Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.PAP2UH Arachis hypogaea HOM05D006419 ORTHO05D008096 1.4e-47 192.6 93 100.0
arahy.Tifrunner.gnm1.ann1.V3JJAU Arachis hypogaea HOM05D006419 ORTHO05D008096 9.8e-46 186.4 91 97.8
Phvul.010G089300 Phaseolus vulgaris HOM05D006419 ORTHO05D008096 4.9e-45 184.1 91 94.5
Lalb_Chr10g0097581 Lupinus albus HOM05D006419 ORTHO05D008096 8.3e-45 183.3 91 95.6
Lalb_Chr17g0340031 Lupinus albus HOM05D006419 ORTHO05D008096 1.1e-44 183.0 91 95.6
Lj1g0008204 Lotus japonicus HOM05D006419 ORTHO05D008096 5.4e-44 180.6 91 94.5
TPR.G17971 Trifolium pratense HOM05D006419 ORTHO05D008096 9.2e-44 179.9 93 94.6
Glyma.07G080100 Glycine max HOM05D006419 ORTHO05D008096 1.6e-43 179.1 91 92.3
Ca_23766_v3 Cicer arietinum L. HOM05D006419 ORTHO05D008096 2.7e-43 178.3 91 93.4
Actinidia31456 Actinidia chinensis HOM05D006419 ORTHO05D008096 2.9e-42 174.9 91 90.1
Medtr8g032860 Medicago truncatula HOM05D006419 ORTHO05D008096 6.6e-42 173.7 93 91.4
TWI59G0287 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 6.6e-42 173.7 91 89.0
Aqoxy7G00481 Aquilegia oxysepala HOM05D006419 ORTHO05D008096 1.5e-41 172.6 91 87.9
CANSAT56G1223 Cannabis sativa HOM05D006419 ORTHO05D008096 1.5e-41 172.6 91 89.0
Manes.01G263100 Manihot esculenta HOM05D006419 ORTHO05D008096 1.5e-41 172.6 91 84.6
Haze_16703 Corylus avellana HOM05D006419 ORTHO05D008096 3.3e-41 171.4 91 86.8
Glyma.03G018600 Glycine max HOM05D006419 ORTHO05D008096 4.3e-41 171.0 91 90.1
Psat4g151440 Pisum sativum HOM05D006419 ORTHO05D008096 4.3e-41 171.0 93 88.2
ClCG06G000160 Citrullus lanatus HOM05D006419 ORTHO05D008096 7.3e-41 170.2 91 86.8
Prupe.1G200200 Prunus persica HOM05D006419 ORTHO05D008096 7.3e-41 170.2 91 85.7
Sp4g27740 Schrenkiella parvula HOM05D006419 ORTHO05D008096 9.5e-41 169.9 91 86.8
Sc23g0003380 Simmondsia chinensis HOM05D006419 ORTHO05D008096 9.5e-41 169.9 91 86.8
Cfa001844 Carpinus fangiana HOM05D006419 ORTHO05D008096 1.2e-40 169.5 91 85.7
Actinidia09582 Actinidia chinensis HOM05D006419 ORTHO05D008096 1.6e-40 169.1 91 86.8
Thhalv10001692m.g Eutrema salsugineum HOM05D006419 ORTHO05D008096 1.6e-40 169.1 91 85.7
CiPaw.01G257500 Carya illinoinensis HOM05D006419 ORTHO05D008096 2.1e-40 168.7 91 87.9
TWI14G0146 Tripterygium wilfordii HOM05D006419 ORTHO05D008096 2.1e-40 168.7 91 86.8
MD04G1046600 Malus domestica HOM05D006419 ORTHO05D008096 2.8e-40 168.3 91 87.9
GSVIVG01027592001 Vitis vinifera HOM05D006419 ORTHO05D008096 3.6e-40 167.9 91 86.8
BcaC01g05111 Brassica carinata HOM05D006419 ORTHO05D008096 4.7e-40 167.5 91 83.5
A03p25320 Brassica napus HOM05D006419 ORTHO05D008096 4.7e-40 167.5 91 83.5
C03p30210 Brassica napus HOM05D006419 ORTHO05D008096 4.7e-40 167.5 91 83.5
BolC3t15370H Brassica oleracea HOM05D006419 ORTHO05D008096 4.7e-40 167.5 91 83.5
BraA03t11736Z Brassica rapa HOM05D006419 ORTHO05D008096 8.0e-40 166.8 91 83.5
Duzib138G0401 Durio zibethinus HOM05D006419 ORTHO05D008096 8.0e-40 166.8 91 83.5
QL08p050901 Quercus lobata HOM05D006419 ORTHO05D008096 8.0e-40 166.8 91 84.6
Rhsim07G0022300 Rhododendron simsii HOM05D006419 ORTHO05D008096 1.0e-39 166.4 92 87.0
Hund16966 Selenicereus undatus HOM05D006419 ORTHO05D008096 1.0e-39 166.4 91 84.6
CARHR140920 Cardamine hirsuta HOM05D006419 ORTHO05D008096 1.4e-39 166.0 91 84.6
Sed0009830 Sechium edule HOM05D006419 ORTHO05D008096 1.8e-39 165.6 91 83.5
AT3G61113 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 2.3e-39 165.2 91 84.6
COL.COLO4_12638 Corchorus olitorius HOM05D006419 ORTHO05D008096 2.3e-39 165.2 91 84.6
FvH4_1g27190 Fragaria vesca HOM05D006419 ORTHO05D008096 2.3e-39 165.2 91 82.4
Hma1.2p1_0132F.1_g060780 Hydrangea macrophylla HOM05D006419 ORTHO05D008096 2.3e-39 165.2 91 84.6
RcHm_v2.0_Chr3g0487581 Rosa chinensis HOM05D006419 ORTHO05D008096 2.3e-39 165.2 91 82.4
AL5G43350 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 3.1e-39 164.9 91 84.6
Hund09553 Selenicereus undatus HOM05D006419 ORTHO05D008096 3.1e-39 164.9 88 87.5
VMungo0331G1339 Vigna mungo HOM05D006419 ORTHO05D008096 3.1e-39 164.9 117 72.6
BcaB01g03257 Brassica carinata HOM05D006419 ORTHO05D008096 4.0e-39 164.5 91 82.4
MELO3C022522.2 Cucumis melo HOM05D006419 ORTHO05D008096 4.0e-39 164.5 91 84.6
Cc02_g37090 Coffea canephora HOM05D006419 ORTHO05D008096 5.2e-39 164.1 91 84.6
MBI04_g28569_MAGBIO Magnolia biondii HOM05D006419 ORTHO05D008096 6.8e-39 163.7 91 82.4
Nn6g34296 Nelumbo nucifera HOM05D006419 ORTHO05D008096 6.8e-39 163.7 91 82.4
Carub.0004s2835 Capsella rubella HOM05D006419 ORTHO05D008096 1.2e-38 162.9 93 83.9
Gohir.D11G088500 Gossypium hirsutum HOM05D006419 ORTHO05D008096 1.2e-38 162.9 91 81.3
Gorai.007G094600 Gossypium raimondii HOM05D006419 ORTHO05D008096 1.2e-38 162.9 91 81.3
THA.LOC104802008 Tarenaya hassleriana HOM05D006419 ORTHO05D008096 1.2e-38 162.9 91 84.6
PGR042G1692 Punica granatum HOM05D006419 ORTHO05D008096 2.0e-38 162.2 91 81.3
AT2G45695 Arabidopsis thaliana HOM05D006419 ORTHO05D008096 3.4e-38 161.4 93 82.8
Gohir.A11G084400 Gossypium hirsutum HOM05D006419 ORTHO05D008096 3.4e-38 161.4 91 81.3
PSO478G5220 Papaver somniferum HOM05D006419 ORTHO05D008096 3.4e-38 161.4 91 84.6
Thecc.01G370100 Theobroma cacao HOM05D006419 ORTHO05D008096 3.4e-38 161.4 91 80.2
TAR375G0946 Trochodendron aralioides HOM05D006419 ORTHO05D008096 3.4e-38 161.4 91 85.7
Ciclev10023026m.g Citrus clementina HOM05D006419 ORTHO05D008096 4.4e-38 161.0 91 83.5
Dinv32413 Davidia involucrata HOM05D006419 ORTHO05D008096 5.8e-38 160.6 91 83.5
ECA236G2030 Erigeron canadensis HOM05D002941 ORTHO05D007802 5.8e-38 160.6 91 83.5
Migut.C01180 Erythranthe guttata HOM05D006419 ORTHO05D008096 5.8e-38 160.6 91 83.5
Duzib133G0791 Durio zibethinus HOM05D006419 ORTHO05D008096 7.5e-38 160.2 91 81.3
Nitab4.5_0001127g0020 Nicotiana tabacum HOM05D006419 ORTHO05D008096 7.5e-38 160.2 91 83.5
Oeu050256.1 Olea europaea HOM05D006419 ORTHO05D008096 7.5e-38 160.2 91 82.4
Dinv43747 Davidia involucrata HOM05D006419 ORTHO05D008096 9.8e-38 159.8 91 84.6
Eucgr.E01325 Eucalyptus grandis HOM05D006419 ORTHO05D008096 9.8e-38 159.8 91 82.4
PSO782G1455 Papaver somniferum HOM05D006419 ORTHO05D008096 9.8e-38 159.8 91 82.4
Nitab4.5_0013229g0010 Nicotiana tabacum HOM05D006419 ORTHO05D008096 1.3e-37 159.5 91 82.4
Oeu032965.1 Olea europaea HOM05D006419 ORTHO05D008096 1.3e-37 159.5 91 82.4
Aa31LG1G27170 Aethionema arabicum HOM05D006419 ORTHO05D008096 1.7e-37 159.1 91 82.4
PGSC0003DMG400000132 Solanum tuberosum HOM05D006419 ORTHO05D008096 1.7e-37 159.1 91 82.4
SGA_v2.0_scaffold24G10498 Striga asiatica HOM05D006419 ORTHO05D008096 1.7e-37 159.1 91 84.6
Lsat_1_v5_gn_8_87621 Lactuca sativa HOM05D006419 ORTHO05D008096 2.2e-37 158.7 91 81.3
MSTRG.25406 Avicennia marina HOM05D006419 ORTHO05D008096 2.9e-37 158.3 91 85.7
HanXRQChr04g0126261 Helianthus annuus HOM05D006419 ORTHO05D008096 2.9e-37 158.3 91 81.3
Potri.014G078200 Populus trichocarpa HOM05D006419 ORTHO05D008096 2.9e-37 158.3 91 83.5
Solyc01g091890.3 Solanum lycopersicum HOM05D006419 ORTHO05D008096 3.7e-37 157.9 91 82.4
Sopen01g037660 Solanum pennellii HOM05D006419 ORTHO05D008096 3.7e-37 157.9 91 82.4
Atru.chr5.383 Acer truncatum HOM05D006419 ORTHO05D008096 4.9e-37 157.5 91 81.3
Peaxi162Scf00021g00237 Petunia axillaris HOM05D006419 ORTHO05D008096 4.9e-37 157.5 91 82.4
Sabra14G0054000 Salix brachista HOM05D006419 ORTHO05D008096 4.9e-37 157.5 91 84.6
TAR636G0701 Trochodendron aralioides HOM05D006419 ORTHO05D008096 6.4e-37 157.1 91 81.3
MSTRG.1480 Avicennia marina HOM05D006419 ORTHO05D008096 1.4e-36 156.0 92 83.7
EL10Ac1g00975 Beta vulgaris HOM05D006419 ORTHO05D008096 2.4e-36 155.2 92 82.6
BcaB06g29431 Brassica carinata HOM05D006419 ORTHO05D008096 7.0e-36 153.7 87 81.6
CsaV3_6G005910 Cucumis sativus L. HOM05D006419 ORTHO05D008096 7.0e-36 153.7 89 79.8
CAN.G170.61 Capsicum annuum HOM05D006419 ORTHO05D008096 4.6e-35 151.0 103 71.8
SalBow8G2260 Salvia bowleyana HOM05D006419 ORTHO05D008096 1.7e-34 149.1 83 86.7
vmacro20977 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 2.3e-34 148.7 91 75.8
SGA_v2.0_scaffold486G52389 Striga asiatica HOM05D006419 ORTHO05D008096 1.9e-33 145.6 89 80.9
CDE11G0029 Ceratophyllum demersum HOM05D006419 ORTHO05D008096 3.6e-32 141.4 91 69.2
vmacro13347 Vaccinium macrocarpon HOM05D006419 ORTHO05D008096 1.4e-31 139.4 97 73.2
ATR0757G048 Amborella trichopoda HOM05D006419 ORTHO05D008096 1.2e-30 136.3 91 67.0
unitig_37.g12884 Utricularia gibba HOM05D006419 ORTHO05D008096 3.4e-30 134.8 82 79.3
Mapoly0004s0131 Marchantia polymorpha HOM05D006419 ORTHO05D008096 1.2e-27 126.3 91 65.9
AL4G44870 Arabidopsis lyrata HOM05D006419 ORTHO05D008096 3.5e-27 124.8 73 83.6
SEGI_03184 Sequoiadendron giganteum HOM05D006419 ORTHO05D008096 3.9e-26 121.3 89 60.7
HPP92_022119 Vanilla planifolia HOM05D006419 ORTHO05D008096 5.1e-26 120.9 84 66.7
AagrBONN_evm.TU.Sc2ySwM_228.3881 Anthoceros agrestis HOM05D006419 ORTHO05D008096 2.5e-25 118.6 92 58.7
Pp3c15_11080 Physcomitrium patens HOM05D006419 ORTHO05D008096 3.3e-25 118.2 91 61.5
FAN19G0283 Fragaria x ananassa HOM05D006419 ORTHO05D008096 4.7e-24 114.4 61 83.6
Carub.0005s2776 Capsella rubella HOM05D006419 ORTHO05D008096 8.1e-24 113.6 58 91.4
Cre10.g426000 Chlamydomonas reinhardtii HOM05D006419 ORTHO05D008096 1.1e-23 113.2 91 50.5
Ah.15g094110 Amaranthus hybridus HOM05D006419 ORTHO05D008096 2.3e-23 112.1 84 69.0
PSO782G2080 Papaver somniferum HOM05D006419 ORTHO05D008096 4.0e-23 111.3 57 86.0
A04p33960 Brassica napus HOM05D006419 ORTHO05D008096 1.5e-22 109.4 61 83.6
FAN23G1662 Fragaria x ananassa HOM05D006419 ORTHO05D008096 4.4e-22 107.8 56 83.9
FAN28G0164 Fragaria x ananassa HOM05D006419 ORTHO05D008096 4.9e-21 104.4 57 80.7
PRCOL_00003278 Prasinoderma coloniale HOM05D006419 ORTHO05D008096 7.8e-19 97.1 91 51.6
CSS0035991 Camellia sinensis var. sinensis HOM05D006419 ORTHO05D008096 1.3e-18 96.3 53 83.0
SMO367G0935 Selaginella moellendorffii HOM05D006419 ORTHO05D008096 5.1e-18 94.4 83 53.0
FAN28G1401 Fragaria x ananassa HOM05D006419 ORTHO05D008096 1.5e-17 92.8 65 67.7
Zm00001eb320180 Zea mays HOM05D006419 ORTHO05D008096 3.8e-13 78.2 62 64.5
Haze_27740 Corylus avellana HOM05D006419 ORTHO05D008096 4.9e-13 77.8 89 41.6
BraA04t18857Z Brassica rapa HOM05D006419 ORTHO05D008096 1.6e-11 72.8 43 76.7
Dinv28502 Davidia involucrata HOM05D000001 ORTHO05D000003 5.1e-10 67.8 43 67.4
Gohir.D11G088350 Gossypium hirsutum HOM05D006419 ORTHO05D008096 3.1e-07 58.5 38 68.4


User provided reference genes

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