Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 9.6e-63 243.4 132 100.0
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 1.7e-59 232.6 129 97.7
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 2.1e-49 199.1 132 84.1
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 2.3e-48 195.7 132 81.1
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 5.1e-48 194.5 132 81.8
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 8.7e-48 193.7 132 81.1
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 1.1e-47 193.4 132 81.1
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 8.2e-46 187.2 132 79.5
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 1.8e-45 186.0 132 77.3
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 2.4e-45 185.7 132 78.8
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 2.6e-44 182.2 122 80.3
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 2.6e-44 182.2 132 75.0
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 1.0e-43 180.3 121 79.3
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 3.8e-43 178.3 123 77.2
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 3.8e-43 178.3 123 76.4
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 3.8e-43 178.3 120 76.7
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 4.9e-43 177.9 132 74.2
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 8.4e-43 177.2 130 72.3
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 1.1e-42 176.8 123 74.8
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.1e-42 176.8 130 74.6
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 1.4e-42 176.4 125 75.2
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 2.5e-42 175.6 119 79.0
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 3.2e-42 175.3 120 78.3
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 3.2e-42 175.3 129 72.1
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 3.2e-42 175.3 130 73.8
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 4.2e-42 174.9 130 73.1
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 7.1e-42 174.1 120 76.7
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 9.3e-42 173.7 119 79.8
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 9.3e-42 173.7 119 79.8
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 2.7e-41 172.2 119 79.8
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 4.6e-41 171.4 114 79.8
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 6.0e-41 171.0 120 75.0
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 7.9e-41 170.6 127 72.4
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 1.0e-40 170.2 130 73.8
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.0e-40 170.2 121 74.4
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 1.0e-40 170.2 124 71.8
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.3e-40 169.9 124 75.0
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 1.3e-40 169.9 118 75.4
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 1.3e-40 169.9 135 71.9
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 1.8e-40 169.5 120 75.8
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 1.8e-40 169.5 120 76.7
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 2.3e-40 169.1 117 76.1
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 3.0e-40 168.7 113 78.8
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 3.9e-40 168.3 116 79.3
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 6.7e-40 167.5 115 78.3
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 6.7e-40 167.5 118 77.1
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 8.7e-40 167.2 109 81.7
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 8.7e-40 167.2 116 75.9
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 1.5e-39 166.4 129 72.9
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 1.9e-39 166.0 129 72.1
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 2.5e-39 165.6 128 71.1
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 3.3e-39 165.2 132 70.5
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 3.3e-39 165.2 135 70.4
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 3.3e-39 165.2 120 73.3
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 5.7e-39 164.5 114 72.8
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 5.7e-39 164.5 114 72.8
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 7.4e-39 164.1 127 70.9
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 9.7e-39 163.7 128 71.1
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 9.7e-39 163.7 128 71.1
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 9.7e-39 163.7 128 71.1
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 1.6e-38 162.9 128 71.1
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 1.6e-38 162.9 128 71.1
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.6e-38 162.9 113 75.2
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 1.6e-38 162.9 113 75.2
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 4.8e-38 161.4 118 74.6
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 6.3e-38 161.0 119 72.3
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 6.3e-38 161.0 121 72.7
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.4e-37 159.8 110 77.3
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 1.8e-37 159.5 121 70.2
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 3.1e-37 158.7 116 72.4
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 3.1e-37 158.7 130 67.7
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 5.3e-37 157.9 104 81.7
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 5.3e-37 157.9 147 61.9
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 6.9e-37 157.5 110 76.4
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 6.9e-37 157.5 144 62.5
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 1.2e-36 156.8 115 73.9
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 1.5e-36 156.4 113 74.3
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 2.0e-36 156.0 113 74.3
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.6e-36 155.6 104 80.8
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 7.6e-36 154.1 125 70.4
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.0e-35 153.7 107 75.7
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 1.7e-35 152.9 117 69.2
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 2.9e-35 152.1 113 73.5
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 2.9e-35 152.1 124 66.9
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 3.8e-35 151.8 114 71.1
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 5.0e-35 151.4 119 68.9
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 1.9e-34 149.4 166 54.8
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 3.7e-30 135.2 119 57.1
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 6.3e-30 134.4 119 64.7
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 8.2e-30 134.0 102 69.6
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 2.4e-29 132.5 114 64.9
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 3.1e-29 132.1 126 62.7
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 7.7e-28 127.5 109 66.1
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 3.8e-27 125.2 120 62.5
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 3.8e-27 125.2 122 56.6
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 4.2e-26 121.7 107 63.6
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 9.4e-26 120.6 88 73.9
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 5.1e-24 114.8 118 60.2
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.1e-23 113.6 103 64.1
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.3e-19 100.1 111 55.0
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 8.5e-19 97.4 66 74.2
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 1.1e-18 97.1 69 69.6
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 9.4e-18 94.0 119 45.4
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 1.4e-16 90.1 106 55.7
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-16 89.7 106 44.3
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 3.9e-16 88.6 109 49.5
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 9.1e-13 77.4 54 77.8
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 4.4e-07 58.5 61 54.1
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 5.7e-07 58.2 54 53.7


User provided reference genes

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