Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7417N6 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.4e-117 426.4 228 100.0
arahy.Tifrunner.gnm1.ann1.S1NDRU Arachis hypogaea HOM05D004487 ORTHO05D005483 5.4e-114 414.5 228 96.9
arahy.Tifrunner.gnm1.ann1.0Q3DRY Arachis hypogaea HOM05D004487 ORTHO05D005483 7.1e-114 414.1 228 92.1
arahy.Tifrunner.gnm1.ann1.Z7G166 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.1e-113 412.5 228 92.5
arahy.Tifrunner.gnm1.ann1.NRP8RH Arachis hypogaea HOM05D004487 ORTHO05D005483 3.6e-110 401.7 220 90.9
arahy.Tifrunner.gnm1.ann1.10QJ8K Arachis hypogaea HOM05D004487 ORTHO05D005483 2.0e-108 396.0 218 90.4
arahy.Tifrunner.gnm1.ann1.Y72RXW Arachis hypogaea HOM05D004487 ORTHO05D005483 9.6e-103 377.1 228 86.0
arahy.Tifrunner.gnm1.ann1.32WU9K Arachis hypogaea HOM05D004487 ORTHO05D005483 6.0e-89 331.3 202 83.7
arahy.Tifrunner.gnm1.ann1.L7ETT7 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.8e-80 303.1 170 88.2
arahy.Tifrunner.gnm1.ann1.9RVJ5A Arachis hypogaea HOM05D004487 ORTHO05D005483 1.8e-77 293.1 201 76.6
arahy.Tifrunner.gnm1.ann1.I45DC0 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.6e-76 289.3 233 69.1
Lalb_Chr11g0075201 Lupinus albus HOM05D004487 ORTHO05D005483 4.2e-74 282.0 222 66.7
Lj3g0008934 Lotus japonicus HOM05D004487 ORTHO05D005483 5.7e-71 271.6 231 65.4
Ca_23004_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 3.1e-69 265.8 224 64.3
arahy.Tifrunner.gnm1.ann1.ZIF87W Arachis hypogaea HOM05D004487 ORTHO05D005483 5.5e-66 255.0 189 73.0
Ca_25628_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 1.2e-65 253.8 220 62.3
Glyma.15G199500 Glycine max HOM05D004487 ORTHO05D005483 7.9e-65 251.1 227 60.8
Phvul.009G211400 Phaseolus vulgaris HOM05D004487 ORTHO05D005483 6.7e-64 248.1 227 59.0
Glyma.09G092600 Glycine max HOM05D004487 ORTHO05D005483 1.4e-61 240.4 228 59.2
TPR.G33715 Trifolium pratense HOM05D004487 ORTHO05D005483 1.5e-60 236.9 229 56.3
QL06p033465 Quercus lobata HOM05D004487 ORTHO05D005483 3.5e-60 235.7 205 59.5
MD15G1334800 Malus domestica HOM05D004487 ORTHO05D005483 3.3e-55 219.2 220 54.5
Thecc.01G110300 Theobroma cacao HOM05D004487 ORTHO05D005483 5.7e-55 218.4 216 53.2
GSVIVG01022203001 Vitis vinifera HOM05D004487 ORTHO05D005483 1.3e-54 217.2 229 51.1
MD01G1016500 Malus domestica HOM05D004487 ORTHO05D005483 2.2e-54 216.5 220 54.1
Manes.12G140400 Manihot esculenta HOM05D004487 ORTHO05D005483 2.2e-54 216.5 215 55.8
Gorai.007G062000 Gossypium raimondii HOM05D004487 ORTHO05D005483 3.7e-54 215.7 203 56.2
Duzib147G1438 Durio zibethinus HOM05D004487 ORTHO05D005483 4.8e-54 215.3 206 55.8
TAR625G1215 Trochodendron aralioides HOM05D004487 ORTHO05D005483 6.3e-54 214.9 221 52.9
Nn8g40276 Nelumbo nucifera HOM05D004487 ORTHO05D005483 1.4e-53 213.8 203 53.7
CiPaw.04G093900 Carya illinoinensis HOM05D004487 ORTHO05D005483 1.8e-53 213.4 219 53.4
VMungo1309G0247 Vigna mungo HOM05D004487 ORTHO05D005483 3.1e-53 212.6 227 52.4
arahy.Tifrunner.gnm1.ann1.4M30AQ Arachis hypogaea HOM05D004487 ORTHO05D005483 7.0e-53 211.5 182 67.0
Psat2g176760 Pisum sativum HOM05D004487 ORTHO05D005483 7.0e-53 211.5 203 57.1
Gohir.A11G053300 Gossypium hirsutum HOM05D004487 ORTHO05D005483 9.1e-53 211.1 206 54.9
arahy.Tifrunner.gnm1.ann1.02EUR6 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.0e-52 209.9 121 85.1
vmacro21317 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 2.0e-52 209.9 220 50.0
Gohir.D11G056800 Gossypium hirsutum HOM05D004487 ORTHO05D005483 3.5e-52 209.1 206 54.4
CANSAT01G2370 Cannabis sativa HOM05D004487 ORTHO05D005483 4.5e-52 208.8 224 50.9
Nitab4.5_0007717g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 4.5e-52 208.8 226 49.6
vmacro18624 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 4.5e-52 208.8 223 48.9
Ciclev10026392m.g Citrus clementina HOM05D004487 ORTHO05D005483 1.3e-51 207.2 220 50.5
Migut.H01422 Erythranthe guttata HOM05D004487 ORTHO05D005483 1.7e-51 206.8 203 53.7
Nitab4.5_0001495g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.7e-51 206.8 226 50.0
COL.COLO4_11036 Corchorus olitorius HOM05D004487 ORTHO05D005483 2.2e-51 206.5 236 47.9
PGSC0003DMG400015213 Solanum tuberosum HOM05D004487 ORTHO05D005483 2.2e-51 206.5 201 54.2
Haze_05964 Corylus avellana HOM05D004487 ORTHO05D005483 2.9e-51 206.1 230 50.0
Prupe.8G078400 Prunus persica HOM05D004487 ORTHO05D005483 2.9e-51 206.1 222 52.3
Atru.chr3.204 Acer truncatum HOM05D004487 ORTHO05D005483 1.1e-50 204.1 228 49.6
Sopen03g029710 Solanum pennellii HOM05D004487 ORTHO05D005483 1.9e-50 203.4 201 53.2
Nn2g14563 Nelumbo nucifera HOM05D004487 ORTHO05D005483 3.2e-50 202.6 231 48.9
PGR004G1100 Punica granatum HOM05D004487 ORTHO05D005483 3.2e-50 202.6 220 49.1
Solyc03g019910.3 Solanum lycopersicum HOM05D004487 ORTHO05D005483 5.5e-50 201.8 201 53.7
CAN.G861.28 Capsicum annuum HOM05D004487 ORTHO05D005483 4.7e-49 198.7 221 48.9
CsaV3_6G045820 Cucumis sativus L. HOM05D004487 ORTHO05D005483 4.7e-49 198.7 203 52.7
TWI74G0090 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 4.7e-49 198.7 203 52.2
MELO3C007790.2 Cucumis melo HOM05D004487 ORTHO05D005483 1.4e-48 197.2 203 52.2
Peaxi162Scf00171g00006 Petunia axillaris HOM05D004487 ORTHO05D005483 1.4e-48 197.2 235 46.8
HanXRQChr14g0458831 Helianthus annuus HOM05D004487 ORTHO05D005483 4.0e-48 195.7 204 51.0
MSTRG.14740 Avicennia marina HOM05D004487 ORTHO05D005483 5.2e-48 195.3 203 50.7
Rhsim05G0180000 Rhododendron simsii HOM05D004487 ORTHO05D005483 6.8e-48 194.9 211 48.3
CsaV3_5G036000 Cucumis sativus L. HOM05D004487 ORTHO05D005483 8.8e-48 194.5 208 51.4
Gohir.1Z049552 Gossypium hirsutum HOM05D004487 ORTHO05D005483 8.8e-48 194.5 176 57.4
CSS0025780 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 2.6e-47 193.0 232 49.1
Prupe.6G176600 Prunus persica HOM05D004487 ORTHO05D005483 9.8e-47 191.0 220 50.5
Eucgr.I00528 Eucalyptus grandis HOM05D004487 ORTHO05D005483 1.3e-46 190.7 209 48.8
FvH4_1g21950 Fragaria vesca HOM05D004487 ORTHO05D005483 4.8e-46 188.7 226 48.2
Lsat_1_v5_gn_2_120680 Lactuca sativa HOM05D004487 ORTHO05D005483 4.8e-46 188.7 231 44.6
TPR.G36682 Trifolium pratense HOM05D005330 ORTHO05D006489 6.3e-46 188.3 224 50.9
Oeu040918.3 Olea europaea HOM05D004487 ORTHO05D005483 1.1e-45 187.6 277 40.8
Potri.007G085100 Populus trichocarpa HOM05D004487 ORTHO05D005483 1.1e-45 187.6 230 50.9
arahy.Tifrunner.gnm1.ann1.RJV3W7 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.4e-45 187.2 114 85.1
AUR62005250 Chenopodium quinoa HOM05D004487 ORTHO05D005483 2.4e-45 186.4 203 49.3
ECA238G1615 Erigeron canadensis HOM05D004487 ORTHO05D005483 3.1e-45 186.0 222 46.8
AUR62000713 Chenopodium quinoa HOM05D004487 ORTHO05D005483 4.1e-45 185.7 203 49.8
ClCG01G019130 Citrullus lanatus HOM05D004487 ORTHO05D005483 4.1e-45 185.7 197 50.3
RcHm_v2.0_Chr2g0115971 Rosa chinensis HOM05D004487 ORTHO05D005483 5.4e-45 185.3 220 46.8
Aa31LG6G15640 Aethionema arabicum HOM05D004487 ORTHO05D005483 2.0e-44 183.3 202 51.0
arahy.Tifrunner.gnm1.ann1.3C43J1 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.0e-44 183.3 114 83.3
Cc02_g15410 Coffea canephora HOM05D004487 ORTHO05D005483 2.0e-44 183.3 203 49.3
FvH4_1g25670 Fragaria vesca HOM05D004487 ORTHO05D005483 2.0e-44 183.3 220 47.7
arahy.Tifrunner.gnm1.ann1.PFH739 Arachis hypogaea HOM05D004487 ORTHO05D005483 4.5e-44 182.2 90 94.4
Nitab4.5_0000477g0120 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.0e-43 181.0 196 50.5
FAN28G1272 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.9e-43 179.5 222 45.5
FAN28G1914 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.9e-43 179.5 222 45.5
Sabra07G0070400 Salix brachista HOM05D004487 ORTHO05D005483 5.0e-43 178.7 234 47.0
FAN19G1427 Fragaria x ananassa HOM05D004487 ORTHO05D005483 6.5e-43 178.3 221 46.2
FAN23G0375 Fragaria x ananassa HOM05D004487 ORTHO05D005483 6.5e-43 178.3 221 46.2
Lj2A942G27 Lonicera japonica HOM05D004487 ORTHO05D005483 6.5e-43 178.3 202 53.0
arahy.Tifrunner.gnm1.ann1.PL6VNF Arachis hypogaea HOM05D004487 ORTHO05D005483 1.1e-42 177.6 90 93.3
EL10Ac4g09863 Beta vulgaris HOM05D004487 ORTHO05D005483 1.1e-42 177.6 221 44.3
MELO3C012399.2 Cucumis melo HOM05D004487 ORTHO05D005483 4.2e-42 175.6 224 46.9
Hma1.2p1_0486F.1_g163280 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 5.5e-42 175.3 235 45.5
FAN26G2580 Fragaria x ananassa HOM05D004487 ORTHO05D005483 7.2e-42 174.9 221 45.2
unitig_22.g6757 Utricularia gibba HOM05D004487 ORTHO05D005483 1.2e-41 174.1 198 48.5
FAN19G3081 Fragaria x ananassa HOM05D004487 ORTHO05D005483 1.6e-41 173.7 214 46.3
Ah.04g161200 Amaranthus hybridus HOM05D004487 ORTHO05D005483 2.3e-40 169.9 219 43.4
THA.LOC104807718 Tarenaya hassleriana HOM05D004487 ORTHO05D005483 2.3e-40 169.9 217 53.0
Lj6g0018564 Lotus japonicus HOM05D004487 ORTHO05D005483 4.0e-40 169.1 110 77.3
ClCG05G021300 Citrullus lanatus HOM05D004487 ORTHO05D005483 5.2e-40 168.7 204 49.0
Sp7g04740 Schrenkiella parvula HOM05D004487 ORTHO05D005483 8.8e-40 167.9 195 47.2
Actinidia08329 Actinidia chinensis HOM05D004487 ORTHO05D005483 1.2e-39 167.5 171 50.3
DCAR_014253 Daucus carota HOM05D004487 ORTHO05D005483 1.2e-39 167.5 218 43.6
SGA_v2.0_scaffold106G30591 Striga asiatica HOM05D004487 ORTHO05D005483 2.0e-39 166.8 197 48.7
AL7G11780 Arabidopsis lyrata HOM05D004487 ORTHO05D005483 3.4e-39 166.0 226 50.0
Carub.0007s0150 Capsella rubella HOM05D004487 ORTHO05D005483 9.8e-39 164.5 222 46.4
MBI04_g31212_MAGBIO Magnolia biondii HOM05D004487 ORTHO05D005483 9.8e-39 164.5 186 48.4
Thhalv10027902m.g Eutrema salsugineum HOM05D004487 ORTHO05D005483 1.7e-38 163.7 199 46.2
Lj2A929T16 Lonicera japonica HOM05D004487 ORTHO05D005483 2.8e-38 162.9 202 54.5
Nitab4.5_0007222g0010 Nicotiana tabacum HOM05D004487 ORTHO05D005483 4.1e-37 159.1 196 48.5
Aqoxy2G03854 Aquilegia oxysepala HOM05D004487 ORTHO05D005483 1.2e-36 157.5 212 46.2
CARHR215520 Cardamine hirsuta HOM05D004487 ORTHO05D005483 1.6e-36 157.1 200 52.0
Potri.005G082500 Populus trichocarpa HOM05D004487 ORTHO05D005483 1.6e-36 157.1 232 44.8
Hma1.2p1_0375F.1_g138570 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 5.0e-35 152.1 117 65.0
TAR626G1474 Trochodendron aralioides HOM05D004487 ORTHO05D005483 5.0e-35 152.1 221 42.5
Actinidia33369 Actinidia chinensis HOM05D004487 ORTHO05D005483 1.1e-34 151.0 173 48.0
Sc16g0008840 Simmondsia chinensis HOM05D004487 ORTHO05D005483 4.2e-34 149.1 212 40.1
BolC4t26003H Brassica oleracea HOM05D004487 ORTHO05D005483 2.8e-33 146.4 228 40.8
AT4G39630 Arabidopsis thaliana HOM05D004487 ORTHO05D005483 3.6e-33 146.0 216 47.2
BcaC02g09572 Brassica carinata HOM05D004487 ORTHO05D005483 4.7e-33 145.6 218 41.3
C04p44290 Brassica napus HOM05D004487 ORTHO05D005483 5.2e-32 142.1 217 41.0
A04p10610 Brassica napus HOM05D004487 ORTHO05D005483 4.4e-31 139.0 214 40.7
BraA04t16724Z Brassica rapa HOM05D004487 ORTHO05D005483 7.5e-31 138.3 222 39.6
arahy.Tifrunner.gnm1.ann1.FJ4QJG Arachis hypogaea HOM05D004487 ORTHO05D005483 1.7e-30 137.1 90 82.2
HanXRQChr07g0202331 Helianthus annuus HOM05D004487 ORTHO05D005483 2.9e-30 136.3 165 43.0
arahy.Tifrunner.gnm1.ann1.94164M Arachis hypogaea HOM05D004487 ORTHO05D005483 4.9e-30 135.6 90 81.1
CDE04G3174 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 6.3e-30 135.2 225 37.8
ATR0210G008 Amborella trichopoda HOM05D004487 ORTHO05D005483 7.0e-29 131.7 220 40.5
BcaB06g27071 Brassica carinata HOM05D004487 ORTHO05D005483 7.0e-29 131.7 203 42.9
CARHR247100 Cardamine hirsuta HOM05D004487 ORTHO05D005483 7.0e-29 131.7 195 47.7
Lj4A903G12 Lonicera japonica HOM05D004487 ORTHO05D005483 7.8e-28 128.3 171 45.6
arahy.Tifrunner.gnm1.ann1.E9WDF1 Arachis hypogaea HOM05D004487 ORTHO05D005483 5.0e-27 125.6 111 64.0
Os08g0290400 Oryza sativa ssp. japonica HOM05D004487 ORTHO05D005483 8.6e-27 124.8 202 37.6
Zm00001eb192330 Zea mays HOM05D004487 ORTHO05D005483 2.5e-26 123.2 196 40.3
Sp7g36260 Schrenkiella parvula HOM05D004487 ORTHO05D005483 5.6e-26 122.1 199 48.2
SHI54251 Sapria himalayana HOM05D004487 ORTHO05D005483 1.2e-25 120.9 216 38.9
Psat4g139920 Pisum sativum HOM05D004487 ORTHO05D005483 1.6e-25 120.6 149 47.0
CDE04G3300 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 1.4e-24 117.5 171 40.4
CSS0002847 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 3.1e-24 116.3 98 65.3
Psat4g139880 Pisum sativum HOM05D004487 ORTHO05D005483 3.1e-24 116.3 137 48.2
SEGI_02201 Sequoiadendron giganteum HOM05D004487 ORTHO05D005483 6.8e-24 115.2 212 35.8
Dinv13358 Davidia involucrata HOM05D004487 ORTHO05D005483 8.9e-24 114.8 148 41.2
TWI53G0384 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 8.9e-24 114.8 83 65.1
Sabra05G0067500 Salix brachista HOM05D004487 ORTHO05D005483 1.4e-21 107.5 227 35.7
arahy.Tifrunner.gnm1.ann1.X4R883 Arachis hypogaea HOM05D004487 ORTHO05D005483 4.1e-21 105.9 52 94.2
Dinv05687 Davidia involucrata HOM05D004487 ORTHO05D005483 5.4e-21 105.5 133 42.9
HPP92_005242 Vanilla planifolia HOM05D004487 ORTHO05D005483 1.6e-20 104.0 201 34.8
Sed0026038 Sechium edule HOM05D004487 ORTHO05D005483 4.7e-17 92.4 149 38.9
CDE06G2627 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 7.1e-13 78.6 155 32.9
Oeu043116.1 Olea europaea HOM05D004487 ORTHO05D005483 3.5e-12 76.3 158 33.5
Lalb_Chr12g0203581 Lupinus albus HOM05D004487 ORTHO05D005483 2.3e-11 73.6 74 55.4
SGA_v2.0_scaffold83G26423 Striga asiatica HOM05D004487 ORTHO05D005483 2.3e-11 73.6 92 43.5
CSS0022213 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 1.9e-10 70.5 50 78.0
CSS0015836 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 9.5e-10 68.2 39 89.7
FAN26G0673 Fragaria x ananassa HOM05D004487 ORTHO05D005483 4.7e-09 65.9 130 34.6


User provided reference genes

Program Settings