Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.RANL81 Arachis hypogaea HOM05D003886 ORTHO05D004587 2.5e-75 285.4 150 100.0
arahy.Tifrunner.gnm1.ann1.Z0Z3SY Arachis hypogaea HOM05D003886 ORTHO05D004587 1.4e-54 216.5 168 75.6
arahy.Tifrunner.gnm1.ann1.6KK5MR Arachis hypogaea HOM05D003886 ORTHO05D004587 7.1e-46 187.6 136 80.1
arahy.Tifrunner.gnm1.ann1.F9GSXH Arachis hypogaea HOM05D003886 ORTHO05D019782 7.8e-45 184.1 143 72.7
Glyma.19G049500 Glycine max HOM05D003886 ORTHO05D004587 3.0e-36 155.6 155 57.4
TPR.G6290 Trifolium pratense HOM05D003886 ORTHO05D004587 3.0e-36 155.6 156 60.9
Lj2g0000910 Lotus japonicus HOM05D003886 ORTHO05D004587 3.9e-36 155.2 155 59.4
arahy.Tifrunner.gnm1.ann1.EDPG13 Arachis hypogaea HOM05D003961 ORTHO05D038865 7.4e-35 151.0 109 76.1
Glyma.13G045600 Glycine max HOM05D003886 ORTHO05D004587 7.4e-35 151.0 155 57.4
Ca_17750_v3 Cicer arietinum L. HOM05D003886 ORTHO05D004587 1.6e-34 149.8 156 59.0
Phvul.004G065600 Phaseolus vulgaris HOM05D003886 ORTHO05D004587 4.8e-34 148.3 154 57.8
VMungo0464G1314 Vigna mungo HOM05D003886 ORTHO05D004587 6.2e-34 147.9 155 57.4
Lalb_Chr21g0317801 Lupinus albus HOM05D003886 ORTHO05D004587 1.8e-33 146.4 155 56.1
Medtr8g090035 Medicago truncatula HOM05D003886 ORTHO05D004587 4.0e-33 145.2 155 56.8
Psat7g057280 Pisum sativum HOM05D003886 ORTHO05D004587 4.0e-33 145.2 156 57.7
arahy.Tifrunner.gnm1.ann1.K7FQ1R Arachis hypogaea HOM05D003886 ORTHO05D019782 5.3e-33 144.8 129 70.5
Cfa002157 Carpinus fangiana HOM05D003886 ORTHO05D004587 9.9e-32 140.6 154 53.2
Lalb_Chr04g0257491 Lupinus albus HOM05D003886 ORTHO05D004587 9.9e-32 140.6 153 53.6
MD09G1170200 Malus domestica HOM05D003886 ORTHO05D004587 1.7e-31 139.8 154 55.2
TWI12G0365 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 1.7e-31 139.8 154 54.5
Prupe.3G028400 Prunus persica HOM05D003886 ORTHO05D004587 2.2e-31 139.4 154 54.5
QL05p085089 Quercus lobata HOM05D003886 ORTHO05D004587 3.8e-31 138.7 154 52.6
Duzib235G0758 Durio zibethinus HOM05D003886 ORTHO05D004587 1.1e-30 137.1 154 55.2
Thecc.06G049000 Theobroma cacao HOM05D003886 ORTHO05D004587 1.9e-30 136.3 154 55.2
TWI75G0340 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 4.2e-30 135.2 154 54.5
MD17G1156900 Malus domestica HOM05D003886 ORTHO05D004587 5.5e-30 134.8 154 53.2
CiPaw.01G092000 Carya illinoinensis HOM05D003886 ORTHO05D004587 1.6e-29 133.3 154 52.6
Gohir.A10G000800 Gossypium hirsutum HOM05D003886 ORTHO05D004587 2.1e-29 132.9 154 53.9
Gohir.D10G001000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 2.1e-29 132.9 154 53.9
Gorai.011G001300 Gossypium raimondii HOM05D003886 ORTHO05D004587 2.1e-29 132.9 154 53.9
Dinv30973 Davidia involucrata HOM05D003886 ORTHO05D004587 3.5e-29 132.1 154 53.2
Atru.chr3.1841 Acer truncatum HOM05D003886 ORTHO05D004587 6.0e-29 131.3 154 51.9
Lalb_Chr06g0174541 Lupinus albus HOM05D003886 ORTHO05D004587 7.9e-29 131.0 153 52.3
Potri.014G000600 Populus trichocarpa HOM05D003886 ORTHO05D004587 1.0e-28 130.6 154 53.9
Dinv24535 Davidia involucrata HOM05D003886 ORTHO05D004587 2.3e-28 129.4 154 51.3
FAN09G1502 Fragaria x ananassa HOM05D003886 ORTHO05D004587 2.3e-28 129.4 154 53.2
FAN05G1128 Fragaria x ananassa HOM05D003886 ORTHO05D004587 3.9e-28 128.6 154 53.2
Manes.15G112100 Manihot esculenta HOM05D003886 ORTHO05D004587 3.9e-28 128.6 154 51.9
Manes.03G095300 Manihot esculenta HOM05D003886 ORTHO05D004587 5.1e-28 128.3 154 53.2
Sabra14G0003200 Salix brachista HOM05D003886 ORTHO05D004587 5.1e-28 128.3 154 53.2
GSVIVG01000280001 Vitis vinifera HOM05D003886 ORTHO05D004587 1.1e-27 127.1 154 51.3
CSS0041623 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 1.9e-27 126.3 155 51.6
CANSAT01G1565 Cannabis sativa HOM05D003886 ORTHO05D004587 2.5e-27 125.9 154 50.6
FvH4_6g36310 Fragaria vesca HOM05D003886 ORTHO05D004587 3.3e-27 125.6 154 52.6
FAN14G1097 Fragaria x ananassa HOM05D003886 ORTHO05D004587 3.3e-27 125.6 154 52.6
FAN14G2559 Fragaria x ananassa HOM05D003886 ORTHO05D004587 3.3e-27 125.6 154 52.6
Actinidia17720 Actinidia chinensis HOM05D003886 ORTHO05D004587 4.3e-27 125.2 154 51.9
CSS0008969 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 4.3e-27 125.2 154 51.3
Ciclev10020009m.g Citrus clementina HOM05D003886 ORTHO05D004587 4.3e-27 125.2 154 51.3
Ciclev10021199m.g Citrus clementina HOM05D003886 ORTHO05D004587 4.3e-27 125.2 154 51.3
Actinidia11710 Actinidia chinensis HOM05D003886 ORTHO05D004587 2.1e-26 122.9 154 48.7
MELO3C015232.2 Cucumis melo HOM05D003886 ORTHO05D004587 6.2e-26 121.3 154 50.0
MSTRG.27896 Avicennia marina HOM05D003886 ORTHO05D004587 8.2e-26 120.9 154 50.6
Rhsim11G0111800 Rhododendron simsii HOM05D003886 ORTHO05D004587 1.1e-25 120.6 153 51.0
RcHm_v2.0_Chr2g0148321 Rosa chinensis HOM05D003886 ORTHO05D004587 1.8e-25 119.8 154 52.6
Duzib192G0492 Durio zibethinus HOM05D003886 ORTHO05D004587 2.4e-25 119.4 154 50.6
CsaV3_1G038140 Cucumis sativus L. HOM05D003886 ORTHO05D004587 4.0e-25 118.6 154 48.7
Cc02_g36820 Coffea canephora HOM05D003886 ORTHO05D004587 5.3e-25 118.2 154 50.6
TAR624G0406 Trochodendron aralioides HOM05D003886 ORTHO05D004587 6.9e-25 117.9 153 51.0
Migut.N00997 Erythranthe guttata HOM05D003886 ORTHO05D004587 9.0e-25 117.5 154 49.4
MBI14_g11787_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 9.0e-25 117.5 153 47.7
ClCG03G018020 Citrullus lanatus HOM05D003886 ORTHO05D004587 1.2e-24 117.1 168 45.2
vmacro01641 Vaccinium macrocarpon HOM05D003886 ORTHO05D004587 1.5e-24 116.7 153 49.7
Nn7g35782 Nelumbo nucifera HOM05D003886 ORTHO05D004587 3.4e-24 115.5 150 48.7
THA.LOC104808112 Tarenaya hassleriana HOM05D003886 ORTHO05D004587 3.4e-24 115.5 154 49.4
DCAR_022329 Daucus carota HOM05D003886 ORTHO05D004587 5.8e-24 114.8 154 51.3
Lj5C312G11 Lonicera japonica HOM05D003886 ORTHO05D004587 7.6e-24 114.4 159 47.8
HanXRQChr17g0570801 Helianthus annuus HOM05D003886 ORTHO05D004587 1.3e-23 113.6 153 52.3
arahy.Tifrunner.gnm1.ann1.6Q3TNQ Arachis hypogaea HOM05D000799 ORTHO05D000629 2.9e-23 112.5 93 63.4
Eucgr.F04066 Eucalyptus grandis HOM05D003886 ORTHO05D004587 2.9e-23 112.5 154 48.1
Cpa.g.sc10.19 Carica papaya HOM05D003886 ORTHO05D004587 8.4e-23 110.9 129 51.2
Sed0016198 Sechium edule HOM05D003886 ORTHO05D004587 1.1e-22 110.5 154 47.4
Sp5g34070 Schrenkiella parvula HOM05D003886 ORTHO05D004587 3.2e-22 109.0 152 48.7
Oeu061917.1 Olea europaea HOM05D003886 ORTHO05D004587 4.2e-22 108.6 154 45.5
TAR626G1553 Trochodendron aralioides HOM05D003886 ORTHO05D004587 7.1e-22 107.8 153 47.1
MSTRG.5179 Avicennia marina HOM05D003886 ORTHO05D004587 1.2e-21 107.1 153 47.1
Aa31LG4G1970 Aethionema arabicum HOM05D003886 ORTHO05D004587 2.1e-21 106.3 155 46.5
Lsat_1_v5_gn_3_52161 Lactuca sativa HOM05D003886 ORTHO05D004587 2.1e-21 106.3 158 46.2
Peaxi162Scf00198g01528 Petunia axillaris HOM05D003886 ORTHO05D004587 2.1e-21 106.3 156 45.5
SGA_v2.0_scaffold8G04472 Striga asiatica HOM05D003886 ORTHO05D004587 2.1e-21 106.3 163 46.6
Thhalv10018536m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 3.5e-21 105.5 156 47.4
BcaC08g47466 Brassica carinata HOM05D003886 ORTHO05D004587 4.6e-21 105.1 156 46.2
BolC6t40307H Brassica oleracea HOM05D003886 ORTHO05D004587 4.6e-21 105.1 156 46.2
HanXRQChr17g0545561 Helianthus annuus HOM05D003886 ORTHO05D004587 4.6e-21 105.1 155 49.0
BraA07t31924Z Brassica rapa HOM05D003886 ORTHO05D004587 6.0e-21 104.8 156 46.2
Solyc02g032300.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 1.0e-20 104.0 156 44.2
Sopen02g010650 Solanum pennellii HOM05D003886 ORTHO05D004587 1.0e-20 104.0 156 44.2
COL.COLO4_26802 Corchorus olitorius HOM05D003886 ORTHO05D004587 1.3e-20 103.6 151 47.0
Haze_16249 Corylus avellana HOM05D003886 ORTHO05D004587 1.3e-20 103.6 176 39.8
A07p44160 Brassica napus HOM05D003886 ORTHO05D004587 3.0e-20 102.4 156 44.9
BcaB02g07192 Brassica carinata HOM05D003886 ORTHO05D004587 3.9e-20 102.1 157 45.2
CAN.G809.69 Capsicum annuum HOM05D003886 ORTHO05D004587 5.1e-20 101.7 154 43.5
EL10Ac9g21865 Beta vulgaris HOM05D003886 ORTHO05D004587 6.7e-20 101.3 150 45.3
AUR62016582 Chenopodium quinoa HOM05D003886 ORTHO05D004587 8.7e-20 100.9 154 45.5
BcaC08g45391 Brassica carinata HOM05D003886 ORTHO05D004587 1.5e-19 100.1 157 45.2
C06p30220 Brassica napus HOM05D003886 ORTHO05D004587 1.5e-19 100.1 157 45.2
BolC6t38185H Brassica oleracea HOM05D003886 ORTHO05D004587 1.5e-19 100.1 157 45.2
AUR62011474 Chenopodium quinoa HOM05D003886 ORTHO05D004587 1.5e-19 100.1 154 44.8
Peaxi162Scf00048g01418 Petunia axillaris HOM05D003886 ORTHO05D004587 1.5e-19 100.1 155 42.6
PGR102G2920 Punica granatum HOM05D003886 ORTHO05D004587 1.5e-19 100.1 152 46.7
BraA07t30377Z Brassica rapa HOM05D003886 ORTHO05D004587 1.9e-19 99.8 157 45.2
Nn8g38501 Nelumbo nucifera HOM05D003886 ORTHO05D004587 1.9e-19 99.8 142 47.9
Carub.0001s1642 Capsella rubella HOM05D003886 ORTHO05D004587 2.5e-19 99.4 156 50.0
A07p27360 Brassica napus HOM05D003886 ORTHO05D004587 5.7e-19 98.2 154 45.5
C06p52890 Brassica napus HOM05D003886 ORTHO05D004587 5.7e-19 98.2 157 45.2
unitig_699.g19834 Utricularia gibba HOM05D003886 ORTHO05D004587 5.7e-19 98.2 150 44.0
Sc24g0001760 Simmondsia chinensis HOM05D003886 ORTHO05D004587 7.4e-19 97.8 140 46.4
ECA234G0089 Erigeron canadensis HOM05D003886 ORTHO05D004587 9.7e-19 97.4 153 46.4
Nitab4.5_0013482g0010 Nicotiana tabacum HOM05D003886 ORTHO05D004587 9.7e-19 97.4 147 43.5
AT1G79020 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 1.3e-18 97.1 156 44.9
AL2G39480 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 1.6e-18 96.7 156 44.9
Thhalv10007658m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 1.6e-18 96.7 156 48.1
PGSC0003DMG400017734 Solanum tuberosum HOM05D003886 ORTHO05D004587 1.6e-18 96.7 155 43.9
Sopen02g026260 Solanum pennellii HOM05D003886 ORTHO05D004587 3.7e-18 95.5 155 43.2
AT1G16690 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 4.8e-18 95.1 156 47.4
Nitab4.5_0006794g0050 Nicotiana tabacum HOM05D003886 ORTHO05D004587 6.3e-18 94.7 147 42.9
Carub.0002s2589 Capsella rubella HOM05D003886 ORTHO05D004587 1.1e-17 94.0 156 44.2
Solyc02g081650.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 1.4e-17 93.6 155 43.2
BraA02t07251Z Brassica rapa HOM05D003886 ORTHO05D004587 5.3e-17 91.7 157 45.9
CARHR017150 Cardamine hirsuta HOM05D003886 ORTHO05D004587 5.3e-17 91.7 157 45.9
AL1G28850 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 6.9e-17 91.3 156 46.8
C02p36140 Brassica napus HOM05D003886 ORTHO05D004587 6.9e-17 91.3 157 45.2
Sp1g14830 Schrenkiella parvula HOM05D003886 ORTHO05D004587 6.9e-17 91.3 156 45.5
A02p22460 Brassica napus HOM05D003886 ORTHO05D004587 9.0e-17 90.9 157 44.6
BcaC03g15859 Brassica carinata HOM05D003886 ORTHO05D004587 2.6e-16 89.4 157 44.6
CDE06G2124 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 2.6e-16 89.4 114 50.0
PSO782G4625 Papaver somniferum HOM05D003886 ORTHO05D004587 3.4e-16 89.0 154 42.9
Zm00001eb097400 Zea mays HOM05D003886 ORTHO05D004587 3.4e-16 89.0 156 42.3
Zm00001eb308950 Zea mays HOM05D003886 ORTHO05D004587 4.5e-16 88.6 148 42.6
BolC2t09627H Brassica oleracea HOM05D003886 ORTHO05D004587 5.9e-16 88.2 157 43.9
Oeu000173.4 Olea europaea HOM05D003886 ORTHO05D004587 5.9e-16 88.2 234 32.1
PSO063G1610 Papaver somniferum HOM05D003886 ORTHO05D004587 5.9e-16 88.2 155 43.9
ATR0626G209 Amborella trichopoda HOM05D003886 ORTHO05D004587 1.0e-15 87.4 153 40.5
Ah.01g020350 Amaranthus hybridus HOM05D003886 ORTHO05D004587 2.2e-15 86.3 153 38.6
CDE03G0037 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 2.1e-13 79.7 100 52.0
HPP92_015734 Vanilla planifolia HOM05D003886 ORTHO05D004587 6.1e-13 78.2 152 37.5
Os08g0338900 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 1.8e-12 76.6 153 41.2
arahy.Tifrunner.gnm1.ann1.78GTJP Arachis hypogaea HOM05D003886 ORTHO05D004587 8.8e-12 74.3 72 68.1
ATR0751G140 Amborella trichopoda HOM05D003886 ORTHO05D004587 1.5e-11 73.6 119 44.5
CAN.G1586.1 Capsicum annuum HOM05D003886 ORTHO05D004587 5.7e-11 71.6 152 37.5
CDE02G1355 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 1.7e-10 70.1 155 34.8
Aqoxy6G00358 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 2.8e-10 69.3 126 42.1
SMO367G1242 Selaginella moellendorffii HOM05D003886 ORTHO05D004587 6.3e-10 68.2 85 54.1
SHI31130 Sapria himalayana HOM05D003886 ORTHO05D004587 1.1e-09 67.4 154 38.3
AagrBONN_evm.TU.Sc2ySwM_228.1694 Anthoceros agrestis HOM05D003886 ORTHO05D004587 2.6e-08 62.8 165 34.5
Oeu010600.1 Olea europaea HOM05D003886 ORTHO05D004587 2.6e-08 62.8 154 34.4
Mapoly0014s0003 Marchantia polymorpha HOM05D003886 ORTHO05D004587 8.5e-07 57.8 100 42.0
ECA246G0124 Erigeron canadensis HOM05D003886 ORTHO05D004587 1.4e-06 57.0 153 35.3


User provided reference genes

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