Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 1.0e-85 320.1 164 100.0
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 2.2e-56 222.6 130 88.5
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 1.5e-49 199.9 118 84.7
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 1.7e-45 186.4 104 91.3
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 2.4e-31 139.4 98 69.4
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 4.1e-31 138.7 98 69.4
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 7.0e-31 137.9 98 70.4
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 1.2e-30 137.1 98 68.4
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 1.2e-30 137.1 100 68.0
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 1.6e-30 136.7 110 62.7
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 2.7e-30 136.0 98 68.4
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 3.5e-30 135.6 100 68.0
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 4.6e-30 135.2 100 67.0
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 6.0e-30 134.8 103 64.1
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 6.0e-30 134.8 100 63.0
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 6.0e-30 134.8 98 67.3
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 1.0e-29 134.0 103 66.0
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 1.0e-29 134.0 108 61.1
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 1.0e-29 134.0 98 67.3
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.3e-29 133.7 103 62.1
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 1.7e-29 133.3 98 67.3
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 1.7e-29 133.3 103 63.1
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 3.0e-29 132.5 103 63.1
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 3.0e-29 132.5 98 65.3
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 3.0e-29 132.5 100 65.0
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 3.9e-29 132.1 100 64.0
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 5.0e-29 131.7 98 65.3
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 5.0e-29 131.7 100 68.0
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 5.0e-29 131.7 103 63.1
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 5.0e-29 131.7 109 59.6
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 6.6e-29 131.3 98 64.3
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 6.6e-29 131.3 103 61.2
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 6.6e-29 131.3 119 59.7
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 6.6e-29 131.3 100 63.0
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 1.1e-28 130.6 101 64.4
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 1.1e-28 130.6 108 60.2
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 1.5e-28 130.2 107 60.7
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 1.9e-28 129.8 98 63.3
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 2.5e-28 129.4 98 63.3
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 2.5e-28 129.4 108 60.2
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 3.3e-28 129.0 98 66.3
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 4.3e-28 128.6 100 61.0
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 5.6e-28 128.3 98 64.3
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 7.3e-28 127.9 98 66.3
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 7.3e-28 127.9 98 65.3
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 9.5e-28 127.5 103 59.2
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 9.5e-28 127.5 108 62.0
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 1.2e-27 127.1 98 63.3
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 1.2e-27 127.1 100 65.0
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 1.2e-27 127.1 100 63.0
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 1.6e-27 126.7 101 60.4
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 1.6e-27 126.7 98 60.2
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 1.6e-27 126.7 98 61.2
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 2.8e-27 125.9 108 59.3
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 2.8e-27 125.9 98 64.3
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 3.6e-27 125.6 99 62.6
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 3.6e-27 125.6 98 61.2
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 4.7e-27 125.2 98 65.3
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 4.7e-27 125.2 160 46.9
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 6.2e-27 124.8 111 57.7
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 6.2e-27 124.8 103 60.2
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 8.1e-27 124.4 100 59.0
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 8.1e-27 124.4 101 61.4
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 8.1e-27 124.4 98 62.2
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 1.1e-26 124.0 97 59.8
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 1.1e-26 124.0 98 63.3
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 1.4e-26 123.6 108 58.3
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 1.8e-26 123.2 113 54.9
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 1.8e-26 123.2 101 59.4
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 1.8e-26 123.2 98 64.3
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.8e-26 123.2 98 64.3
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 1.8e-26 123.2 98 61.2
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 2.3e-26 122.9 98 62.2
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 3.1e-26 122.5 99 58.6
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 3.1e-26 122.5 98 64.3
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 4.0e-26 122.1 100 60.0
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 4.0e-26 122.1 104 59.6
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 4.0e-26 122.1 101 59.4
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 4.0e-26 122.1 98 61.2
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 4.0e-26 122.1 101 58.4
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 5.2e-26 121.7 100 60.0
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 5.2e-26 121.7 108 57.4
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 5.2e-26 121.7 100 60.0
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 6.8e-26 121.3 109 55.0
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 6.8e-26 121.3 104 60.6
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 6.8e-26 121.3 98 61.2
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 6.8e-26 121.3 99 59.6
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 8.9e-26 120.9 97 60.8
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 1.2e-25 120.6 97 63.9
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 1.2e-25 120.6 109 54.1
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.2e-25 120.6 98 63.3
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 1.5e-25 120.2 100 59.0
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 1.5e-25 120.2 109 55.0
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 1.5e-25 120.2 109 55.0
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 1.5e-25 120.2 109 55.0
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 1.5e-25 120.2 100 60.0
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 2.0e-25 119.8 100 64.0
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 2.0e-25 119.8 100 60.0
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 3.4e-25 119.0 98 58.2
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 3.4e-25 119.0 98 58.2
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 3.4e-25 119.0 100 63.0
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 3.4e-25 119.0 98 62.2
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 4.4e-25 118.6 97 59.8
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 5.8e-25 118.2 103 59.2
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 5.8e-25 118.2 97 59.8
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 5.8e-25 118.2 100 55.0
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 7.5e-25 117.9 100 61.0
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 2.2e-24 116.3 100 63.0
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 2.9e-24 115.9 98 60.2
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 2.9e-24 115.9 105 57.1
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 3.7e-24 115.5 98 58.2
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 3.7e-24 115.5 97 57.7
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 4.9e-24 115.2 97 56.7
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 4.9e-24 115.2 97 57.7
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 4.9e-24 115.2 97 57.7
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 4.9e-24 115.2 97 57.7
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 4.9e-24 115.2 127 52.8
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 8.3e-24 114.4 97 56.7
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 2.4e-23 112.8 98 59.2
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 1.6e-22 110.2 117 52.1
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 1.9e-20 103.2 59 89.8
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 1.7e-13 80.1 98 44.9
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 1.2e-11 73.9 67 52.2
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 1.6e-11 73.6 95 45.3
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 4.7e-11 72.0 52 63.5
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 8.1e-11 71.2 87 46.0


User provided reference genes

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