Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 0.0e+00 1359.4 747 100.0
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 0.0e+00 1316.6 747 97.1
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 6.6e-310 1067.0 748 76.2
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 1.5e-306 1055.8 748 75.8
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 5.1e-286 987.6 753 71.7
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 2.4e-283 978.8 747 70.8
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 3.9e-278 961.4 747 70.1
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 2.4e-272 942.2 750 69.3
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 2.9e-265 918.7 754 65.6
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 8.4e-265 917.1 749 68.5
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 1.8e-262 909.4 783 63.9
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 1.5e-261 906.4 754 65.9
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 1.5e-258 896.3 754 64.5
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 3.8e-257 891.7 752 64.9
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 1.1e-256 890.2 756 64.6
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 3.6e-255 885.2 750 63.6
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 3.0e-254 882.1 751 63.5
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 3.9e-254 881.7 755 63.7
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 5.1e-254 881.3 751 63.5
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.3e-252 876.7 763 62.9
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 2.2e-252 875.9 753 62.5
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 6.3e-252 874.4 754 63.1
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 1.4e-251 873.2 749 63.2
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 6.5e-249 864.4 757 62.7
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 8.5e-249 864.0 784 61.1
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 1.1e-248 863.6 750 63.1
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 1.1e-248 863.6 757 62.2
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.4e-248 863.2 754 61.8
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 1.4e-248 863.2 752 62.4
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 1.8e-246 856.3 757 61.8
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 2.3e-246 855.9 757 61.7
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 6.7e-246 854.4 756 62.7
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 1.5e-245 853.2 751 61.9
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 2.6e-245 852.4 750 62.5
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 2.8e-244 849.0 757 61.6
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 3.1e-243 845.5 750 62.3
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 2.0e-242 842.8 756 61.9
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 7.7e-242 840.9 755 61.1
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 2.2e-241 839.3 756 59.7
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 1.9e-240 836.3 753 60.8
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 7.2e-240 834.3 756 59.8
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 8.0e-239 830.9 753 63.3
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 1.4e-235 820.1 720 62.8
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 3.1e-235 818.9 754 58.4
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 1.0e-233 813.9 754 58.2
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 1.1e-232 810.4 752 59.0
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 2.5e-232 809.3 749 60.7
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 2.3e-230 802.7 752 59.2
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 4.0e-230 802.0 754 59.3
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 1.5e-229 800.0 748 58.6
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.7e-228 796.6 749 59.1
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 4.5e-226 788.5 749 56.6
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 7.7e-226 787.7 749 58.7
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 4.2e-224 781.9 753 60.0
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 5.5e-224 781.6 749 56.7
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 1.0e-222 777.3 786 56.5
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.4e-222 776.9 757 57.1
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 6.3e-220 768.1 749 56.1
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 6.3e-220 768.1 755 56.6
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 8.3e-220 767.7 590 71.0
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 1.6e-218 763.5 749 54.9
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 2.9e-217 759.2 758 55.3
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 3.8e-217 758.8 755 56.0
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 3.8e-217 758.8 758 55.3
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 5.0e-217 758.4 753 56.7
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 6.6e-217 758.1 758 55.3
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 6.6e-217 758.1 753 56.6
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 1.1e-216 757.3 753 56.7
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 1.5e-216 756.9 754 56.4
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 2.5e-216 756.1 759 55.7
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 4.2e-216 755.4 753 56.4
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 4.7e-215 751.9 760 55.7
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 9.2e-211 737.6 751 57.3
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 3.5e-210 735.7 755 56.3
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 1.3e-209 733.8 764 54.5
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 4.3e-208 728.8 799 51.9
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 2.8e-207 726.1 764 53.7
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 5.2e-206 721.8 763 53.5
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 1.3e-204 717.2 751 53.4
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 6.4e-204 714.9 793 54.2
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 6.6e-201 704.9 764 54.8
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 3.0e-193 679.5 674 55.0
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 2.5e-192 676.4 582 62.9
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 2.3e-190 669.8 539 69.4
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 1.1e-184 651.0 438 75.8
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.2e-183 647.5 755 49.9
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 2.9e-180 636.3 748 48.3
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 1.1e-179 634.4 760 47.5
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 1.9e-179 633.6 677 52.1
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 3.4e-165 586.3 592 56.1
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 6.4e-164 582.0 470 65.5
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 7.1e-163 578.6 748 52.0
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 4.0e-158 562.8 755 45.7
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 6.9e-158 562.0 472 64.4
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.5e-152 544.3 468 62.0
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 1.6e-146 524.2 636 48.6
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.6e-146 524.2 673 46.8
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 7.9e-146 521.9 588 52.2
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 1.7e-127 461.1 437 57.0
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 9.1e-126 455.3 437 56.5
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 2.9e-108 397.1 869 34.8
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 3.2e-107 393.7 776 34.4
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 9.8e-80 302.4 286 59.8
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 2.9e-71 274.2 747 30.8
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 1.9e-70 271.6 359 43.7
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 3.2e-70 270.8 595 31.8
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 2.1e-69 268.1 205 67.3
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 8.1e-66 256.1 265 54.3
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 5.4e-62 243.4 196 64.3
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 2.3e-52 211.5 167 66.5
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.3e-50 205.7 169 59.8
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 3.9e-44 184.1 839 23.2
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 2.8e-42 177.9 167 58.1
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 6.3e-26 123.6 145 53.1
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 2.2e-23 115.2 192 37.0
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 9.4e-22 109.8 112 58.0
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 6.7e-20 103.6 134 48.5
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 6.5e-15 87.0 127 44.1
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 8.8e-12 76.6 68 54.4
Psat5g059800 Pisum sativum HOM05D000380 ORTHO05D320631 2.9e-07 61.6 30 93.3
Psat5g059840 Pisum sativum HOM05D000434 ORTHO05D007220 7.2e-06 57.0 29 86.2


User provided reference genes

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