Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.LAP5IF Arachis hypogaea HOM05D007054 ORTHO05D008888 7.2e-130 467.2 234 100.0
arahy.Tifrunner.gnm1.ann1.M7JB84 Arachis hypogaea HOM05D007054 ORTHO05D008888 1.1e-122 443.4 234 94.4
Phvul.003G012100 Phaseolus vulgaris HOM05D007054 ORTHO05D008888 1.7e-91 339.7 244 72.5
Lj2g0019135 Lotus japonicus HOM05D007054 ORTHO05D008888 3.0e-91 339.0 239 72.4
Ca_12472_v3 Cicer arietinum L. HOM05D007054 ORTHO05D008888 3.1e-88 328.9 213 76.5
Lalb_Chr01g0013331 Lupinus albus HOM05D007054 ORTHO05D008888 8.4e-86 320.9 240 70.0
Glyma.20G009500 Glycine max HOM05D007054 ORTHO05D008888 2.1e-84 316.2 214 74.8
Glyma.07G179400 Glycine max HOM05D007054 ORTHO05D008888 3.5e-84 315.5 213 75.1
Medtr1g034050 Medicago truncatula HOM05D007054 ORTHO05D008888 8.7e-83 310.8 232 71.1
TPR.G11147 Trifolium pratense HOM05D007054 ORTHO05D008888 1.9e-82 309.7 213 74.2
Psat6g096080 Pisum sativum HOM05D007054 ORTHO05D008888 4.5e-79 298.5 239 65.7
CiPaw.05G055500 Carya illinoinensis HOM05D007054 ORTHO05D008888 3.9e-75 285.4 234 63.2
Haze_01879 Corylus avellana HOM05D007054 ORTHO05D008888 2.8e-73 279.3 238 60.9
CSS0047307 Camellia sinensis var. sinensis HOM05D007054 ORTHO05D008888 9.0e-72 274.2 200 68.0
Nitab4.5_0001401g0040 Nicotiana tabacum HOM05D007054 ORTHO05D008888 1.5e-71 273.5 228 59.2
QL11p038609 Quercus lobata HOM05D007054 ORTHO05D008888 1.5e-71 273.5 232 60.8
Dinv42118 Davidia involucrata HOM05D007054 ORTHO05D008888 2.6e-71 272.7 224 63.8
Duzib132G1179 Durio zibethinus HOM05D007054 ORTHO05D008888 2.6e-71 272.7 240 57.9
Hma1.2p1_1543F.1_g289790 Hydrangea macrophylla HOM05D007054 ORTHO05D008888 5.8e-71 271.6 225 60.4
Nitab4.5_0003726g0060 Nicotiana tabacum HOM05D007054 ORTHO05D008888 8.4e-70 267.7 228 58.8
Gorai.008G026400 Gossypium raimondii HOM05D007054 ORTHO05D008888 1.1e-69 267.3 237 57.4
Ciclev10029145m.g Citrus clementina HOM05D007054 ORTHO05D008888 1.4e-69 266.9 181 67.4
Thecc.02G095100 Theobroma cacao HOM05D007054 ORTHO05D008888 1.9e-69 266.5 239 56.9
Cfa005418 Carpinus fangiana HOM05D007054 ORTHO05D008888 3.2e-69 265.8 227 60.4
Gohir.A12G026500 Gossypium hirsutum HOM05D007054 ORTHO05D008888 5.5e-69 265.0 237 57.0
Gohir.D12G026100 Gossypium hirsutum HOM05D007054 ORTHO05D008888 1.2e-68 263.8 237 57.0
Oeu021925.1 Olea europaea HOM05D007054 ORTHO05D008888 6.0e-68 261.5 180 66.1
Solyc01g108650.3 Solanum lycopersicum HOM05D007054 ORTHO05D008888 6.0e-68 261.5 200 62.5
Sopen01g050870 Solanum pennellii HOM05D007054 ORTHO05D008888 6.0e-68 261.5 205 61.0
Atru.chr5.2831 Acer truncatum HOM05D007054 ORTHO05D008888 1.3e-67 260.4 227 59.5
PGSC0003DMG400025902 Solanum tuberosum HOM05D007054 ORTHO05D008888 1.3e-67 260.4 207 59.9
MD00G1050600 Malus domestica HOM05D007054 ORTHO05D008888 1.8e-67 260.0 244 55.7
Migut.N01207 Erythranthe guttata HOM05D007054 ORTHO05D008888 2.3e-67 259.6 199 61.3
Peaxi162Scf00016g01532 Petunia axillaris HOM05D007054 ORTHO05D008888 3.9e-67 258.8 225 58.2
TWI79G0983 Tripterygium wilfordii HOM05D007054 ORTHO05D008888 6.7e-67 258.1 176 68.8
CANSAT25G2549 Cannabis sativa HOM05D007054 ORTHO05D008888 1.1e-66 257.3 174 66.7
PGR142G2758 Punica granatum HOM05D007054 ORTHO05D008888 1.1e-66 257.3 188 66.0
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 1.5e-66 256.9 190 62.6
MSTRG.5374 Avicennia marina HOM05D007054 ORTHO05D008888 2.5e-66 256.1 175 66.3
SalBow3G3466 Salvia bowleyana HOM05D007054 ORTHO05D008888 3.3e-66 255.8 213 56.3
MELO3C018427.2 Cucumis melo HOM05D007054 ORTHO05D008888 5.6e-66 255.0 189 63.0
Prupe.8G115700 Prunus persica HOM05D007054 ORTHO05D008888 5.6e-66 255.0 195 62.1
CAN.G322.40 Capsicum annuum HOM05D007054 ORTHO05D008888 7.4e-66 254.6 192 62.0
THA.LOC104798802 Tarenaya hassleriana HOM05D007054 ORTHO05D008888 1.3e-65 253.8 201 58.7
Manes.15G143900 Manihot esculenta HOM05D007054 ORTHO05D008888 2.1e-65 253.1 233 56.2
ClCG02G005650 Citrullus lanatus HOM05D007054 ORTHO05D008888 4.8e-65 251.9 203 59.6
RcHm_v2.0_Chr6g0259351 Rosa chinensis HOM05D007054 ORTHO05D008888 1.1e-64 250.8 196 61.7
Sabra04G0096600 Salix brachista HOM05D007054 ORTHO05D008888 1.4e-64 250.4 230 59.6
GSVIVG01031807001 Vitis vinifera HOM05D007054 ORTHO05D008888 1.8e-64 250.0 189 63.5
FAN15G2151 Fragaria x ananassa HOM05D007054 ORTHO05D008888 4.0e-64 248.8 232 58.2
Potri.004G145600 Populus trichocarpa HOM05D007054 ORTHO05D008888 2.0e-63 246.5 230 58.3
Oeu057672.1 Olea europaea HOM05D007054 ORTHO05D008888 7.6e-63 244.6 177 63.8
SGA_v2.0_scaffold9G04688 Striga asiatica HOM05D007054 ORTHO05D008888 1.0e-62 244.2 184 61.4
ECA234G0688 Erigeron canadensis HOM05D007054 ORTHO05D008888 2.2e-62 243.0 210 57.6
TAR625G1358 Trochodendron aralioides HOM05D007054 ORTHO05D008888 2.9e-62 242.7 228 56.6
Aa31LG10G4480 Aethionema arabicum HOM05D007054 ORTHO05D008888 6.5e-62 241.5 217 53.0
FvH4_2g07010 Fragaria vesca HOM05D007054 ORTHO05D008888 1.1e-61 240.7 214 59.3
HanXRQChr12g0374541 Helianthus annuus HOM05D007054 ORTHO05D008888 1.1e-61 240.7 221 57.0
CsaV3_7G008860 Cucumis sativus L. HOM05D007054 ORTHO05D008888 1.4e-61 240.4 174 63.8
Lj9C361T14 Lonicera japonica HOM05D007054 ORTHO05D008888 1.9e-61 240.0 169 66.3
AUR62003054 Chenopodium quinoa HOM05D007054 ORTHO05D008888 2.5e-61 239.6 239 50.2
EL10Ac6g14668 Beta vulgaris HOM05D007054 ORTHO05D008888 5.5e-61 238.4 208 53.8
MBI16_g08580_MAGBIO Magnolia biondii HOM05D007054 ORTHO05D008888 9.3e-61 237.7 186 59.1
TAR381G0282 Trochodendron aralioides HOM05D007054 ORTHO05D008888 1.6e-60 236.9 224 54.9
Lsat_1_v5_gn_5_117740 Lactuca sativa HOM05D007054 ORTHO05D008888 2.1e-60 236.5 168 62.5
Sc26g0004390 Simmondsia chinensis HOM05D007054 ORTHO05D008888 3.5e-60 235.7 182 59.9
Carub.0001s3870 Capsella rubella HOM05D007054 ORTHO05D008888 1.0e-59 234.2 194 54.6
Ah.01g002690 Amaranthus hybridus HOM05D007054 ORTHO05D008888 1.3e-59 233.8 192 56.8
Aa31LG8G5880 Aethionema arabicum HOM05D007054 ORTHO05D008888 1.8e-59 233.4 223 49.3
Sp1g36370 Schrenkiella parvula HOM05D007054 ORTHO05D008888 3.0e-59 232.6 215 49.8
AT1G49510 Arabidopsis thaliana HOM05D007054 ORTHO05D008888 6.7e-59 231.5 198 53.5
AL1G56860 Arabidopsis lyrata HOM05D007054 ORTHO05D008888 3.3e-58 229.2 215 51.6
A05p20580 Brassica napus HOM05D007054 ORTHO05D008888 4.3e-58 228.8 176 56.2
BraA05t20968Z Brassica rapa HOM05D007054 ORTHO05D008888 4.3e-58 228.8 176 56.2
AUR62007867 Chenopodium quinoa HOM05D007054 ORTHO05D008888 9.6e-58 227.6 239 47.3
PSO541G2621 Papaver somniferum HOM05D007054 ORTHO05D008888 4.8e-57 225.3 177 59.3
PSO675G3773 Papaver somniferum HOM05D007054 ORTHO05D008888 6.3e-57 224.9 177 59.3
CARHR039530 Cardamine hirsuta HOM05D007054 ORTHO05D008888 8.2e-57 224.6 219 50.7
Aqoxy2G00166 Aquilegia oxysepala HOM05D007054 ORTHO05D008888 1.1e-56 224.2 179 55.9
BcaC05g27487 Brassica carinata HOM05D007054 ORTHO05D008888 1.8e-56 223.4 176 55.7
C05p34530 Brassica napus HOM05D007054 ORTHO05D008888 1.8e-56 223.4 176 55.7
BcaB02g11085 Brassica carinata HOM05D007054 ORTHO05D008888 2.4e-56 223.0 176 55.7
Cc02_g18390 Coffea canephora HOM05D007054 ORTHO05D008888 6.9e-56 221.5 156 64.1
BolC5t32180H Brassica oleracea HOM05D007054 ORTHO05D008888 1.2e-55 220.7 176 55.1
Thhalv10011746m.g Eutrema salsugineum HOM05D007054 ORTHO05D008888 5.9e-55 218.4 215 47.9
VMungo1215G1743 Vigna mungo HOM05D007054 ORTHO05D008888 6.5e-54 214.9 179 67.0
FAN27G0716 Fragaria x ananassa HOM05D007054 ORTHO05D008888 1.4e-53 213.8 160 65.6
CDE02G0602 Ceratophyllum demersum HOM05D007054 ORTHO05D008888 2.1e-52 209.9 177 56.5
Nitab4.5_0000604g0160 Nicotiana tabacum HOM05D007054 ORTHO05D008888 3.6e-52 209.1 213 54.0
ATR0767G176 Amborella trichopoda HOM05D007054 ORTHO05D008888 2.5e-50 203.0 227 44.9
HPP92_001831 Vanilla planifolia HOM05D007054 ORTHO05D008888 7.2e-45 184.9 168 50.0
FAN24G1908 Fragaria x ananassa HOM05D007054 ORTHO05D008888 5.1e-43 178.7 182 54.4
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 6.9e-40 168.3 183 44.8
Eucgr.I01181 Eucalyptus grandis HOM05D007054 ORTHO05D008888 3.8e-38 162.5 139 60.4
Cpa.g.sc62.54 Carica papaya HOM05D007054 ORTHO05D008888 1.9e-37 160.2 155 56.1
Sed0021769 Sechium edule HOM05D007054 ORTHO05D008888 1.7e-33 147.1 132 56.8
DCAR_022067 Daucus carota HOM05D007054 ORTHO05D008888 2.2e-33 146.7 165 49.1
arahy.Tifrunner.gnm1.ann1.2HX679 Arachis hypogaea HOM05D007054 ORTHO05D008888 4.2e-29 132.5 85 77.6
arahy.Tifrunner.gnm1.ann1.I8PDZB Arachis hypogaea HOM05D007054 ORTHO05D008888 6.1e-28 128.6 85 77.6
unitig_8.g3574 Utricularia gibba HOM05D007054 ORTHO05D008888 1.8e-27 127.1 122 50.0
Pp3c23_6910 Physcomitrium patens HOM05D007054 ORTHO05D008888 1.5e-26 124.0 242 31.4
AagrBONN_evm.TU.Sc2ySwM_344.1640 Anthoceros agrestis HOM05D007054 ORTHO05D008888 2.2e-25 120.2 138 39.1
Aa31sc103G20 Aethionema arabicum HOM05D007054 ORTHO05D008888 3.8e-22 109.4 70 61.4
FvH4_2g06990 Fragaria vesca HOM05D007054 ORTHO05D008888 2.7e-20 103.2 68 67.6
Aa31LG1G22300 Aethionema arabicum HOM05D007054 ORTHO05D008888 3.6e-20 102.8 70 58.6
SEGI_26902 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 6.1e-20 102.1 171 32.2
arahy.Tifrunner.gnm1.ann1.RU27EM Arachis hypogaea HOM05D007054 ORTHO05D008888 3.0e-19 99.8 114 53.5
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 4.0e-19 99.4 139 32.4
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 2.6e-18 96.7 165 32.1
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 7.5e-18 95.1 165 32.7
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 9.8e-18 94.7 174 31.6
Nitab4.5_0002263g0050 Nicotiana tabacum HOM05D007054 ORTHO05D008888 1.7e-17 94.0 54 70.4
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 4.8e-17 92.4 173 31.2
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 5.9e-15 85.5 207 27.1
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 1.3e-14 84.3 152 28.3
CANSAT25G1642 Cannabis sativa HOM05D007054 ORTHO05D008888 2.3e-14 83.6 116 44.0
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 2.9e-14 83.2 216 24.5
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 8.6e-14 81.6 200 29.5
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 8.6e-14 81.6 152 27.6
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 8.6e-14 81.6 141 29.8
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 1.5e-13 80.9 229 26.6
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 1.9e-13 80.5 136 33.1
Nn5g29374 Nelumbo nucifera HOM05D007054 ORTHO05D008888 1.2e-12 77.8 71 47.9
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 2.8e-12 76.6 229 24.5
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 6.1e-12 75.5 149 29.5
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 8.0e-12 75.1 171 26.9
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 1.0e-11 74.7 171 26.9
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 1.4e-11 74.3 143 28.7
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 3.0e-11 73.2 143 28.7
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 6.8e-11 72.0 164 27.4
TPR.G13063 Trifolium pratense HOM05D008077 ORTHO05D010221 6.8e-11 72.0 141 26.2
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 8.8e-11 71.6 204 27.9
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 8.8e-11 71.6 115 29.6
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 1.2e-10 71.2 135 27.4
Hma1.2p1_4204F.1_g338450 Hydrangea macrophylla HOM05D008077 ORTHO05D010221 3.4e-10 69.7 205 24.9
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 9.8e-10 68.2 146 26.7
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 9.8e-10 68.2 153 26.8
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 9.8e-10 68.2 158 24.7
MSTRG.22201 Avicennia marina HOM05D008077 ORTHO05D010221 1.7e-09 67.4 180 26.1
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 2.2e-09 67.0 209 24.4
CARHR039540 Cardamine hirsuta HOM05D007054 ORTHO05D008888 4.9e-09 65.9 44 63.6
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 4.9e-09 65.9 157 24.8
Pp3c24_11510 Physcomitrium patens HOM05D007054 ORTHO05D008888 1.1e-08 64.7 117 27.4
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 2.4e-08 63.5 204 25.0
RcHm_v2.0_Chr6g0310221 Rosa chinensis HOM05D008077 ORTHO05D010221 7.0e-08 62.0 208 24.5
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 9.2e-08 61.6 143 26.6
THA.LOC104806984 Tarenaya hassleriana HOM05D008077 ORTHO05D010221 1.6e-07 60.8 134 27.6
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 7.8e-07 58.5 164 25.6
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 2.9e-06 56.6 141 24.8
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 3.8e-06 56.2 162 24.7
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 5.0e-06 55.8 135 25.2
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 6.6e-06 55.5 211 23.2


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