Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8EG8MS Arachis hypogaea HOM05D000255 ORTHO05D086979 6.1e-36 153.7 80 100.0
arahy.Tifrunner.gnm1.ann1.N5E9VC Arachis hypogaea HOM05D000255 ORTHO05D001116 1.6e-12 75.9 90 55.6
arahy.Tifrunner.gnm1.ann1.XGK89K Arachis hypogaea HOM05D000255 ORTHO05D001116 1.6e-12 75.9 90 55.6
VMungo0251G3247 Vigna mungo HOM05D000255 ORTHO05D001116 8.0e-12 73.6 90 52.2
Phvul.002G272200 Phaseolus vulgaris HOM05D000255 ORTHO05D001116 1.0e-11 73.2 90 52.2
Lalb_Chr07g0184401 Lupinus albus HOM05D000255 ORTHO05D001116 4.0e-11 71.2 90 51.1
Glyma.08G157000 Glycine max HOM05D000255 ORTHO05D001116 2.6e-10 68.6 90 50.0
PGR042G1832 Punica granatum HOM05D000255 ORTHO05D001116 2.6e-10 68.6 90 50.0
ClCG02G000460 Citrullus lanatus HOM05D000255 ORTHO05D001116 3.3e-10 68.2 91 49.5
Medtr8g093740 Medicago truncatula HOM05D000255 ORTHO05D001116 3.3e-10 68.2 90 51.1
Phvul.001G064800 Phaseolus vulgaris HOM05D000255 ORTHO05D001116 3.3e-10 68.2 87 51.7
Lalb_Chr13g0296601 Lupinus albus HOM05D000255 ORTHO05D001116 4.4e-10 67.8 90 48.9
TAR628G1602 Trochodendron aralioides HOM05D000255 ORTHO05D001116 4.4e-10 67.8 90 50.0
Actinidia03438 Actinidia chinensis HOM05D000255 ORTHO05D001116 7.5e-10 67.0 90 48.9
Eucgr.F02759 Eucalyptus grandis HOM05D000255 ORTHO05D001116 7.5e-10 67.0 90 48.9
Lj4g0015238 Lotus japonicus HOM05D000255 ORTHO05D001116 7.5e-10 67.0 90 50.0
CSS0004681 Camellia sinensis var. sinensis HOM05D000255 ORTHO05D001116 9.7e-10 66.6 90 48.9
Dinv25785 Davidia involucrata HOM05D000255 ORTHO05D001116 9.7e-10 66.6 90 48.9
Glyma.05G191800 Glycine max HOM05D000255 ORTHO05D001116 9.7e-10 66.6 90 48.9
Dinv41145 Davidia involucrata HOM05D000255 ORTHO05D001116 1.3e-09 66.2 90 47.8
TAR381G0489 Trochodendron aralioides HOM05D000255 ORTHO05D001116 1.3e-09 66.2 90 47.8
Actinidia06614 Actinidia chinensis HOM05D000255 ORTHO05D001116 2.2e-09 65.5 87 49.4
Carub.0001s3482 Capsella rubella HOM05D000255 ORTHO05D001116 2.2e-09 65.5 90 47.8
CiPaw.04G081800 Carya illinoinensis HOM05D000255 ORTHO05D001116 2.2e-09 65.5 90 47.8
Ciclev10002477m.g Citrus clementina HOM05D000255 ORTHO05D001116 2.2e-09 65.5 87 49.4
MELO3C023233.2 Cucumis melo HOM05D000255 ORTHO05D001116 2.2e-09 65.5 90 48.9
CsaV3_2G019400 Cucumis sativus L. HOM05D000255 ORTHO05D001116 2.2e-09 65.5 90 48.9
Manes.18G085300 Manihot esculenta HOM05D000255 ORTHO05D001116 2.2e-09 65.5 90 47.8
Atru.chr13.1651 Acer truncatum HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 48.9
Aa31LG6G9490 Aethionema arabicum HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
AL1G51970 Arabidopsis lyrata HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
AT1G43890 Arabidopsis thaliana HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
BcaB04g17756 Brassica carinata HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
BcaB07g33969 Brassica carinata HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
BcaC05g27656 Brassica carinata HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
A05p21680 Brassica napus HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
A08p07590 Brassica napus HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
A10p07700 Brassica napus HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
C05p36440 Brassica napus HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
BolC5t32373H Brassica oleracea HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
BolC6t35170H Brassica oleracea HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
BraA05t21090Z Brassica rapa HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
BraA08t32775Z Brassica rapa HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
BraSC36t46035Z Brassica rapa HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
CARHR035660 Cardamine hirsuta HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
Ciclev10002473m.g Citrus clementina HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 48.9
Thhalv10011775m.g Eutrema salsugineum HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
MBI03_g37384_MAGBIO Magnolia biondii HOM05D000255 ORTHO05D030960 2.8e-09 65.1 94 47.9
Manes.12G156300 Manihot esculenta HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 48.9
Nn5g28533 Nelumbo nucifera HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
Psat7g046000 Pisum sativum HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 48.9
Prupe.4G271600 Prunus persica HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
Sp1g33180 Schrenkiella parvula HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 47.8
TPR.G37417 Trifolium pratense HOM05D000255 ORTHO05D001116 2.8e-09 65.1 90 48.9
COL.COLO4_35481 Corchorus olitorius HOM05D000255 ORTHO05D001116 3.7e-09 64.7 87 48.3
COL.COLO4_35754 Corchorus olitorius HOM05D000255 ORTHO05D001116 3.7e-09 64.7 90 46.7
Glyma.14G118400 Glycine max HOM05D000255 ORTHO05D001116 3.7e-09 64.7 87 49.4
TWI79G1372 Tripterygium wilfordii HOM05D000255 ORTHO05D001116 3.7e-09 64.7 90 47.8
CANSAT01G0898 Cannabis sativa HOM05D000255 ORTHO05D001116 4.8e-09 64.3 90 47.8
Haze_25254 Corylus avellana HOM05D000255 ORTHO05D001116 4.8e-09 64.3 90 46.7
BcaC08g42824 Brassica carinata HOM05D000255 ORTHO05D001116 6.3e-09 63.9 85 48.2
C06p00440 Brassica napus HOM05D000255 ORTHO05D001116 6.3e-09 63.9 85 48.2
Ca_16951_v3 Cicer arietinum L. HOM05D000255 ORTHO05D001116 6.3e-09 63.9 90 50.0
Cc10_g13190 Coffea canephora HOM05D000255 ORTHO05D001116 6.3e-09 63.9 83 49.4
Lj1g0004258 Lotus japonicus HOM05D000255 ORTHO05D001116 6.3e-09 63.9 87 49.4
MD05G1010800 Malus domestica HOM05D000255 ORTHO05D001116 6.3e-09 63.9 87 48.3
MD10G1009500 Malus domestica HOM05D000255 ORTHO05D001116 6.3e-09 63.9 87 48.3
Potri.002G074400 Populus trichocarpa HOM05D000255 ORTHO05D001116 6.3e-09 63.9 87 48.3
TPR.G28235 Trifolium pratense HOM05D000255 ORTHO05D001116 6.3e-09 63.9 87 48.3
TAR625G1527 Trochodendron aralioides HOM05D000255 ORTHO05D001116 6.3e-09 63.9 90 47.8
CSS0039405 Camellia sinensis var. sinensis HOM05D000255 ORTHO05D001116 8.2e-09 63.5 85 49.4
Hma1.2p1_0107F.1_g051310 Hydrangea macrophylla HOM05D000255 ORTHO05D001116 8.2e-09 63.5 90 45.6
Potri.005G063500 Populus trichocarpa HOM05D000255 ORTHO05D001116 8.2e-09 63.5 90 47.8
Potri.007G105500 Populus trichocarpa HOM05D000255 ORTHO05D001116 8.2e-09 63.5 90 46.7
Atru.chr4.914 Acer truncatum HOM05D000255 ORTHO05D001116 1.1e-08 63.2 90 46.7
Cpa.g.sc42.161 Carica papaya HOM05D000255 ORTHO05D001116 1.1e-08 63.2 90 47.8
CDE02G2183 Ceratophyllum demersum HOM05D000255 ORTHO05D001116 1.1e-08 63.2 90 46.7
FAN28G1065 Fragaria x ananassa HOM05D000255 ORTHO05D001116 1.1e-08 63.2 85 48.2
Lsat_1_v5_gn_4_135940 Lactuca sativa HOM05D000255 ORTHO05D001116 1.1e-08 63.2 90 48.9
RcHm_v2.0_Chr6g0277801 Rosa chinensis HOM05D000255 ORTHO05D001116 1.1e-08 63.2 87 47.1
Sabra05G0052700 Salix brachista HOM05D000255 ORTHO05D001116 1.1e-08 63.2 90 47.8
TWI34G0732 Tripterygium wilfordii HOM05D000255 ORTHO05D001116 1.1e-08 63.2 90 47.8
unitig_52.g17542 Utricularia gibba HOM05D001175 ORTHO05D003291 1.1e-08 63.2 82 50.0
DCAR_014400 Daucus carota HOM05D000255 ORTHO05D001116 1.4e-08 62.8 84 47.6
Glyma.11G178506 Glycine max HOM05D000255 ORTHO05D001116 1.4e-08 62.8 84 48.8
Gohir.D02G074900 Gossypium hirsutum HOM05D000255 ORTHO05D001116 1.4e-08 62.8 87 48.3
VMungo0647G0895 Vigna mungo HOM05D000255 ORTHO05D001116 1.4e-08 62.8 87 48.3
CSS0023420 Camellia sinensis var. sinensis HOM05D000255 ORTHO05D001116 1.8e-08 62.4 90 45.6
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 1.8e-08 62.4 84 47.6
Duzib264G0802 Durio zibethinus HOM05D000255 ORTHO05D001116 1.8e-08 62.4 87 47.1
FvH4_1g24410 Fragaria vesca HOM05D000255 ORTHO05D001116 1.8e-08 62.4 84 48.8
FAN19G3051 Fragaria x ananassa HOM05D000255 ORTHO05D001116 1.8e-08 62.4 84 48.8
Lj4C689T8 Lonicera japonica HOM05D000255 ORTHO05D001116 1.8e-08 62.4 90 45.6
Lalb_Chr04g0263621 Lupinus albus HOM05D000255 ORTHO05D001116 1.8e-08 62.4 82 48.8
Lalb_Chr08g0238321 Lupinus albus HOM05D000255 ORTHO05D001116 1.8e-08 62.4 87 48.3
Lalb_Chr11g0068491 Lupinus albus HOM05D000255 ORTHO05D001116 1.8e-08 62.4 87 48.3
MD00G1163000 Malus domestica HOM05D000255 ORTHO05D001116 1.8e-08 62.4 82 50.0
MD01G1005500 Malus domestica HOM05D000255 ORTHO05D001116 1.8e-08 62.4 82 50.0
Nitab4.5_0000174g0160 Nicotiana tabacum HOM05D000255 ORTHO05D001116 1.8e-08 62.4 90 45.6
Nitab4.5_0014777g0010 Nicotiana tabacum HOM05D000255 ORTHO05D001116 1.8e-08 62.4 90 45.6
RcHm_v2.0_Chr2g0121291 Rosa chinensis HOM05D000255 ORTHO05D001116 1.8e-08 62.4 84 48.8
Thecc.08G139300 Theobroma cacao HOM05D000255 ORTHO05D001116 1.8e-08 62.4 87 47.1
GSVIVG01009987001 Vitis vinifera HOM05D000255 ORTHO05D001116 1.8e-08 62.4 89 46.1
CAN.G657.8 Capsicum annuum HOM05D000255 ORTHO05D001116 2.4e-08 62.0 90 45.6
ECA232G4043 Erigeron canadensis HOM05D000255 ORTHO05D001116 2.4e-08 62.0 90 48.9
THA.LOC104820481 Tarenaya hassleriana HOM05D000255 ORTHO05D001116 2.4e-08 62.0 90 45.6
MSTRG.24181 Avicennia marina HOM05D000255 ORTHO05D001116 3.1e-08 61.6 82 48.8
Gohir.A10G156500 Gossypium hirsutum HOM05D000255 ORTHO05D001116 3.1e-08 61.6 87 47.1
Gorai.011G119600 Gossypium raimondii HOM05D000255 ORTHO05D001116 3.1e-08 61.6 87 47.1
Nn1g06274 Nelumbo nucifera HOM05D000255 ORTHO05D001116 3.1e-08 61.6 98 43.9
PGR044G0386 Punica granatum HOM05D000255 ORTHO05D001116 3.1e-08 61.6 90 45.6
QL10p043466 Quercus lobata HOM05D000255 ORTHO05D001116 3.1e-08 61.6 90 47.8
Solyc04g064510.3 Solanum lycopersicum HOM05D000255 ORTHO05D001116 3.1e-08 61.6 90 45.6
Sopen04g026460 Solanum pennellii HOM05D000255 ORTHO05D001116 3.1e-08 61.6 90 45.6
PGSC0003DMG400024823 Solanum tuberosum HOM05D000255 ORTHO05D001116 3.1e-08 61.6 90 45.6
Gohir.D10G109100 Gossypium hirsutum HOM05D000255 ORTHO05D001116 4.1e-08 61.2 87 46.0
unitig_62.g23523 Utricularia gibba HOM05D001175 ORTHO05D003291 4.1e-08 61.2 82 50.0
HPP92_002014 Vanilla planifolia HOM05D000255 ORTHO05D001116 4.1e-08 61.2 84 50.0
Zm00001eb434560 Zea mays HOM05D000255 ORTHO05D001116 4.1e-08 61.2 88 48.9
Migut.N03248 Erythranthe guttata HOM05D000255 ORTHO05D001116 5.3e-08 60.8 82 48.8
FvH4_2g15140 Fragaria vesca HOM05D000255 ORTHO05D001116 5.3e-08 60.8 87 46.0
FAN15G3498 Fragaria x ananassa HOM05D000255 ORTHO05D001116 5.3e-08 60.8 87 46.0
FAN23G1230 Fragaria x ananassa HOM05D000255 ORTHO05D001116 5.3e-08 60.8 84 47.6
FAN24G3475 Fragaria x ananassa HOM05D000255 ORTHO05D001116 5.3e-08 60.8 87 46.0
Gorai.005G084300 Gossypium raimondii HOM05D000255 ORTHO05D001116 5.3e-08 60.8 87 47.1
HanXRQChr15g0484611 Helianthus annuus HOM05D000255 ORTHO05D001116 5.3e-08 60.8 82 48.8
Psat5g062120 Pisum sativum HOM05D000255 ORTHO05D001116 5.3e-08 60.8 82 50.0
SalBow6G0492 Salvia bowleyana HOM05D000255 ORTHO05D001116 5.3e-08 60.8 82 48.8
SGA_v2.0_scaffold19G08625 Striga asiatica HOM05D000255 ORTHO05D001116 5.3e-08 60.8 82 48.8
EL10Ac6g15293 Beta vulgaris HOM05D000255 ORTHO05D001116 7.0e-08 60.5 82 47.6
CiPaw.15G023600 Carya illinoinensis HOM05D000255 ORTHO05D001116 7.0e-08 60.5 82 48.8
ClCG08G003310 Citrullus lanatus HOM05D000255 ORTHO05D001116 7.0e-08 60.5 87 47.1
MELO3C011704.2 Cucumis melo HOM05D000255 ORTHO05D001116 7.0e-08 60.5 87 47.1
CsaV3_6G034540 Cucumis sativus L. HOM05D000255 ORTHO05D001116 7.0e-08 60.5 87 47.1
FAN20G1657 Fragaria x ananassa HOM05D000255 ORTHO05D001116 7.0e-08 60.5 87 44.8
Sc16g0003830 Simmondsia chinensis HOM05D000255 ORTHO05D001116 7.0e-08 60.5 90 45.6
Thecc.01G133300 Theobroma cacao HOM05D000255 ORTHO05D001116 7.0e-08 60.5 87 46.0
arahy.Tifrunner.gnm1.ann1.KA6U9V Arachis hypogaea HOM05D000255 ORTHO05D001116 9.1e-08 60.1 87 47.1
Duzib093G0691 Durio zibethinus HOM05D000223 ORTHO05D001289 9.1e-08 60.1 87 47.1
Duzib187G1581 Durio zibethinus HOM05D000255 ORTHO05D001116 9.1e-08 60.1 84 47.6
ECA246G0142 Erigeron canadensis HOM05D000255 ORTHO05D001116 9.1e-08 60.1 86 47.7
Peaxi162Scf00066g01712 Petunia axillaris HOM05D000255 ORTHO05D001116 9.1e-08 60.1 86 44.2
SGA_v2.0_scaffold25G11148 Striga asiatica HOM05D000255 ORTHO05D001116 9.1e-08 60.1 87 46.0
Gohir.A05G384000 Gossypium hirsutum HOM05D000255 ORTHO05D001116 1.2e-07 59.7 84 44.0
MBI03_g42545_MAGBIO Magnolia biondii HOM05D000255 ORTHO05D001116 1.2e-07 59.7 92 46.7
Medtr1g029450 Medicago truncatula HOM05D000255 ORTHO05D001116 1.2e-07 59.7 82 48.8
Medtr3g096350 Medicago truncatula HOM05D000255 ORTHO05D001116 1.2e-07 59.7 83 48.2
Psat6g039720 Pisum sativum HOM05D000255 ORTHO05D001116 1.2e-07 59.7 82 48.8
Rhsim11G0075300 Rhododendron simsii HOM05D000255 ORTHO05D001116 1.2e-07 59.7 105 41.0
Glyma.04G212400 Glycine max HOM05D000255 ORTHO05D001116 1.6e-07 59.3 87 46.0
THA.LOC104806841 Tarenaya hassleriana HOM05D000255 ORTHO05D001116 1.6e-07 59.3 90 44.4
Zm00001eb076640 Zea mays HOM05D000255 ORTHO05D001116 1.6e-07 59.3 88 48.9
Cc07_g18550 Coffea canephora HOM05D000255 ORTHO05D001116 2.0e-07 58.9 87 44.8
PSO170G4383 Papaver somniferum HOM05D000255 ORTHO05D001116 2.0e-07 58.9 84 45.2
PSO528G0023 Papaver somniferum HOM05D000255 ORTHO05D001116 2.0e-07 58.9 84 45.2
Aqoxy5G02325 Aquilegia oxysepala HOM05D000255 ORTHO05D001116 2.7e-07 58.5 90 44.4
Glyma.06G154000 Glycine max HOM05D000255 ORTHO05D001116 2.7e-07 58.5 83 47.0
ATR0584G154 Amborella trichopoda HOM05D000255 ORTHO05D001116 3.5e-07 58.2 90 45.6
Aqoxy6G00371 Aquilegia oxysepala HOM05D000255 ORTHO05D001116 3.5e-07 58.2 84 45.2
DCAR_014335 Daucus carota HOM05D000255 ORTHO05D001116 3.5e-07 58.2 82 46.3
QL09p029466 Quercus lobata HOM05D000255 ORTHO05D001116 3.5e-07 58.2 82 46.3
Actinidia20073 Actinidia chinensis HOM05D000255 ORTHO05D001116 4.5e-07 57.8 72 55.6
CiPaw.16G019000 Carya illinoinensis HOM05D000255 ORTHO05D001116 5.9e-07 57.4 82 45.1
BcaB02g11418 Brassica carinata HOM05D000255 ORTHO05D001116 7.7e-07 57.0 91 44.0
Oeu064155.1 Olea europaea HOM05D000255 ORTHO05D001116 7.7e-07 57.0 82 45.1
Prupe.8G013500 Prunus persica HOM05D000255 ORTHO05D001116 1.0e-06 56.6 84 44.0
Sed0006232 Sechium edule HOM05D000255 ORTHO05D001116 1.3e-06 56.2 82 45.1
Gohir.D04G031400 Gossypium hirsutum HOM05D000255 ORTHO05D001116 1.7e-06 55.8 84 41.7
Gorai.012G035500 Gossypium raimondii HOM05D000255 ORTHO05D001116 1.7e-06 55.8 84 41.7
HanXRQChr05g0160451 Helianthus annuus HOM05D000255 ORTHO05D001116 1.7e-06 55.8 94 45.7
Sabra07G0086300 Salix brachista HOM05D000255 ORTHO05D001116 1.7e-06 55.8 109 38.5
Phvul.009G151300 Phaseolus vulgaris HOM05D000255 ORTHO05D001116 2.2e-06 55.5 87 43.7
SEGI_01036 Sequoiadendron giganteum HOM05D000255 ORTHO05D001116 2.9e-06 55.1 82 43.9
MBI06_g27442_MAGBIO Magnolia biondii HOM05D000255 ORTHO05D001116 3.8e-06 54.7 86 50.0
ATR0043G052 Amborella trichopoda HOM05D000255 ORTHO05D001116 5.0e-06 54.3 90 40.0


User provided reference genes

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