Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.R1VLIZ Arachis hypogaea HOM05D012186 ORTHO05D009594 9.3e-160 567.0 326 100.0
arahy.Tifrunner.gnm1.ann1.B291FH Arachis hypogaea HOM05D012186 ORTHO05D009594 3.2e-83 312.8 243 79.0
arahy.Tifrunner.gnm1.ann1.6GCE7S Arachis hypogaea HOM05D001546 ORTHO05D008648 6.0e-58 228.8 239 65.3
arahy.Tifrunner.gnm1.ann1.C9BPX2 Arachis hypogaea HOM05D012186 ORTHO05D009594 5.3e-46 189.1 251 54.2
arahy.Tifrunner.gnm1.ann1.WSWC6G Arachis hypogaea HOM05D012186 ORTHO05D007451 7.2e-43 178.7 159 64.2
arahy.Tifrunner.gnm1.ann1.FD9URB Arachis hypogaea HOM05D012186 ORTHO05D004670 2.5e-27 127.1 73 78.1
arahy.Tifrunner.gnm1.ann1.X1KXE8 Arachis hypogaea HOM05D012186 ORTHO05D009594 3.2e-27 126.7 123 61.0
arahy.Tifrunner.gnm1.ann1.E1C7YQ Arachis hypogaea HOM05D012186 ORTHO05D009594 4.2e-27 126.3 182 46.7
arahy.Tifrunner.gnm1.ann1.537FL1 Arachis hypogaea HOM05D028733 ORTHO05D003163 7.2e-19 99.0 92 56.5
arahy.Tifrunner.gnm1.ann1.YT3XVJ Arachis hypogaea HOM05D012186 ORTHO05D009594 2.7e-18 97.1 118 59.3
arahy.Tifrunner.gnm1.ann1.L89NVK Arachis hypogaea HOM05D012186 ORTHO05D009594 4.7e-18 96.3 150 46.0
arahy.Tifrunner.gnm1.ann1.TSV4G4 Arachis hypogaea HOM05D012186 ORTHO05D009594 2.0e-16 90.9 108 56.5
arahy.Tifrunner.gnm1.ann1.3RP3M7 Arachis hypogaea HOM05D001984 ORTHO05D002057 7.7e-13 79.0 65 60.0
Nn8g39229 Nelumbo nucifera HOM05D000548 ORTHO05D000987 6.8e-09 65.9 43 55.8
Rhsim13G0016300 Rhododendron simsii HOM05D000548 ORTHO05D000987 6.8e-09 65.9 71 42.3
Haze_01254 Corylus avellana HOM05D000548 ORTHO05D000987 8.8e-09 65.5 66 43.9
arahy.Tifrunner.gnm1.ann1.FSF6ET Arachis hypogaea HOM05D003269 ORTHO05D003672 1.5e-08 64.7 82 43.9
CSS0049245 Camellia sinensis var. sinensis HOM05D000548 ORTHO05D000987 2.6e-08 63.9 70 44.3
arahy.Tifrunner.gnm1.ann1.41P0GI Arachis hypogaea HOM05D003542 ORTHO05D004799 1.7e-07 61.2 34 82.4
arahy.Tifrunner.gnm1.ann1.04YXC9 Arachis hypogaea HOM05D028733 ORTHO05D082643 2.8e-07 60.5 29 82.8
MD04G1089200 Malus domestica HOM05D000548 ORTHO05D000987 2.8e-07 60.5 90 32.2
AUR62035360 Chenopodium quinoa HOM05D000548 ORTHO05D000987 3.7e-07 60.1 56 48.2
SalBow6G5393 Salvia bowleyana HOM05D000548 ORTHO05D000987 3.7e-07 60.1 52 50.0
Gohir.A08G072900 Gossypium hirsutum HOM05D000548 ORTHO05D000987 4.8e-07 59.7 72 41.7
GSVIVG01035743001 Vitis vinifera HOM05D000548 ORTHO05D000987 1.4e-06 58.2 68 38.2
Glyma.15G097300 Glycine max HOM05D000548 ORTHO05D000987 1.8e-06 57.8 64 42.2
Cpa.g.sc9.176 Carica papaya HOM05D000548 ORTHO05D000987 2.4e-06 57.4 38 57.9
AT5G18650 Arabidopsis thaliana HOM05D000548 ORTHO05D000987 3.1e-06 57.0 64 43.8
arahy.Tifrunner.gnm1.ann1.ATSC7G Arachis hypogaea HOM05D028733 ORTHO05D082184 3.1e-06 57.0 34 64.7
arahy.Tifrunner.gnm1.ann1.JX4TU4 Arachis hypogaea HOM05D000548 ORTHO05D000987 4.1e-06 56.6 62 46.8
arahy.Tifrunner.gnm1.ann1.WY5R7K Arachis hypogaea HOM05D000548 ORTHO05D000987 4.1e-06 56.6 62 46.8
Phvul.006G162000 Phaseolus vulgaris HOM05D000548 ORTHO05D000987 4.1e-06 56.6 64 42.2
A02p05070 Brassica napus HOM05D000548 ORTHO05D000987 5.4e-06 56.2 63 44.4
Glyma.17G023400 Glycine max HOM05D000548 ORTHO05D000987 5.4e-06 56.2 64 40.6
Glyma.07G250900 Glycine max HOM05D000548 ORTHO05D000987 7.0e-06 55.8 64 39.1
Glyma.13G215600 Glycine max HOM05D000548 ORTHO05D000987 7.0e-06 55.8 64 40.6
Sabra06G0192100 Salix brachista HOM05D000548 ORTHO05D000003 7.0e-06 55.8 69 36.2
AL6G29920 Arabidopsis lyrata HOM05D000548 ORTHO05D000987 9.1e-06 55.5 63 42.9
BraA02t05465Z Brassica rapa HOM05D000548 ORTHO05D000987 9.1e-06 55.5 63 44.4
SalBow2G0530 Salvia bowleyana HOM05D000548 ORTHO05D000987 9.1e-06 55.5 63 41.3


User provided reference genes

Program Settings