Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 6.7e-215 750.4 368 100.0
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 1.8e-212 742.3 368 98.9
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 1.1e-169 600.1 358 81.8
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 1.1e-169 600.1 361 81.4
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 9.5e-169 597.0 360 80.8
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 1.1e-167 593.6 359 81.1
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 1.4e-167 593.2 360 80.6
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.3e-165 586.6 359 79.9
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 1.7e-165 586.3 364 78.8
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.9e-164 582.8 359 79.1
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 1.3e-146 523.5 360 70.8
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 2.3e-146 522.7 363 70.5
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 8.7e-146 520.8 364 70.1
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 3.3e-145 518.8 363 70.0
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 1.3e-144 516.9 363 68.3
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 4.8e-144 515.0 364 68.4
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 3.1e-143 512.3 359 68.8
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 5.3e-143 511.5 405 64.0
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 9.0e-143 510.8 362 69.3
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.5e-142 510.0 362 69.1
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 2.0e-142 509.6 359 69.9
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 3.4e-142 508.8 363 67.5
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 9.9e-142 507.3 362 69.1
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 2.9e-141 505.8 364 67.6
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 4.9e-141 505.0 363 67.8
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 6.4e-141 504.6 362 68.5
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.9e-140 503.1 362 67.7
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 3.2e-140 502.3 364 67.9
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.2e-139 500.4 362 67.4
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 6.0e-139 498.0 362 68.2
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 5.1e-138 495.0 362 67.7
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 2.5e-137 492.7 359 68.0
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 5.6e-137 491.5 359 68.8
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 6.2e-136 488.0 361 66.5
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 4.0e-135 485.3 356 67.7
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 5.3e-135 485.0 360 65.3
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.5e-134 483.4 361 65.4
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.5e-134 483.4 361 65.4
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.5e-134 483.4 356 66.9
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 1.5e-134 483.4 362 67.1
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 2.6e-134 482.6 359 66.3
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 9.9e-134 480.7 308 77.9
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 3.8e-133 478.8 361 66.5
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 6.4e-133 478.0 370 63.5
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 6.4e-133 478.0 365 63.6
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 8.4e-133 477.6 355 65.4
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 8.4e-133 477.6 363 65.0
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 4.2e-132 475.3 361 65.9
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 7.1e-132 474.6 361 65.9
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 9.3e-132 474.2 361 64.3
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 2.1e-131 473.0 363 63.6
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 3.5e-131 472.2 361 65.4
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 3.5e-131 472.2 359 63.2
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 5.1e-130 468.4 362 63.8
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 6.7e-130 468.0 380 61.8
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 1.1e-129 467.2 394 60.4
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.1e-129 467.2 338 67.5
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 2.5e-129 466.1 361 64.0
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 3.3e-129 465.7 355 63.9
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 9.6e-129 464.2 361 63.7
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 2.8e-128 462.6 365 61.6
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 1.1e-127 460.7 361 62.9
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 4.0e-127 458.8 361 62.3
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 4.0e-127 458.8 364 62.4
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 9.0e-127 457.6 360 62.2
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 1.2e-126 457.2 355 62.8
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 1.5e-126 456.8 366 62.6
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 3.4e-126 455.7 361 62.3
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 4.5e-126 455.3 339 66.1
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 7.6e-126 454.5 357 61.6
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 2.2e-125 453.0 356 62.6
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 4.9e-125 451.8 360 62.8
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 8.4e-125 451.1 362 62.2
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 8.4e-125 451.1 362 62.2
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 4.2e-124 448.7 271 82.7
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 5.5e-124 448.4 356 61.8
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 4.6e-123 445.3 363 60.9
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 1.0e-122 444.1 362 59.7
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 1.0e-122 444.1 357 60.5
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 1.5e-121 440.3 355 59.2
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 9.7e-121 437.6 356 62.1
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.6e-120 436.8 356 61.5
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 6.3e-120 434.9 356 61.8
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 1.4e-114 417.2 361 59.8
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 1.3e-112 410.6 365 59.2
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 5.3e-111 405.2 363 55.9
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 2.0e-110 403.3 285 69.8
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 2.0e-110 403.3 311 65.0
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 4.5e-110 402.1 361 56.0
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 1.3e-109 400.6 340 61.2
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 1.3e-109 400.6 355 56.6
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 5.0e-109 398.7 288 68.8
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 5.5e-108 395.2 355 56.6
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 1.1e-105 387.5 287 67.6
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 1.5e-105 387.1 361 56.5
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 7.4e-105 384.8 359 52.4
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 2.8e-104 382.9 383 52.2
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 3.7e-104 382.5 265 70.6
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 2.4e-103 379.8 236 82.2
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 3.1e-103 379.4 363 53.4
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 9.1e-103 377.9 367 54.8
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 1.5e-102 377.1 361 56.5
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 1.1e-92 344.4 335 56.1
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 9.4e-92 341.3 250 68.8
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.2e-91 340.9 359 52.6
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 5.9e-86 322.0 282 57.4
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 3.8e-85 319.3 228 67.5
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 1.7e-80 303.9 324 50.9
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 6.3e-80 302.0 365 45.8
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 2.4e-79 300.1 227 63.9
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 9.1e-79 298.1 356 42.7
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 8.6e-77 291.6 342 44.2
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 5.7e-73 278.9 344 42.7
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 1.7e-64 250.8 193 61.7
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 8.3e-64 248.4 381 36.5
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 1.9e-52 210.7 166 63.3
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 2.5e-52 210.3 174 59.8
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 3.6e-35 153.3 121 63.6
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 1.3e-32 144.8 91 71.4
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 6.0e-30 136.0 197 43.1
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 3.0e-29 133.7 103 70.9
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 2.5e-28 130.6 107 59.8
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 2.2e-16 90.9 77 58.4
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 2.3e-13 80.9 48 72.9
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 3.7e-11 73.6 147 34.0


User provided reference genes

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