Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb329240 Zea mays HOM05D004745 ORTHO05D005626 1.3e-126 456.4 232 100.0
Os01g0555800 Oryza sativa ssp. japonica HOM05D004745 ORTHO05D005626 6.9e-48 194.9 199 61.8
arahy.Tifrunner.gnm1.ann1.Q3QYYY Arachis hypogaea HOM05D004745 ORTHO05D005626 7.4e-34 148.3 178 51.1
Phvul.010G154200 Phaseolus vulgaris HOM05D004745 ORTHO05D005626 9.6e-34 147.9 142 57.7
Oeu000434.1 Olea europaea HOM05D004745 ORTHO05D005626 1.6e-33 147.1 174 48.9
Rhsim08G0215400 Rhododendron simsii HOM05D004745 ORTHO05D005626 2.1e-33 146.7 121 63.6
arahy.Tifrunner.gnm1.ann1.EYL5YU Arachis hypogaea HOM05D004745 ORTHO05D005626 2.8e-33 146.4 178 50.6
Glyma.08G210900 Glycine max HOM05D004745 ORTHO05D005626 4.8e-33 145.6 152 53.9
Lalb_Chr01g0012481 Lupinus albus HOM05D004745 ORTHO05D005626 4.8e-33 145.6 109 67.9
TPR.G38663 Trifolium pratense HOM05D004745 ORTHO05D005626 6.2e-33 145.2 149 57.7
VMungo0331G1340 Vigna mungo HOM05D004745 ORTHO05D005626 6.2e-33 145.2 155 54.2
Prupe.3G081800 Prunus persica HOM05D004745 ORTHO05D005626 1.1e-32 144.4 112 67.0
PGR102G0579 Punica granatum HOM05D004745 ORTHO05D005626 2.4e-32 143.3 112 67.9
Peaxi162Scf00320g00620 Petunia axillaris HOM05D004745 ORTHO05D005626 3.1e-32 142.9 175 48.6
Hund06573 Selenicereus undatus HOM05D004745 ORTHO05D005626 3.1e-32 142.9 155 53.5
Psat7g255920 Pisum sativum HOM05D004745 ORTHO05D005626 5.3e-32 142.1 153 54.9
Ca_20430_v3 Cicer arietinum L. HOM05D004745 ORTHO05D005626 9.0e-32 141.4 91 75.8
Eucgr.F02539 Eucalyptus grandis HOM05D004745 ORTHO05D005626 9.0e-32 141.4 114 67.5
FAN09G2173 Fragaria x ananassa HOM05D004745 ORTHO05D005626 1.2e-31 141.0 112 67.0
vmacro18973 Vaccinium macrocarpon HOM05D004745 ORTHO05D005626 1.2e-31 141.0 164 50.0
CAN.G1158.5 Capsicum annuum HOM05D004745 ORTHO05D005626 1.5e-31 140.6 172 48.3
AUR62011549 Chenopodium quinoa HOM05D004745 ORTHO05D005626 1.5e-31 140.6 179 48.6
AUR62016368 Chenopodium quinoa HOM05D004745 ORTHO05D005626 1.5e-31 140.6 153 54.2
Ca_29515_v3 Cicer arietinum L. HOM05D004745 ORTHO05D005626 2.0e-31 140.2 151 57.0
Cc04_g04150 Coffea canephora HOM05D004745 ORTHO05D005626 2.0e-31 140.2 191 45.5
Lj3g0003662 Lotus japonicus HOM05D004745 ORTHO05D005626 2.0e-31 140.2 156 55.8
Sc06g0004020 Simmondsia chinensis HOM05D004745 ORTHO05D005626 2.0e-31 140.2 150 54.0
Migut.I00794 Erythranthe guttata HOM05D004745 ORTHO05D005626 2.6e-31 139.8 163 50.3
CSS0020299 Camellia sinensis var. sinensis HOM05D004745 ORTHO05D005626 3.4e-31 139.4 121 63.6
Peaxi162Scf00320g00617 Petunia axillaris HOM05D004745 ORTHO05D005626 3.4e-31 139.4 114 64.0
EL10Ac9g21930 Beta vulgaris HOM05D004745 ORTHO05D005626 4.5e-31 139.0 158 50.0
ClCG07G012760 Citrullus lanatus HOM05D004745 ORTHO05D005626 4.5e-31 139.0 112 65.2
PGSC0003DMG400029962 Solanum tuberosum HOM05D004745 ORTHO05D005626 4.5e-31 139.0 171 48.5
Actinidia15789 Actinidia chinensis HOM05D004745 ORTHO05D005626 7.6e-31 138.3 126 58.7
Sed0026286 Sechium edule HOM05D004745 ORTHO05D005626 7.6e-31 138.3 118 61.0
Aqoxy7G02119 Aquilegia oxysepala HOM05D004745 ORTHO05D005626 1.0e-30 137.9 112 62.5
Haze_16523 Corylus avellana HOM05D004745 ORTHO05D005626 1.0e-30 137.9 112 64.3
Gohir.A10G075700 Gossypium hirsutum HOM05D004745 ORTHO05D005626 1.0e-30 137.9 121 63.6
Sp1g13740 Schrenkiella parvula HOM05D004745 ORTHO05D005626 1.0e-30 137.9 117 62.4
CANSAT56G2452 Cannabis sativa HOM05D004745 ORTHO05D005626 1.3e-30 137.5 112 66.1
FAN02G3524 Fragaria x ananassa HOM05D004745 ORTHO05D005626 1.3e-30 137.5 112 67.9
Medtr4g011040 Medicago truncatula HOM05D004745 ORTHO05D005626 1.3e-30 137.5 91 73.6
Cfa001995 Carpinus fangiana HOM05D004745 ORTHO05D005626 1.7e-30 137.1 112 63.4
Gohir.D10G075900 Gossypium hirsutum HOM05D004745 ORTHO05D005626 1.7e-30 137.1 146 56.8
Nitab4.5_0000413g0130 Nicotiana tabacum HOM05D004745 ORTHO05D005626 1.7e-30 137.1 153 50.3
Nitab4.5_0009683g0020 Nicotiana tabacum HOM05D004745 ORTHO05D005626 1.7e-30 137.1 153 49.7
PSO170G2068 Papaver somniferum HOM05D004745 ORTHO05D005626 2.2e-30 136.7 112 62.5
Potri.001G171800 Populus trichocarpa HOM05D004745 ORTHO05D005626 2.2e-30 136.7 112 66.1
RcHm_v2.0_Chr2g0136431 Rosa chinensis HOM05D004745 ORTHO05D005626 2.2e-30 136.7 112 64.3
CsaV3_4G001440 Cucumis sativus L. HOM05D004745 ORTHO05D005626 2.9e-30 136.3 150 54.7
FvH4_6g30190 Fragaria vesca HOM05D004745 ORTHO05D005626 2.9e-30 136.3 112 67.9
FAN14G5774 Fragaria x ananassa HOM05D004745 ORTHO05D005626 2.9e-30 136.3 112 67.9
PSO455G0289 Papaver somniferum HOM05D004745 ORTHO05D005626 2.9e-30 136.3 131 56.5
unitig_747.g21294 Utricularia gibba HOM05D004745 ORTHO05D005626 2.9e-30 136.3 192 44.3
HanXRQChr10g0303121 Helianthus annuus HOM05D004745 ORTHO05D005626 3.8e-30 136.0 153 49.7
SGA_v2.0_scaffold5G02669 Striga asiatica HOM05D004745 ORTHO05D005626 3.8e-30 136.0 148 54.7
Gorai.011G081700 Gossypium raimondii HOM05D004745 ORTHO05D005626 4.9e-30 135.6 146 56.2
THA.LOC104808227 Tarenaya hassleriana HOM05D004745 ORTHO05D005626 4.9e-30 135.6 112 64.3
Aa31LG7G150 Aethionema arabicum HOM05D004745 ORTHO05D005626 8.4e-30 134.8 151 54.3
Lalb_Chr14g0373711 Lupinus albus HOM05D004745 ORTHO05D005626 8.4e-30 134.8 88 70.5
Thhalv10008467m.g Eutrema salsugineum HOM05D004745 ORTHO05D005626 1.4e-29 134.0 109 64.2
ECA238G2546 Erigeron canadensis HOM05D004745 ORTHO05D005626 1.9e-29 133.7 109 64.2
Nn8g39406 Nelumbo nucifera HOM05D004745 ORTHO05D005626 1.9e-29 133.7 121 57.0
AT1G15390 Arabidopsis thaliana HOM05D004745 ORTHO05D005626 2.5e-29 133.3 118 59.3
MSTRG.22729 Avicennia marina HOM05D004745 ORTHO05D005626 2.5e-29 133.3 151 53.0
Ciclev10026288m.g Citrus clementina HOM05D004745 ORTHO05D005626 2.5e-29 133.3 148 54.7
Thecc.06G070400 Theobroma cacao HOM05D004745 ORTHO05D005626 2.5e-29 133.3 146 55.5
C05p13550 Brassica napus HOM05D004745 ORTHO05D005626 3.2e-29 132.9 139 56.8
Carub.0001s1517 Capsella rubella HOM05D004745 ORTHO05D005626 3.2e-29 132.9 109 65.1
Lsat_1_v5_gn_5_132160 Lactuca sativa HOM05D004745 ORTHO05D005626 3.2e-29 132.9 133 56.4
BcaC05g25486 Brassica carinata HOM05D004745 ORTHO05D005626 4.2e-29 132.5 139 56.1
BolC5t30092H Brassica oleracea HOM05D004745 ORTHO05D005626 4.2e-29 132.5 170 52.4
CiPaw.01G245300 Carya illinoinensis HOM05D004745 ORTHO05D005626 4.2e-29 132.5 109 65.1
COL.COLO4_12918 Corchorus olitorius HOM05D004745 ORTHO05D005626 5.5e-29 132.1 150 54.0
C08p44990 Brassica napus HOM05D004745 ORTHO05D005626 7.1e-29 131.7 109 64.2
CARHR015930 Cardamine hirsuta HOM05D004745 ORTHO05D005626 7.1e-29 131.7 118 59.3
Hma1.2p1_0394F.1_g143470 Hydrangea macrophylla HOM05D004745 ORTHO05D005626 7.1e-29 131.7 121 60.3
AL1G27500 Arabidopsis lyrata HOM05D004745 ORTHO05D005626 9.3e-29 131.3 118 59.3
QL05p028225 Quercus lobata HOM05D004745 ORTHO05D005626 9.3e-29 131.3 109 63.3
Sabra01G0139800 Salix brachista HOM05D004745 ORTHO05D005626 9.3e-29 131.3 133 57.1
TAR636G0831 Trochodendron aralioides HOM05D004745 ORTHO05D005626 9.3e-29 131.3 121 57.9
Atru.chr1.3054 Acer truncatum HOM05D004745 ORTHO05D005626 1.6e-28 130.6 136 55.9
BcaC05g25480 Brassica carinata HOM05D004745 ORTHO05D005626 1.6e-28 130.6 161 50.3
DCAR_025491 Daucus carota HOM05D004745 ORTHO05D005626 2.1e-28 130.2 112 60.7
Duzib235G0601 Durio zibethinus HOM05D004745 ORTHO05D005626 2.1e-28 130.2 154 52.6
ECA238G4104 Erigeron canadensis HOM05D004745 ORTHO05D005626 2.1e-28 130.2 152 46.7
HPP92_024132 Vanilla planifolia HOM05D004745 ORTHO05D005626 2.1e-28 130.2 118 61.9
ATR1156G012 Amborella trichopoda HOM05D004745 ORTHO05D005626 2.7e-28 129.8 159 46.5
BraA06t24321Z Brassica rapa HOM05D004745 ORTHO05D005626 2.7e-28 129.8 163 49.7
A06p11430 Brassica napus HOM05D004745 ORTHO05D005626 3.5e-28 129.4 163 49.7
BolC8t52045H Brassica oleracea HOM05D004745 ORTHO05D005626 3.5e-28 129.4 154 53.2
Lj9A502G38 Lonicera japonica HOM05D004745 ORTHO05D005626 3.5e-28 129.4 117 59.0
Psat5g301200 Pisum sativum HOM05D004745 ORTHO05D005626 3.5e-28 129.4 88 68.2
Solyc07g015860.3 Solanum lycopersicum HOM05D004745 ORTHO05D005626 3.5e-28 129.4 155 49.7
ECA232G3489 Erigeron canadensis HOM05D004745 ORTHO05D005626 4.6e-28 129.0 152 46.1
ECA233G1751 Erigeron canadensis HOM05D004745 ORTHO05D005626 4.6e-28 129.0 152 46.1
MBI04_g07638_MAGBIO Magnolia biondii HOM05D004745 ORTHO05D005626 4.6e-28 129.0 153 49.0
BcaB03g14542 Brassica carinata HOM05D004745 ORTHO05D005626 6.0e-28 128.6 154 53.2
GSVIVG01017280001 Vitis vinifera HOM05D004745 ORTHO05D005626 6.0e-28 128.6 112 62.5
BcaC07g41503 Brassica carinata HOM05D004745 ORTHO05D005626 7.9e-28 128.3 154 52.6
Manes.11G053800 Manihot esculenta HOM05D004745 ORTHO05D005626 7.9e-28 128.3 112 63.4
Lsat_1_v5_gn_4_105820 Lactuca sativa HOM05D004745 ORTHO05D005626 1.0e-27 127.9 141 49.6
TWI12G1169 Tripterygium wilfordii HOM05D004745 ORTHO05D005626 1.0e-27 127.9 121 57.0
ECA240G0712 Erigeron canadensis HOM05D004745 ORTHO05D005626 1.3e-27 127.5 134 50.0
Ca_01071_v3 Cicer arietinum L. HOM05D004745 ORTHO05D005626 1.8e-27 127.1 98 64.3
ECA234G2450 Erigeron canadensis HOM05D004745 ORTHO05D005626 1.8e-27 127.1 165 44.2
A09p61430 Brassica napus HOM05D004745 ORTHO05D005626 2.3e-27 126.7 154 52.6
BraA09t41514Z Brassica rapa HOM05D004745 ORTHO05D005626 2.3e-27 126.7 154 52.6
ECA234G1027 Erigeron canadensis HOM05D004745 ORTHO05D005626 6.7e-27 125.2 111 55.0
TPR.G37193 Trifolium pratense HOM05D004745 ORTHO05D005626 6.7e-27 125.2 138 49.3
SalBow2G2198 Salvia bowleyana HOM05D004745 ORTHO05D005626 8.7e-27 124.8 149 51.7
arahy.Tifrunner.gnm1.ann1.1TA14L Arachis hypogaea HOM05D004745 ORTHO05D005626 1.1e-26 124.4 118 56.8
arahy.Tifrunner.gnm1.ann1.8B3Q96 Arachis hypogaea HOM05D004745 ORTHO05D005626 1.1e-26 124.4 118 56.8
ECA238G0294 Erigeron canadensis HOM05D004745 ORTHO05D005626 2.5e-26 123.2 158 44.9
VMungo1080G0321 Vigna mungo HOM05D004745 ORTHO05D005626 5.7e-26 122.1 131 51.9
Medtr2g103430 Medicago truncatula HOM05D004745 ORTHO05D005626 7.4e-26 121.7 88 64.8
ECA246G2906 Erigeron canadensis HOM05D004745 ORTHO05D005626 2.2e-25 120.2 128 51.6
MD17G1207300 Malus domestica HOM05D004745 ORTHO05D005626 2.2e-25 120.2 114 58.8
Lj3g0018837 Lotus japonicus HOM05D004745 ORTHO05D005626 2.8e-25 119.8 122 54.9
Sopen07g005700 Solanum pennellii HOM05D004745 ORTHO05D005626 4.8e-25 119.0 182 43.4
Pp3c1_9250 Physcomitrium patens HOM05D004745 ORTHO05D005626 2.4e-24 116.7 159 44.7
HanXRQChr16g0500481 Helianthus annuus HOM05D004745 ORTHO05D005626 4.1e-24 115.9 136 49.3
Phvul.005G175900 Phaseolus vulgaris HOM05D004745 ORTHO05D005626 1.3e-22 110.9 115 51.3
Pp3c2_27110 Physcomitrium patens HOM05D004745 ORTHO05D005626 1.7e-22 110.5 88 62.5
Glyma.15G009700 Glycine max HOM05D004745 ORTHO05D005626 2.2e-22 110.2 112 53.6
SMO229G0001 Selaginella moellendorffii HOM05D004745 ORTHO05D005626 6.5e-22 108.6 92 58.7
CBR_g8594 Chara braunii HOM05D004745 ORTHO05D005626 8.5e-22 108.2 131 46.6
MD13G1166000 Malus domestica HOM05D004745 ORTHO05D005626 1.9e-21 107.1 152 42.8
arahy.Tifrunner.gnm1.ann1.9IE0L2 Arachis hypogaea HOM05D004745 ORTHO05D005626 2.5e-21 106.7 84 60.7
arahy.Tifrunner.gnm1.ann1.W67IMC Arachis hypogaea HOM05D004745 ORTHO05D005626 2.5e-21 106.7 84 60.7
Mapoly0061s0037 Marchantia polymorpha HOM05D004745 ORTHO05D005626 5.5e-21 105.5 124 47.6
Mapoly0285s0003 Marchantia polymorpha HOM05D004745 ORTHO05D005626 5.5e-21 105.5 124 47.6
Medtr2g103420 Medicago truncatula HOM05D004745 ORTHO05D005626 4.3e-18 95.9 88 54.5
Actinidia01762 Actinidia chinensis HOM05D004745 ORTHO05D005626 7.4e-18 95.1 54 83.3
MD13G1165900 Malus domestica HOM05D004745 ORTHO05D005626 1.3e-17 94.4 82 61.0
Cpa.g.sc10.231 Carica papaya HOM05D004745 ORTHO05D005626 3.7e-17 92.8 54 81.5
MD17G1207400 Malus domestica HOM05D004745 ORTHO05D005626 1.4e-16 90.9 58 72.4
MELO3C017896.2 Cucumis melo HOM05D004745 ORTHO05D005626 3.1e-16 89.7 63 68.3
CSS0024051 Camellia sinensis var. sinensis HOM05D004745 ORTHO05D005626 4.1e-16 89.4 96 54.2
Lj9C59T9 Lonicera japonica HOM05D004745 ORTHO05D005626 1.0e-14 84.7 58 65.5
Lj9A53G21 Lonicera japonica HOM05D004745 ORTHO05D005626 1.4e-13 80.9 59 62.7
TWI18G0786 Tripterygium wilfordii HOM05D004745 ORTHO05D005626 2.5e-13 80.1 117 41.9
Dinv30579 Davidia involucrata HOM05D004745 ORTHO05D005626 9.4e-13 78.2 84 48.8
Aqoxy7G02118 Aquilegia oxysepala HOM05D004745 ORTHO05D005626 1.2e-12 77.8 102 41.2
MCO13G487 Micromonas commoda HOM05D004745 ORTHO05D005626 1.2e-12 77.8 81 50.6
Cre03.g172100 Chlamydomonas reinhardtii HOM05D004745 ORTHO05D005626 2.1e-12 77.0 91 48.4
CDE04G3151 Ceratophyllum demersum HOM05D004745 ORTHO05D005626 6.1e-12 75.5 61 62.3
BcaC01g05769 Brassica carinata HOM05D004745 ORTHO05D005626 4.5e-07 59.3 59 59.3
BolC9t52937H Brassica oleracea HOM05D005263 ORTHO05D006891 1.3e-06 57.8 89 41.6
PRCOL_00006240 Prasinoderma coloniale HOM05D004745 ORTHO05D005626 1.3e-06 57.8 81 40.7


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