Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 9.2e-115 417.2 251 100.0
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 4.6e-106 388.3 244 98.0
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 1.4e-99 366.7 241 89.2
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.4e-86 322.8 197 90.9
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 1.5e-85 320.1 225 93.3
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 5.4e-83 311.6 244 71.7
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 1.1e-80 303.9 224 75.4
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 1.1e-80 303.9 224 75.4
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 3.3e-80 302.4 221 76.5
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 9.6e-80 300.8 244 66.4
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 6.2e-79 298.1 247 65.6
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 2.4e-78 296.2 243 70.0
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 3.1e-78 295.8 223 74.4
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 1.1e-72 277.3 222 71.6
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 3.3e-72 275.8 187 79.1
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 3.7e-71 272.3 226 72.1
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 1.1e-70 270.8 184 76.1
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 2.4e-70 269.6 221 69.7
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 1.2e-69 267.3 220 69.5
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 7.6e-69 264.6 221 67.9
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 1.7e-68 263.5 222 68.5
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 3.8e-68 262.3 245 62.9
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 8.4e-68 261.2 225 68.4
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 3.2e-67 259.2 224 68.3
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 4.2e-67 258.8 222 71.6
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 5.5e-67 258.5 247 64.0
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 2.1e-66 256.5 226 67.3
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 4.6e-66 255.4 221 65.6
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 1.3e-65 253.8 245 63.7
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 8.7e-65 251.1 220 64.5
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 8.7e-65 251.1 221 64.3
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 8.7e-65 251.1 219 64.8
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 1.1e-64 250.8 223 66.4
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.5e-64 250.4 221 64.3
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.5e-64 250.4 221 64.3
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 4.3e-64 248.8 221 64.7
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 5.7e-64 248.4 221 66.5
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 1.3e-63 247.3 226 65.5
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 1.6e-63 246.9 225 62.7
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 2.8e-63 246.1 229 65.9
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 8.2e-63 244.6 223 64.1
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 1.1e-62 244.2 221 62.4
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 1.1e-62 244.2 223 66.8
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 2.4e-62 243.0 245 62.0
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 2.4e-62 243.0 220 65.9
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 5.3e-62 241.9 226 65.9
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 6.9e-62 241.5 223 64.1
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 9.0e-62 241.1 223 63.7
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 1.2e-61 240.7 225 63.1
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.2e-61 240.7 220 58.2
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 1.2e-61 240.7 226 65.5
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 1.2e-61 240.7 223 64.1
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 2.0e-61 240.0 220 65.5
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 2.0e-61 240.0 224 63.4
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 2.6e-61 239.6 225 62.7
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 1.7e-60 236.9 224 62.9
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.9e-60 236.1 219 61.6
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 3.8e-60 235.7 222 63.1
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 8.5e-60 234.6 225 61.8
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 8.5e-60 234.6 225 61.8
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 8.5e-60 234.6 225 61.8
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 1.1e-59 234.2 221 65.6
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 1.1e-59 234.2 223 66.4
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 1.4e-59 233.8 222 61.3
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 1.4e-59 233.8 227 62.6
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 2.1e-58 229.9 225 61.3
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 2.7e-58 229.6 224 62.5
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 4.6e-58 228.8 225 60.4
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 8.8e-57 224.6 226 60.6
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 1.5e-56 223.8 247 57.5
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 4.3e-56 222.2 186 63.4
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 5.7e-56 221.9 129 96.1
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 7.4e-56 221.5 222 59.5
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 1.3e-55 220.7 191 64.4
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 2.8e-55 219.5 252 54.4
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 2.4e-54 216.5 221 56.1
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 2.0e-53 213.4 225 56.9
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 3.4e-53 212.6 221 57.9
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 2.9e-52 209.5 240 58.8
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 3.8e-52 209.1 218 58.3
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.1e-50 203.4 220 55.9
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 2.7e-50 203.0 250 54.8
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 1.8e-49 200.3 220 56.4
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 1.1e-48 197.6 184 58.7
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 7.4e-48 194.9 179 63.1
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 1.7e-47 193.7 218 58.3
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 2.2e-47 193.4 225 54.2
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 2.8e-47 193.0 221 58.4
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 8.2e-47 191.4 224 50.9
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 5.3e-46 188.7 220 54.1
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 3.5e-45 186.0 222 53.6
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 1.0e-44 184.5 221 57.0
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 2.9e-44 183.0 182 56.6
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 2.9e-44 183.0 182 55.5
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 1.9e-43 180.3 155 62.6
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 2.5e-43 179.9 222 51.4
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 7.5e-40 168.3 223 55.6
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 1.1e-38 164.5 220 50.0
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 2.7e-37 159.8 221 46.2
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 1.2e-34 151.0 163 59.5
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 5.7e-32 142.1 233 39.9
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 9.8e-32 141.4 223 42.2
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.7e-31 140.6 129 59.7
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 3.7e-31 139.4 223 45.3
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 7.7e-29 131.7 127 51.2
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 1.0e-28 131.3 242 40.9
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.2e-28 130.2 196 50.5
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 6.5e-28 128.6 233 37.3
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 5.5e-27 125.6 118 61.9
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 5.5e-27 125.6 118 61.9
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 5.5e-27 125.6 245 39.2
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.6e-24 116.7 137 53.3
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 2.8e-23 113.2 241 38.6
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 2.0e-16 90.5 156 40.4
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 4.4e-16 89.4 143 39.2
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 1.1e-14 84.7 195 31.3
arahy.Tifrunner.gnm1.ann1.YLS7HT Arachis hypogaea HOM05D006823 ORTHO05D008608 6.6e-12 75.5 43 93.0
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 2.0e-08 63.9 108 38.0
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 1.9e-06 57.4 110 35.5
Cre02.g105287 Chlamydomonas reinhardtii HOM05D004785 ORTHO05D008521 3.2e-06 56.6 65 35.4
Oeu006328.1 Olea europaea HOM05D006753 ORTHO05D008521 5.4e-06 55.8 61 47.5


User provided reference genes

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