Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.DI5N6C Arachis hypogaea HOM05D005602 ORTHO05D007049 1.5e-99 366.3 208 100.0
arahy.Tifrunner.gnm1.ann1.GP740U Arachis hypogaea HOM05D005602 ORTHO05D007049 5.9e-99 364.4 208 99.0
VMungo1215G3172 Vigna mungo HOM05D005602 ORTHO05D007049 6.4e-29 131.7 253 39.5
Lalb_Chr05g0214641 Lupinus albus HOM05D005602 ORTHO05D007049 2.1e-27 126.7 217 43.3
Glyma.01G212500 Glycine max HOM05D005602 ORTHO05D007049 3.5e-27 125.9 263 43.7
Medtr5g011770 Medicago truncatula HOM05D005602 ORTHO05D007049 1.3e-26 124.0 261 41.8
Lj2g0005511 Lotus japonicus HOM05D005602 ORTHO05D007049 2.3e-26 123.2 256 43.0
Phvul.002G151100 Phaseolus vulgaris HOM05D005602 ORTHO05D007049 2.5e-25 119.8 251 38.2
Glyma.11G029300 Glycine max HOM05D005602 ORTHO05D007049 5.6e-25 118.6 255 42.4
Haze_09041 Corylus avellana HOM05D005602 ORTHO05D007049 9.9e-22 107.8 266 39.5
MD04G1078000 Malus domestica HOM05D005602 ORTHO05D007049 3.9e-18 95.9 225 35.1
Cfa012027 Carpinus fangiana HOM05D005602 ORTHO05D007049 1.9e-17 93.6 265 34.7
Manes.02G032722 Manihot esculenta HOM05D005602 ORTHO05D007049 3.3e-17 92.8 259 34.7
FvH4_5g00820 Fragaria vesca HOM05D005602 ORTHO05D007049 7.3e-17 91.7 223 37.2
FAN18G1786 Fragaria x ananassa HOM05D005602 ORTHO05D007049 2.8e-16 89.7 219 36.5
FAN04G0086 Fragaria x ananassa HOM05D005602 ORTHO05D007049 6.2e-16 88.6 223 36.3
QL12p015265 Quercus lobata HOM05D005602 ORTHO05D007049 8.1e-16 88.2 257 34.2
QL93p2011_0032 Quercus lobata HOM05D005602 ORTHO05D007049 8.1e-16 88.2 257 34.2
Ciclev10021045m.g Citrus clementina HOM05D005602 ORTHO05D007049 1.1e-15 87.8 262 34.0
RcHm_v2.0_Chr7g0201261 Rosa chinensis HOM05D005602 ORTHO05D007049 1.4e-15 87.4 219 34.7
Duzib068G0634 Durio zibethinus HOM05D005602 ORTHO05D007049 2.4e-15 86.7 267 34.5
CiPaw.12G104000 Carya illinoinensis HOM05D005602 ORTHO05D007049 6.9e-15 85.1 255 35.3
CANSAT21G1867 Cannabis sativa HOM05D005602 ORTHO05D007049 2.0e-14 83.6 259 32.4
CiPaw.11G146600 Carya illinoinensis HOM05D005602 ORTHO05D007049 3.4e-14 82.8 186 38.2
ClCG01G003580 Citrullus lanatus HOM05D005602 ORTHO05D007049 3.4e-14 82.8 257 30.7
Lj2A206G27 Lonicera japonica HOM05D005602 ORTHO05D007049 9.9e-14 81.3 221 32.6
FAN08G0713 Fragaria x ananassa HOM05D005602 ORTHO05D007049 2.2e-13 80.1 245 34.7
Actinidia14472 Actinidia chinensis HOM05D005602 ORTHO05D007049 3.8e-13 79.3 250 31.2
Eucgr.D01978 Eucalyptus grandis HOM05D005602 ORTHO05D007049 6.4e-13 78.6 85 49.4
CsaV3_5G003680 Cucumis sativus L. HOM05D005602 ORTHO05D007049 1.1e-12 77.8 254 29.9
Thecc.03G262800 Theobroma cacao HOM05D005602 ORTHO05D007049 1.9e-12 77.0 264 32.2
PGR042G3436 Punica granatum HOM05D005602 ORTHO05D007049 9.3e-12 74.7 267 30.0
MELO3C005587.2 Cucumis melo HOM05D005602 ORTHO05D007049 1.2e-11 74.3 207 30.9
Eucgr.E00479 Eucalyptus grandis HOM05D005602 ORTHO05D007049 2.1e-11 73.6 88 51.1
FAN13G0541 Fragaria x ananassa HOM05D005602 ORTHO05D007049 2.1e-11 73.6 83 49.4
COL.COLO4_23856 Corchorus olitorius HOM05D005602 ORTHO05D007049 3.5e-11 72.8 223 30.5
Sabra03G0080700 Salix brachista HOM05D005602 ORTHO05D007049 3.5e-11 72.8 258 29.5
Psat2g179800 Pisum sativum HOM05D005602 ORTHO05D007049 6.0e-11 72.0 95 66.3
CSS0008936 Camellia sinensis var. sinensis HOM05D005602 ORTHO05D007049 7.9e-11 71.6 88 45.5
Gohir.A12G221600 Gossypium hirsutum HOM05D005602 ORTHO05D007049 1.0e-10 71.2 262 32.1
Gorai.008G240200 Gossypium raimondii HOM05D005602 ORTHO05D007049 1.3e-10 70.9 264 30.7
Gohir.D12G224100 Gossypium hirsutum HOM05D005602 ORTHO05D007049 1.8e-10 70.5 265 30.6
Duzib084G0205 Durio zibethinus HOM05D005602 ORTHO05D007049 2.3e-10 70.1 267 32.2
DCAR_000860 Daucus carota HOM05D005602 ORTHO05D007049 3.0e-10 69.7 79 41.8
THA.LOC104813933 Tarenaya hassleriana HOM05D005602 ORTHO05D009891 6.7e-10 68.6 184 33.2
Actinidia02079 Actinidia chinensis HOM05D005602 ORTHO05D007049 8.7e-10 68.2 138 38.4
Hma1.2p1_0138F.1_g063075 Hydrangea macrophylla HOM05D005602 ORTHO05D007049 1.1e-09 67.8 83 48.2
Hma1.2p1_0138F.1_g063080 Hydrangea macrophylla HOM05D005602 ORTHO05D007049 1.1e-09 67.8 83 48.2
Peaxi162Scf00102g01238 Petunia axillaris HOM05D005602 ORTHO05D007049 1.5e-09 67.4 211 31.3
Sopen08g027940 Solanum pennellii HOM05D005602 ORTHO05D007049 1.5e-09 67.4 218 30.7
Aa31LG6G4830 Aethionema arabicum HOM05D005602 ORTHO05D007049 2.5e-09 66.6 221 32.6
CSS0020464 Camellia sinensis var. sinensis HOM05D005602 ORTHO05D007049 2.5e-09 66.6 231 31.2
Peaxi162Scf00271g00219 Petunia axillaris HOM05D005602 ORTHO05D007049 3.3e-09 66.2 208 30.3
PGSC0003DMG400003955 Solanum tuberosum HOM05D005602 ORTHO05D007049 4.3e-09 65.9 215 29.8
AL6G46940 Arabidopsis lyrata HOM05D005602 ORTHO05D007049 5.6e-09 65.5 82 42.7
Gorai.004G203300 Gossypium raimondii HOM05D005602 ORTHO05D007049 5.6e-09 65.5 203 30.5
Potri.001G116200 Populus trichocarpa HOM05D005602 ORTHO05D007049 9.6e-09 64.7 215 29.8
Sc22g0000560 Simmondsia chinensis HOM05D005602 ORTHO05D007049 9.6e-09 64.7 249 26.1
Thhalv10028909m.g Eutrema salsugineum HOM05D005602 ORTHO05D007049 1.3e-08 64.3 82 45.1
BcaC03g16309 Brassica carinata HOM05D005602 ORTHO05D007049 1.6e-08 63.9 82 41.5
BcaC09g51083 Brassica carinata HOM05D005602 ORTHO05D007049 1.6e-08 63.9 82 45.1
BcaNung01034 Brassica carinata HOM05D005602 ORTHO05D007049 1.6e-08 63.9 82 43.9
A02p25870 Brassica napus HOM05D005602 ORTHO05D007049 1.6e-08 63.9 82 41.5
BolC2t10138H Brassica oleracea HOM05D005602 ORTHO05D007049 1.6e-08 63.9 82 41.5
BraA01t01350Z Brassica rapa HOM05D005602 ORTHO05D007049 1.6e-08 63.9 82 45.1
BraA02t07575Z Brassica rapa HOM05D005602 ORTHO05D007049 1.6e-08 63.9 82 41.5
Carub.0006s3122 Capsella rubella HOM05D005602 ORTHO05D007049 1.6e-08 63.9 82 41.5
Sp6g05400 Schrenkiella parvula HOM05D005602 ORTHO05D007049 1.6e-08 63.9 82 41.5
Solyc08g079590.3 Solanum lycopersicum HOM05D005602 ORTHO05D007049 1.6e-08 63.9 219 29.2
Oeu025553.1 Olea europaea HOM05D005602 ORTHO05D007049 3.7e-08 62.8 211 28.9
BcaB05g23765 Brassica carinata HOM05D005602 ORTHO05D007049 4.8e-08 62.4 82 40.2
BolC1t01656H Brassica oleracea HOM05D005602 ORTHO05D007049 6.2e-08 62.0 83 44.6
BcaC01g00797 Brassica carinata HOM05D005602 ORTHO05D007049 8.1e-08 61.6 82 42.7
A08p15970 Brassica napus HOM05D005602 ORTHO05D007049 8.1e-08 61.6 82 42.7
BolC3t20728H Brassica oleracea HOM05D005602 ORTHO05D007049 8.1e-08 61.6 82 42.7
BraA08t33569Z Brassica rapa HOM05D005602 ORTHO05D007049 8.1e-08 61.6 82 42.7
MBI04_g35274_MAGBIO Magnolia biondii HOM05D005602 ORTHO05D007049 8.1e-08 61.6 252 27.0
Thhalv10026059m.g Eutrema salsugineum HOM05D005602 ORTHO05D007049 1.1e-07 61.2 82 41.5
Aa31LG9G10380 Aethionema arabicum HOM05D005602 ORTHO05D007049 1.4e-07 60.8 86 38.4
C03p84390 Brassica napus HOM05D005602 ORTHO05D007049 1.4e-07 60.8 82 41.5
Atru.chr9.1453 Acer truncatum HOM05D005602 ORTHO05D007049 3.1e-07 59.7 222 27.5
Cc08_g13360 Coffea canephora HOM05D005602 ORTHO05D007049 4.0e-07 59.3 216 29.6
Nn4g26397 Nelumbo nucifera HOM05D005602 ORTHO05D007049 4.0e-07 59.3 253 23.3
TWI81G0110 Tripterygium wilfordii HOM05D005602 ORTHO05D007049 6.9e-07 58.5 257 28.4
Migut.E00970 Erythranthe guttata HOM05D005602 ORTHO05D007049 9.0e-07 58.2 74 40.5
Gohir.A08G174400 Gossypium hirsutum HOM05D005602 ORTHO05D007049 9.0e-07 58.2 249 26.1
Sp7g20810 Schrenkiella parvula HOM05D005602 ORTHO05D007049 2.6e-06 56.6 82 39.0
A01p14030 Brassica napus HOM05D005602 ORTHO05D009891 3.4e-06 56.2 77 42.9
C01p17190 Brassica napus HOM05D005602 ORTHO05D007049 3.4e-06 56.2 77 42.9
CARHR229710 Cardamine hirsuta HOM05D005602 ORTHO05D007049 4.5e-06 55.8 82 39.0
Nitab4.5_0001816g0270 Nicotiana tabacum HOM05D005602 ORTHO05D007049 4.5e-06 55.8 86 37.2
AT4G22758 Arabidopsis thaliana HOM05D005602 ORTHO05D007049 7.6e-06 55.1 227 30.0


User provided reference genes

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