Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.ETG9TD Arachis hypogaea HOM05D001310 ORTHO05D082682 1.9e-68 262.3 129 100.0
arahy.Tifrunner.gnm1.ann1.DEN2HU Arachis hypogaea HOM05D001310 ORTHO05D001283 1.5e-23 113.2 61 93.4
arahy.Tifrunner.gnm1.ann1.WS4LBJ Arachis hypogaea HOM05D001310 ORTHO05D001283 1.5e-23 113.2 61 93.4
Glyma.05G116700 Glycine max HOM05D001310 ORTHO05D001283 7.3e-15 84.3 77 55.8
Lj4g0014215 Lotus japonicus HOM05D001310 ORTHO05D001283 1.6e-14 83.2 61 68.9
Psat7g099080 Pisum sativum HOM05D001310 ORTHO05D001283 2.8e-14 82.4 61 67.2
arahy.Tifrunner.gnm1.ann1.5JS7Y0 Arachis hypogaea HOM05D001310 ORTHO05D001283 4.7e-14 81.6 61 67.2
arahy.Tifrunner.gnm1.ann1.60IM8Z Arachis hypogaea HOM05D001310 ORTHO05D001283 6.2e-14 81.3 61 65.6
Lj6g0024241 Lotus japonicus HOM05D001310 ORTHO05D001283 8.0e-14 80.9 65 63.1
Glyma.15G053800 Glycine max HOM05D001310 ORTHO05D001283 1.1e-13 80.5 64 62.5
Lalb_Chr05g0217541 Lupinus albus HOM05D001310 ORTHO05D001283 1.8e-13 79.7 61 67.2
TPR.G34521 Trifolium pratense HOM05D001310 ORTHO05D001283 3.1e-13 79.0 61 67.2
Ca_18358_v3 Cicer arietinum L. HOM05D001310 ORTHO05D001283 4.0e-13 78.6 61 65.6
Duzib052G0493 Durio zibethinus HOM05D001310 ORTHO05D001283 4.0e-13 78.6 64 59.4
Phvul.002G209800 Phaseolus vulgaris HOM05D001310 ORTHO05D001283 4.0e-13 78.6 75 53.3
CiPaw.05G034800 Carya illinoinensis HOM05D001310 ORTHO05D001283 6.8e-13 77.8 84 52.4
ClCG09G015490 Citrullus lanatus HOM05D001310 ORTHO05D001283 6.8e-13 77.8 60 63.3
Glyma.08G178700 Glycine max HOM05D001310 ORTHO05D001283 6.8e-13 77.8 65 61.5
Atru.chr6.1140 Acer truncatum HOM05D001310 ORTHO05D001283 1.2e-12 77.0 61 62.3
Lalb_Chr15g0090431 Lupinus albus HOM05D001310 ORTHO05D001283 1.2e-12 77.0 61 67.2
Medtr4g094205 Medicago truncatula HOM05D001310 ORTHO05D001283 1.5e-12 76.6 70 58.6
Thecc.02G138200 Theobroma cacao HOM05D001310 ORTHO05D001283 2.6e-12 75.9 61 60.7
MELO3C018637.2 Cucumis melo HOM05D001310 ORTHO05D001283 4.4e-12 75.1 61 62.3
Gohir.D12G015600 Gossypium hirsutum HOM05D001310 ORTHO05D001283 4.4e-12 75.1 83 53.0
Gorai.008G015700 Gossypium raimondii HOM05D001310 ORTHO05D001283 4.4e-12 75.1 83 53.0
Duzib132G0694 Durio zibethinus HOM05D001310 ORTHO05D001283 5.8e-12 74.7 61 59.0
Gohir.A12G015200 Gossypium hirsutum HOM05D001310 ORTHO05D001283 5.8e-12 74.7 61 62.3
Cfa005584 Carpinus fangiana HOM05D001310 ORTHO05D001283 7.5e-12 74.3 83 51.8
Gohir.D02G197800 Gossypium hirsutum HOM05D001310 ORTHO05D001283 7.5e-12 74.3 61 60.7
Gorai.005G221100 Gossypium raimondii HOM05D001310 ORTHO05D001283 7.5e-12 74.3 61 60.7
Sc18g0006830 Simmondsia chinensis HOM05D001310 ORTHO05D001283 7.5e-12 74.3 61 57.4
CsaV3_7G006560 Cucumis sativus L. HOM05D001310 ORTHO05D001283 1.3e-11 73.6 61 60.7
Phvul.006G206200 Phaseolus vulgaris HOM05D001310 ORTHO05D001283 1.3e-11 73.6 61 62.3
GSVIVG01038788001 Vitis vinifera HOM05D001310 ORTHO05D001283 1.3e-11 73.6 84 47.6
Manes.07G031700 Manihot esculenta HOM05D001310 ORTHO05D001283 2.2e-11 72.8 61 62.3
Sed0028182 Sechium edule HOM05D001310 ORTHO05D001283 2.2e-11 72.8 63 60.3
VMungo0540G1955 Vigna mungo HOM05D001310 ORTHO05D001283 2.2e-11 72.8 61 62.3
Hma1.2p1_0522F.1_g171690 Hydrangea macrophylla HOM05D001310 ORTHO05D001283 2.9e-11 72.4 61 54.1
Prupe.8G059900 Prunus persica HOM05D001310 ORTHO05D001283 3.7e-11 72.0 79 54.4
Haze_10723 Corylus avellana HOM05D001310 ORTHO05D001283 4.9e-11 71.6 60 58.3
MD10G1051400 Malus domestica HOM05D001310 ORTHO05D001283 4.9e-11 71.6 60 63.3
TAR628G1222 Trochodendron aralioides HOM05D001310 ORTHO05D001283 8.3e-11 70.9 61 55.7
VMungo0251G3511 Vigna mungo HOM05D001310 ORTHO05D001283 8.3e-11 70.9 75 49.3
Dinv24185 Davidia involucrata HOM05D001310 ORTHO05D001283 1.1e-10 70.5 61 55.7
Eucgr.I02661 Eucalyptus grandis HOM05D001310 ORTHO05D001283 1.1e-10 70.5 61 54.1
TWI59G1224 Tripterygium wilfordii HOM05D001310 ORTHO05D001283 1.1e-10 70.5 83 48.2
COL.COLO4_08574 Corchorus olitorius HOM05D001310 ORTHO05D001283 1.4e-10 70.1 61 60.7
Gohir.A03G174600 Gossypium hirsutum HOM05D001310 ORTHO05D001283 1.4e-10 70.1 61 57.4
Potri.001G205300 Populus trichocarpa HOM05D001310 ORTHO05D001283 1.4e-10 70.1 87 48.3
Dinv09029 Davidia involucrata HOM05D001310 ORTHO05D001283 2.4e-10 69.3 61 57.4
QL11p021330 Quercus lobata HOM05D001310 ORTHO05D001283 2.4e-10 69.3 63 55.6
Sabra01G0158200 Salix brachista HOM05D001310 ORTHO05D001283 4.1e-10 68.6 62 53.2
CSS0021078 Camellia sinensis var. sinensis HOM05D001310 ORTHO05D001283 5.4e-10 68.2 61 54.1
CSS0040216 Camellia sinensis var. sinensis HOM05D001310 ORTHO05D001283 5.4e-10 68.2 61 54.1
Ciclev10028606m.g Citrus clementina HOM05D001310 ORTHO05D001283 5.4e-10 68.2 61 55.7
Lj5A239G80 Lonicera japonica HOM05D001310 ORTHO05D001283 5.4e-10 68.2 61 54.1
Os02g0754500 Oryza sativa ssp. japonica HOM05D001310 ORTHO05D001283 5.4e-10 68.2 61 60.7
Peaxi162Scf00003g03547 Petunia axillaris HOM05D001310 ORTHO05D001283 5.4e-10 68.2 78 51.3
Nitab4.5_0000294g0010 Nicotiana tabacum HOM05D001310 ORTHO05D001283 7.0e-10 67.8 78 50.0
Nitab4.5_0002067g0060 Nicotiana tabacum HOM05D001310 ORTHO05D001283 9.2e-10 67.4 78 51.3
Lsat_1_v5_gn_9_117041 Lactuca sativa HOM05D001310 ORTHO05D001283 1.2e-09 67.0 75 50.7
vmacro19937 Vaccinium macrocarpon HOM05D001310 ORTHO05D001283 1.6e-09 66.6 61 52.5
A10p27860 Brassica napus HOM05D001310 ORTHO05D001283 2.0e-09 66.2 63 54.0
BraA10t44835Z Brassica rapa HOM05D001310 ORTHO05D001283 2.0e-09 66.2 63 54.0
Nn5g30089 Nelumbo nucifera HOM05D001310 ORTHO05D001283 2.0e-09 66.2 61 50.8
Rhsim05G0106400 Rhododendron simsii HOM05D001310 ORTHO05D001283 2.0e-09 66.2 61 52.5
BcaB08g37207 Brassica carinata HOM05D001310 ORTHO05D001283 2.7e-09 65.9 63 54.0
C09p67960 Brassica napus HOM05D001310 ORTHO05D001283 2.7e-09 65.9 63 54.0
BolC9t59555H Brassica oleracea HOM05D001310 ORTHO05D001283 2.7e-09 65.9 63 54.0
HanXRQChr03g0067581 Helianthus annuus HOM05D001310 ORTHO05D001283 2.7e-09 65.9 61 55.7
PGR142G1649 Punica granatum HOM05D001310 ORTHO05D001283 2.7e-09 65.9 84 45.2
Sp6g33910 Schrenkiella parvula HOM05D001310 ORTHO05D001283 2.7e-09 65.9 61 54.1
Cc02_g21470 Coffea canephora HOM05D001310 ORTHO05D001283 3.5e-09 65.5 61 52.5
MD05G1044300 Malus domestica HOM05D001310 ORTHO05D001283 3.5e-09 65.5 61 57.4
Solyc10g047300.2 Solanum lycopersicum HOM05D001310 ORTHO05D001283 3.5e-09 65.5 83 49.4
THA.LOC104799946 Tarenaya hassleriana HOM05D001310 ORTHO05D001283 3.5e-09 65.5 61 55.7
Thhalv10013019m.g Eutrema salsugineum HOM05D001310 ORTHO05D001283 4.6e-09 65.1 61 54.1
PGSC0003DMG400016669 Solanum tuberosum HOM05D001310 ORTHO05D001283 4.6e-09 65.1 78 48.7
Sopen10g017560 Solanum pennellii HOM05D001310 ORTHO05D001283 6.0e-09 64.7 63 55.6
CDE10G0845 Ceratophyllum demersum HOM05D001310 ORTHO05D001283 7.8e-09 64.3 61 52.5
MBI05_g39043_MAGBIO Magnolia biondii HOM05D001310 ORTHO05D001283 7.8e-09 64.3 61 50.8
AT5G09420 Arabidopsis thaliana HOM05D001310 ORTHO05D001283 1.0e-08 63.9 63 50.8
HanXRQChr13g0420761 Helianthus annuus HOM05D001310 ORTHO05D001283 1.0e-08 63.9 61 55.7
Actinidia28053 Actinidia chinensis HOM05D001310 ORTHO05D001283 1.3e-08 63.5 61 50.8
Aqoxy6G00773 Aquilegia oxysepala HOM05D001310 ORTHO05D001283 1.3e-08 63.5 61 49.2
CARHR203980 Cardamine hirsuta HOM05D001310 ORTHO05D001283 1.7e-08 63.2 61 52.5
MBI19_g17595_MAGBIO Magnolia biondii HOM05D001310 ORTHO05D001283 1.7e-08 63.2 63 49.2
Aa31LG3G17590 Aethionema arabicum HOM05D001310 ORTHO05D001283 2.3e-08 62.8 61 50.8
CAN.G1.39 Capsicum annuum HOM05D001310 ORTHO05D001283 2.3e-08 62.8 79 49.4
Oeu019231.2 Olea europaea HOM05D001310 ORTHO05D001283 2.3e-08 62.8 61 52.5
AL6G19810 Arabidopsis lyrata HOM05D001310 ORTHO05D001283 3.9e-08 62.0 61 50.8
Migut.N01072 Erythranthe guttata HOM05D001310 ORTHO05D001283 3.9e-08 62.0 63 55.6
Zm00001eb255310 Zea mays HOM05D001310 ORTHO05D001283 3.9e-08 62.0 61 54.1
BcaB08g37206 Brassica carinata HOM05D001310 ORTHO05D001283 6.6e-08 61.2 61 50.8
Manes.09G165600 Manihot esculenta HOM05D001310 ORTHO05D001283 6.6e-08 61.2 61 49.2
PSO781G0108 Papaver somniferum HOM05D001310 ORTHO05D001283 6.6e-08 61.2 61 47.5
unitig_8.g3412 Utricularia gibba HOM05D001310 ORTHO05D001283 6.6e-08 61.2 61 54.1
SGA_v2.0_scaffold45G17317 Striga asiatica HOM05D001310 ORTHO05D001283 1.5e-07 60.1 79 45.6
Carub.0006s0797 Capsella rubella HOM05D001310 ORTHO05D001283 1.9e-07 59.7 60 50.0
ECA240G0103 Erigeron canadensis HOM05D001310 ORTHO05D001283 1.9e-07 59.7 61 50.8
PSO541G2392 Papaver somniferum HOM05D001310 ORTHO05D001283 1.9e-07 59.7 61 45.9
Migut.B00605 Erythranthe guttata HOM05D001310 ORTHO05D001283 2.5e-07 59.3 61 54.1
MBI19_g17587_MAGBIO Magnolia biondii HOM05D001310 ORTHO05D001283 3.3e-07 58.9 62 48.4
SEGI_22675 Sequoiadendron giganteum HOM05D001310 ORTHO05D001283 3.3e-07 58.9 61 50.8
ATR0626G200 Amborella trichopoda HOM05D001310 ORTHO05D001283 7.3e-07 57.8 65 38.5
COL.COLO4_13495 Corchorus olitorius HOM05D001310 ORTHO05D001283 7.3e-07 57.8 63 46.0
Gohir.D11G274100 Gossypium hirsutum HOM05D001310 ORTHO05D001283 7.3e-07 57.8 63 44.4
Thecc.05G305100 Theobroma cacao HOM05D001310 ORTHO05D001283 7.3e-07 57.8 65 46.2
Ca_10104_v3 Cicer arietinum L. HOM05D001310 ORTHO05D001283 9.5e-07 57.4 61 54.1
Os03g0707900 Oryza sativa ssp. japonica HOM05D001310 ORTHO05D001283 9.5e-07 57.4 65 43.1
Potri.013G024100 Populus trichocarpa HOM05D001310 ORTHO05D001283 9.5e-07 57.4 61 44.3
Medtr1g082750 Medicago truncatula HOM05D001310 ORTHO05D001283 1.2e-06 57.0 61 52.5
SalBow5G0105 Salvia bowleyana HOM05D001310 ORTHO05D001283 1.6e-06 56.6 72 44.4
CDE10G0428 Ceratophyllum demersum HOM05D005870 ORTHO05D007216 2.1e-06 56.2 74 44.6
Gohir.A11G264000 Gossypium hirsutum HOM05D001310 ORTHO05D001283 2.1e-06 56.2 63 44.4
PSO478G3507 Papaver somniferum HOM05D001310 ORTHO05D001283 2.1e-06 56.2 65 46.2
Gohir.D11G274200 Gossypium hirsutum HOM05D001310 ORTHO05D001283 2.8e-06 55.8 61 45.9
Gorai.007G295900 Gossypium raimondii HOM05D001310 ORTHO05D001283 2.8e-06 55.8 61 45.9
Duzib106G0949 Durio zibethinus HOM05D001310 ORTHO05D001283 3.6e-06 55.5 65 41.5
Duzib177G0013 Durio zibethinus HOM05D001310 ORTHO05D001283 3.6e-06 55.5 61 47.5
Duzib177G0593 Durio zibethinus HOM05D001310 ORTHO05D001283 3.6e-06 55.5 61 47.5
Psat6g149520 Pisum sativum HOM05D001310 ORTHO05D001283 3.6e-06 55.5 61 47.5
COL.COLO4_13489 Corchorus olitorius HOM05D001310 ORTHO05D001283 4.7e-06 55.1 65 43.1
Duzib177G0831 Durio zibethinus HOM05D001310 ORTHO05D001283 4.7e-06 55.1 65 41.5
Duzib177G1171 Durio zibethinus HOM05D001310 ORTHO05D001283 4.7e-06 55.1 65 41.5
Gorai.007G295700 Gossypium raimondii HOM05D001310 ORTHO05D001283 4.7e-06 55.1 63 42.9
PGR083G2513 Punica granatum HOM05D001310 ORTHO05D001283 4.7e-06 55.1 61 45.9
QL03p005878 Quercus lobata HOM05D001310 ORTHO05D001283 4.7e-06 55.1 63 44.4
QL03p006480 Quercus lobata HOM05D001310 ORTHO05D001283 4.7e-06 55.1 63 44.4
Sabra13G0025700 Salix brachista HOM05D001310 ORTHO05D001283 4.7e-06 55.1 61 44.3
SEGI_24729 Sequoiadendron giganteum HOM05D001310 ORTHO05D046685 6.2e-06 54.7 66 37.9
MBI12_g33080_MAGBIO Magnolia biondii HOM05D001310 ORTHO05D001283 8.1e-06 54.3 66 40.9
PGR083G0598 Punica granatum HOM05D001310 ORTHO05D001283 8.1e-06 54.3 61 47.5
HPP92_016785 Vanilla planifolia HOM05D001310 ORTHO05D001283 8.1e-06 54.3 89 39.3


User provided reference genes

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