Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 3.6e-77 291.6 154 100.0
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 1.9e-49 199.5 143 76.2
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 8.9e-36 154.1 119 67.2
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 3.4e-35 152.1 118 70.3
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 3.7e-34 148.7 110 67.3
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 8.4e-34 147.5 129 62.0
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 8.4e-34 147.5 126 65.9
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 1.1e-33 147.1 120 65.8
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 1.9e-33 146.4 122 64.8
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 3.2e-33 145.6 122 66.4
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 3.2e-33 145.6 121 64.5
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 4.1e-33 145.2 121 65.3
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 5.4e-33 144.8 119 65.5
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 7.1e-33 144.4 121 67.8
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 2.7e-32 142.5 120 64.2
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 3.5e-32 142.1 161 55.3
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 3.5e-32 142.1 123 65.0
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 3.5e-32 142.1 123 65.0
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 4.6e-32 141.7 130 58.5
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.3e-31 140.2 123 64.2
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 1.3e-31 140.2 117 62.4
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 1.3e-31 140.2 127 60.6
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 3.0e-31 139.0 111 64.9
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 3.9e-31 138.7 110 63.6
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 5.1e-31 138.3 120 60.0
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 1.5e-30 136.7 125 59.2
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 2.5e-30 136.0 111 60.4
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 3.3e-30 135.6 111 64.0
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 4.3e-30 135.2 110 61.8
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 5.6e-30 134.8 132 55.3
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 7.3e-30 134.4 189 44.4
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 9.6e-30 134.0 110 60.9
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 1.6e-29 133.3 110 63.6
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 3.6e-29 132.1 110 60.0
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 6.2e-29 131.3 110 60.0
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 6.2e-29 131.3 110 60.0
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 6.2e-29 131.3 110 60.0
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 8.1e-29 131.0 110 61.8
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 8.1e-29 131.0 115 62.6
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 1.4e-28 130.2 110 59.1
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 1.4e-28 130.2 110 60.9
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 1.8e-28 129.8 110 60.0
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 2.4e-28 129.4 121 54.5
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 5.2e-28 128.3 107 61.7
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 8.9e-28 127.5 108 61.1
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 1.5e-27 126.7 130 53.8
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 7.6e-27 124.4 111 62.2
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.3e-26 123.6 129 58.1
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.4e-25 120.2 115 57.4
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.4e-25 120.2 115 57.4
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.4e-25 120.2 115 57.4
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.4e-25 120.2 115 57.4
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 1.4e-25 120.2 90 70.0
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.4e-25 119.4 115 56.5
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.2e-25 119.0 107 59.8
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 9.3e-25 117.5 86 70.9
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 4.6e-24 115.2 116 56.0
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 7.8e-24 114.4 115 54.8
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 1.3e-21 107.1 212 35.8
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 1.4e-20 103.6 75 66.7
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 1.8e-20 103.2 111 48.6
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 1.8e-20 103.2 111 48.6
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 1.2e-19 100.5 158 43.0
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 5.8e-19 98.2 81 65.4
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 9.9e-19 97.4 115 51.3
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.7e-18 96.7 115 51.3
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 2.5e-14 82.8 66 63.6
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-12 76.6 107 39.3
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 1.8e-12 76.6 57 66.7
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 1.0e-07 60.8 65 52.3
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 1.8e-07 60.1 54 59.3
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 4.3e-06 55.5 99 41.4


User provided reference genes

Program Settings