTHO05D005333 4.8e-07 58.5 136 35.3
A06p29750 Brassica napus HOM05D004569 ORTHO05D005333 4.1e-06 55.5 40 62.5


User provided reference genes

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