Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PL7LDA Arachis hypogaea HOM05D010482 ORTHO05D000385 7.3e-226 786.9 414 100.0
arahy.Tifrunner.gnm1.ann1.465ER6 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.9e-205 719.2 443 88.5
arahy.Tifrunner.gnm1.ann1.CXU7YK Arachis hypogaea HOM05D010482 ORTHO05D000385 5.0e-182 641.3 519 71.9
arahy.Tifrunner.gnm1.ann1.5MEJ54 Arachis hypogaea HOM05D010482 ORTHO05D000385 2.5e-181 639.0 488 75.6
arahy.Tifrunner.gnm1.ann1.U7U33W Arachis hypogaea HOM05D010482 ORTHO05D000385 3.3e-162 575.5 451 73.6
arahy.Tifrunner.gnm1.ann1.HKAM97 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.3e-145 520.4 519 62.2
arahy.Tifrunner.gnm1.ann1.SC3PTI Arachis hypogaea HOM05D010482 ORTHO05D000385 6.8e-139 498.0 502 63.5
arahy.Tifrunner.gnm1.ann1.B5I3IH Arachis hypogaea HOM05D010482 ORTHO05D000385 1.5e-125 453.8 387 69.0
arahy.Tifrunner.gnm1.ann1.LQJ2G8 Arachis hypogaea HOM05D010482 ORTHO05D000385 5.4e-112 408.7 288 82.3
arahy.Tifrunner.gnm1.ann1.U4Z5MQ Arachis hypogaea HOM05D010482 ORTHO05D000385 6.0e-111 405.2 338 70.7
arahy.Tifrunner.gnm1.ann1.8XA8G4 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.0e-70 271.6 219 74.0
arahy.Tifrunner.gnm1.ann1.B5ZI8V Arachis hypogaea HOM05D010482 ORTHO05D000385 2.1e-47 194.1 191 63.9
arahy.Tifrunner.gnm1.ann1.76LV04 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.3e-41 174.9 149 68.5
arahy.Tifrunner.gnm1.ann1.7PGW8X Arachis hypogaea HOM05D010482 ORTHO05D000385 3.7e-36 156.8 259 46.3
arahy.Tifrunner.gnm1.ann1.TBML09 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.9e-32 144.4 123 66.7
arahy.Tifrunner.gnm1.ann1.P9GJ6G Arachis hypogaea HOM05D010482 ORTHO05D000385 3.4e-29 133.7 103 70.9
arahy.Tifrunner.gnm1.ann1.89LLML Arachis hypogaea HOM05D010482 ORTHO05D000385 1.1e-27 128.6 76 86.8
arahy.Tifrunner.gnm1.ann1.KLBV6E Arachis hypogaea HOM05D010482 ORTHO05D000385 2.3e-22 110.9 83 71.1
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 2.3e-22 110.9 320 30.6
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 1.5e-21 108.2 299 30.1
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.8e-21 105.5 290 29.7
Medtr7g027580 Medicago truncatula HOM05D010482 ORTHO05D000385 8.3e-20 102.4 66 68.2
Medtr3g037670 Medicago truncatula HOM05D029643 ORTHO05D020514 3.5e-18 97.1 153 42.5
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 4.5e-18 96.7 275 29.5
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 3.3e-16 90.5 342 25.7
Lj5A265G37 Lonicera japonica HOM05D005763 ORTHO05D005970 3.3e-16 90.5 258 30.6
vmacro21586 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 4.3e-16 90.1 204 32.4
TAR365G0205 Trochodendron aralioides HOM05D000141 ORTHO05D000385 7.3e-16 89.4 246 27.2
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 9.5e-16 89.0 343 25.7
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 1.2e-15 88.6 343 25.7
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 1.6e-15 88.2 342 25.4
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 1.6e-15 88.2 342 25.4
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 2.8e-15 87.4 343 25.4
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.8e-15 87.4 282 26.6
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 2.8e-15 87.4 295 26.4
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 2.8e-15 87.4 290 27.6
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 4.7e-15 86.7 350 26.9
TAR375G0312 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.7e-15 86.7 239 27.6
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 6.1e-15 86.3 274 28.5
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.0e-15 85.9 265 26.8
ECA233G0549 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.4e-14 85.1 273 30.0
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 3.0e-14 84.0 341 29.0
TAR383G0561 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.9e-14 82.4 240 27.9
CSS0000994 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-13 82.0 281 26.0
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-13 82.0 322 24.8
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.5e-13 81.6 330 26.4
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.4e-13 80.5 305 24.9
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 3.4e-13 80.5 307 24.1
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.7e-13 79.7 328 24.4
CANSAT35G0020 Cannabis sativa HOM05D001309 ORTHO05D000385 3.7e-12 77.0 354 25.1
EL10Ac2g02894 Beta vulgaris HOM05D004615 ORTHO05D000385 1.1e-11 75.5 218 28.4
AUR62032537 Chenopodium quinoa HOM05D009343 ORTHO05D011970 1.1e-11 75.5 246 28.9
AUR62037174 Chenopodium quinoa HOM05D009343 ORTHO05D000385 1.8e-11 74.7 246 28.9
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.8e-11 74.7 295 24.1
TAR628G0437 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.8e-11 74.7 225 25.8
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 9.2e-11 72.4 305 23.9
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 9.2e-11 72.4 305 23.9
CSS0014937 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-10 72.0 292 24.7
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 1.2e-10 72.0 75 48.0
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 1.2e-10 72.0 75 48.0
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 1.2e-10 72.0 268 27.6
Nitab4.5_0006078g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.6e-10 71.6 216 28.2
AUR62031112 Chenopodium quinoa HOM05D009343 ORTHO05D000385 2.0e-10 71.2 216 28.7
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 3.5e-10 70.5 382 24.1
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 5.9e-10 69.7 328 25.3
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 5.9e-10 69.7 305 23.6
Thecc.02G018900 Theobroma cacao HOM05D005763 ORTHO05D005970 7.8e-10 69.3 63 49.2
Hund24524 Selenicereus undatus HOM05D009682 ORTHO05D000385 1.0e-09 68.9 178 30.9
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-09 68.6 168 31.5
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.3e-09 68.6 332 23.5
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 1.3e-09 68.6 252 25.0
AUR62034499 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.7e-09 68.2 194 29.4
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 1.7e-09 68.2 323 23.2
TWI60G1041 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 1.7e-09 68.2 125 32.0
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 3.0e-09 67.4 71 49.3
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 3.9e-09 67.0 148 34.5
AUR62043436 Chenopodium quinoa HOM05D009343 ORTHO05D000385 5.0e-09 66.6 76 47.4
COL.COLO4_08322 Corchorus olitorius HOM05D004615 ORTHO05D000385 5.0e-09 66.6 219 28.3
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 5.0e-09 66.6 71 49.3
Psat7g143560 Pisum sativum HOM05D008859 ORTHO05D000385 5.0e-09 66.6 71 49.3
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.6e-09 66.2 313 24.0
MBI15_g16946_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.6e-09 65.9 109 38.5
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.1e-08 65.5 271 25.5
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.1e-08 65.5 271 25.5
Ca_04520_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 1.5e-08 65.1 120 34.2
COL.COLO4_15674 Corchorus olitorius HOM05D027546 ORTHO05D020514 1.5e-08 65.1 133 34.6
MBI14_g03116_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.5e-08 65.1 239 22.2
Nn1g07312 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.5e-08 65.1 92 38.0
TAR374G1143 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.5e-08 65.1 250 26.0
vmacro22655 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.5e-08 65.1 386 25.6
CSS0004008 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.9e-08 64.7 285 24.6
Hund24527 Selenicereus undatus HOM05D009682 ORTHO05D000385 1.9e-08 64.7 130 32.3
AUR62022305 Chenopodium quinoa HOM05D009343 ORTHO05D000385 2.5e-08 64.3 77 44.2
ECA164G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 3.3e-08 63.9 254 24.4
MBI10_g17725_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.3e-08 63.9 108 36.1
Os04g0610000 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 3.3e-08 63.9 192 27.6
vmacro00665 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 3.3e-08 63.9 195 31.3
CSS0000056 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.3e-08 63.5 78 41.0
AUR62037964 Chenopodium quinoa HOM05D014060 ORTHO05D000385 4.3e-08 63.5 83 42.2
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.3e-08 63.5 250 26.0
Nn3g21442 Nelumbo nucifera HOM05D001309 ORTHO05D000385 4.3e-08 63.5 69 43.5
Hund07865 Selenicereus undatus HOM05D009682 ORTHO05D000385 4.3e-08 63.5 111 36.0
TWI31G0781 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 5.6e-08 63.2 420 23.8
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.6e-08 63.2 122 32.8
AUR62002779 Chenopodium quinoa HOM05D009343 ORTHO05D000385 7.3e-08 62.8 113 35.4
AUR62027608 Chenopodium quinoa HOM05D014060 ORTHO05D000385 7.3e-08 62.8 116 36.2
Psat0s130g0040 Pisum sativum HOM05D008859 ORTHO05D000385 7.3e-08 62.8 71 46.5
CSS0027143 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.5e-08 62.4 81 38.3
Psat5g082920 Pisum sativum HOM05D008859 ORTHO05D000385 9.5e-08 62.4 71 47.9
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 9.5e-08 62.4 318 23.0
Zm00001eb133410 Zea mays HOM05D002305 ORTHO05D002528 9.5e-08 62.4 245 23.7
CSS0023154 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.6e-07 61.6 78 39.7
CSS0030235 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.6e-07 61.6 101 35.6
AUR62014955 Chenopodium quinoa HOM05D008127 ORTHO05D000385 1.6e-07 61.6 67 46.3
AUR62036502 Chenopodium quinoa HOM05D009343 ORTHO05D011970 2.1e-07 61.2 65 46.2
AUR62042476 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.1e-07 61.2 78 44.9
AUR62042512 Chenopodium quinoa HOM05D014060 ORTHO05D000385 2.1e-07 61.2 116 36.2
TAR472G0003 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.1e-07 61.2 317 22.1
AUR62037264 Chenopodium quinoa HOM05D004615 ORTHO05D000062 2.8e-07 60.8 66 45.5
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 2.8e-07 60.8 67 43.3
Nitab4.5_0002496g0090 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.8e-07 60.8 255 27.5
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.8e-07 60.8 319 22.6
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 3.6e-07 60.5 271 24.0
AUR62025845 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.6e-07 60.5 218 27.1
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 3.6e-07 60.5 73 42.5
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.6e-07 60.5 99 31.3
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 4.7e-07 60.1 364 22.5
MBI06_g41780_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.7e-07 60.1 100 37.0
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.7e-07 60.1 65 41.5
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.7e-07 60.1 252 25.8
AUR62027663 Chenopodium quinoa HOM05D014060 ORTHO05D000385 6.2e-07 59.7 116 35.3
AUR62040355 Chenopodium quinoa HOM05D014060 ORTHO05D000385 6.2e-07 59.7 102 37.3
MBI09_g15192_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.2e-07 59.7 260 24.6
TAR625G1047 Trochodendron aralioides HOM05D009698 ORTHO05D015199 6.2e-07 59.7 234 26.5
DCAR_032097 Daucus carota HOM05D004615 ORTHO05D000385 8.0e-07 59.3 99 36.4
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.0e-07 59.3 280 25.4
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 8.0e-07 59.3 71 42.3
Rhsim11G0005200 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.0e-07 59.3 135 31.9
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.0e-07 59.3 264 22.3
Cpa.g.sc113.47 Carica papaya HOM05D005763 ORTHO05D005970 1.1e-06 58.9 203 26.6
Nitab4.5_0000067g0100 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.1e-06 58.9 253 26.5
AUR62019804 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.4e-06 58.5 103 33.0
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.4e-06 58.5 254 26.4
PGSC0003DMG400041847 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.4e-06 58.5 182 28.6
Zm00001eb029790 Zea mays HOM05D008576 ORTHO05D000385 1.4e-06 58.5 137 26.3
AUR62026468 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.3e-06 57.8 69 43.5
ECA248G3239 Erigeron canadensis HOM05D004615 ORTHO05D000385 2.3e-06 57.8 191 25.7
MBI19_g00149_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.3e-06 57.8 59 44.1
Hund01438 Selenicereus undatus HOM05D004615 ORTHO05D000385 2.3e-06 57.8 64 43.8
TAR376G0246 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.3e-06 57.8 312 21.8
TAR629G2892 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.3e-06 57.8 200 24.5
AUR62013324 Chenopodium quinoa HOM05D010065 ORTHO05D000385 3.1e-06 57.4 62 43.5
AUR62035483 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.1e-06 57.4 226 26.5
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 3.1e-06 57.4 141 30.5
Lj9A299T35 Lonicera japonica HOM05D001309 ORTHO05D000385 3.1e-06 57.4 69 42.0
Lj4g0009512 Lotus japonicus HOM05D001309 ORTHO05D000385 3.1e-06 57.4 61 39.3
Medtr5g061300 Medicago truncatula HOM05D004615 ORTHO05D000385 3.1e-06 57.4 258 25.2
SGA_v2.0_scaffold39G15343 Striga asiatica HOM05D004615 ORTHO05D000385 3.1e-06 57.4 120 35.8
vmacro00660 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 3.1e-06 57.4 196 28.6
Zm00001eb354780 Zea mays HOM05D008576 ORTHO05D000385 3.1e-06 57.4 259 22.0
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 4.0e-06 57.0 312 21.8
CANSAT11G0213 Cannabis sativa HOM05D001309 ORTHO05D000385 5.2e-06 56.6 378 22.2
AUR62010806 Chenopodium quinoa HOM05D004615 ORTHO05D000385 5.2e-06 56.6 101 33.7
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.2e-06 56.6 89 31.5
MBI19_g12820_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.2e-06 56.6 63 41.3
Hund03863 Selenicereus undatus HOM05D009682 ORTHO05D000385 6.8e-06 56.2 114 30.7
CANSAT25G0318 Cannabis sativa HOM05D007314 ORTHO05D010380 8.9e-06 55.8 117 35.9
Nn1g00481 Nelumbo nucifera HOM05D001309 ORTHO05D000385 8.9e-06 55.8 69 39.1
Rhsim11G0004700 Rhododendron simsii HOM05D015585 ORTHO05D000385 8.9e-06 55.8 75 41.3
PGSC0003DMG400004241 Solanum tuberosum HOM05D007930 ORTHO05D007166 8.9e-06 55.8 239 24.3


User provided reference genes

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