Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb066050 Zea mays HOM05D004561 ORTHO05D005315 3.6e-168 594.7 284 100.0
Zm00001eb433850 Zea mays HOM05D004561 ORTHO05D005315 1.1e-100 370.5 189 90.5
Os04g0678800 Oryza sativa ssp. japonica HOM05D004561 ORTHO05D005315 4.1e-79 298.9 189 72.0
PSO210G6857 Papaver somniferum HOM05D004561 ORTHO05D005315 6.4e-56 221.9 185 56.8
CiPaw.15G149700 Carya illinoinensis HOM05D004561 ORTHO05D005315 8.4e-56 221.5 185 54.1
HPP92_027560 Vanilla planifolia HOM05D004561 ORTHO05D005315 8.4e-56 221.5 188 53.7
Prupe.5G069900 Prunus persica HOM05D004561 ORTHO05D005315 3.2e-55 219.5 187 55.1
Aqoxy6G01699 Aquilegia oxysepala HOM05D004561 ORTHO05D005315 9.3e-55 218.0 185 54.6
TAR628G1415 Trochodendron aralioides HOM05D004561 ORTHO05D005315 9.3e-55 218.0 189 54.5
Potri.012G041700 Populus trichocarpa HOM05D004561 ORTHO05D005315 1.2e-54 217.6 186 56.5
Sabra12G0028700 Salix brachista HOM05D004561 ORTHO05D005315 1.0e-53 214.5 186 55.4
QL09p040874 Quercus lobata HOM05D004561 ORTHO05D005315 2.3e-53 213.4 185 54.6
Eucgr.B03172 Eucalyptus grandis HOM05D004561 ORTHO05D005315 2.5e-52 209.9 187 52.4
Gohir.D04G023500 Gossypium hirsutum HOM05D004561 ORTHO05D005315 3.3e-52 209.5 192 54.7
Gorai.012G033300 Gossypium raimondii HOM05D004561 ORTHO05D005315 3.3e-52 209.5 192 54.7
Nn5g27375 Nelumbo nucifera HOM05D004561 ORTHO05D005315 9.6e-52 208.0 185 49.7
Glyma.08G081300 Glycine max HOM05D004561 ORTHO05D005315 1.3e-51 207.6 189 51.9
Medtr4g094538 Medicago truncatula HOM05D004561 ORTHO05D005315 1.3e-51 207.6 184 51.1
Psat1g047920 Pisum sativum HOM05D004561 ORTHO05D005315 2.1e-51 206.8 185 52.4
TPR.G30372 Trifolium pratense HOM05D004561 ORTHO05D005315 2.1e-51 206.8 185 51.9
CsaV3_1G002780 Cucumis sativus L. HOM05D004561 ORTHO05D005315 3.6e-51 206.1 185 52.4
Sed0015683 Sechium edule HOM05D004561 ORTHO05D005315 3.6e-51 206.1 189 52.4
COL.COLO4_13996 Corchorus olitorius HOM05D004561 ORTHO05D005315 6.2e-51 205.3 189 51.9
MELO3C017214.2 Cucumis melo HOM05D004561 ORTHO05D005315 6.2e-51 205.3 185 53.0
Gohir.A05G386400 Gossypium hirsutum HOM05D004561 ORTHO05D005315 6.2e-51 205.3 192 53.6
Thecc.01G124300 Theobroma cacao HOM05D004561 ORTHO05D005315 6.2e-51 205.3 189 50.8
Lj4g0004659 Lotus japonicus HOM05D004561 ORTHO05D005315 1.1e-50 204.5 177 54.2
ClCG06G015750 Citrullus lanatus HOM05D000113 ORTHO05D002571 1.4e-50 204.1 186 52.7
Glyma.05G126500 Glycine max HOM05D004561 ORTHO05D005315 4.0e-50 202.6 196 50.0
HanXRQChr15g0480201 Helianthus annuus HOM05D004561 ORTHO05D005315 4.0e-50 202.6 185 52.4
CDE04G2633 Ceratophyllum demersum HOM05D004561 ORTHO05D005315 6.9e-50 201.8 141 61.0
A07p23920 Brassica napus HOM05D004561 ORTHO05D005315 9.0e-50 201.4 186 46.8
Hma1.2p1_0018F.1_g012650 Hydrangea macrophylla HOM05D004561 ORTHO05D005315 9.0e-50 201.4 186 50.5
Lj6g0005186 Lotus japonicus HOM05D004561 ORTHO05D005315 9.0e-50 201.4 185 51.4
TWI15G0666 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 9.0e-50 201.4 186 50.0
Sc18g0002470 Simmondsia chinensis HOM05D004561 ORTHO05D005315 1.2e-49 201.1 191 50.3
BolC6t37673H Brassica oleracea HOM05D004561 ORTHO05D005315 2.0e-49 200.3 185 47.6
BraA07t30043Z Brassica rapa HOM05D004561 ORTHO05D005315 2.6e-49 199.9 185 47.6
Lalb_Chr12g0208781 Lupinus albus HOM05D004561 ORTHO05D005315 2.6e-49 199.9 185 49.7
SGA_v2.0_scaffold37G14646 Striga asiatica HOM05D004561 ORTHO05D005315 2.6e-49 199.9 185 50.3
Thhalv10002077m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 3.4e-49 199.5 188 49.5
FAN13G2292 Fragaria x ananassa HOM05D004561 ORTHO05D005315 3.4e-49 199.5 133 66.2
FAN18G3337 Fragaria x ananassa HOM05D004561 ORTHO05D005315 3.4e-49 199.5 133 66.2
GSVIVG01028605001 Vitis vinifera HOM05D004561 ORTHO05D005315 3.4e-49 199.5 186 51.6
CARHR168490 Cardamine hirsuta HOM05D004561 ORTHO05D005315 4.5e-49 199.1 188 49.5
AUR62010959 Chenopodium quinoa HOM05D004561 ORTHO05D005315 4.5e-49 199.1 189 51.9
Solyc11g017400.2 Solanum lycopersicum HOM05D004561 ORTHO05D005315 4.5e-49 199.1 187 51.9
VMungo0251G0557 Vigna mungo HOM05D004561 ORTHO05D005315 4.5e-49 199.1 143 59.4
Ciclev10002226m.g Citrus clementina HOM05D004561 ORTHO05D005315 7.6e-49 198.4 185 50.8
Manes.08G062966 Manihot esculenta HOM05D004561 ORTHO05D005315 7.6e-49 198.4 186 52.2
PSO761G0502 Papaver somniferum HOM05D004561 ORTHO05D005315 7.6e-49 198.4 172 54.7
AL5G39820 Arabidopsis lyrata HOM05D004561 ORTHO05D005315 1.7e-48 197.2 188 49.5
MD16G1270300 Malus domestica HOM05D004561 ORTHO05D005315 1.7e-48 197.2 146 60.3
Dinv14864 Davidia involucrata HOM05D004561 ORTHO05D005315 2.2e-48 196.8 186 51.6
PGSC0003DMG403029595 Solanum tuberosum HOM05D004561 ORTHO05D005315 2.2e-48 196.8 187 51.9
TWI81G0190 Tripterygium wilfordii HOM05D004561 ORTHO05D005315 2.2e-48 196.8 188 49.5
Nitab4.5_0000422g0080 Nicotiana tabacum HOM05D004561 ORTHO05D005315 2.9e-48 196.4 187 52.4
MSTRG.11225 Avicennia marina HOM05D004561 ORTHO05D005315 3.8e-48 196.1 187 52.4
PGSC0003DMG400009224 Solanum tuberosum HOM05D004561 ORTHO05D005315 3.8e-48 196.1 187 51.9
Sp5g04590 Schrenkiella parvula HOM05D004561 ORTHO05D005315 4.9e-48 195.7 185 47.6
Hund26218 Selenicereus undatus HOM05D004561 ORTHO05D005315 4.9e-48 195.7 143 59.4
THA.LOC104822320 Tarenaya hassleriana HOM05D004561 ORTHO05D005315 4.9e-48 195.7 187 49.7
Peaxi162Scf00310g00711 Petunia axillaris HOM05D004561 ORTHO05D005315 8.4e-48 194.9 185 52.4
Thhalv10002036m.g Eutrema salsugineum HOM05D004561 ORTHO05D005315 1.1e-47 194.5 193 47.2
EL10Ac8g18446 Beta vulgaris HOM05D004561 ORTHO05D005315 1.4e-47 194.1 186 50.0
BcaC08g44900 Brassica carinata HOM05D004561 ORTHO05D005315 1.4e-47 194.1 141 58.2
CSS0045511 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 1.9e-47 193.7 185 50.3
Peaxi162Scf00152g00158 Petunia axillaris HOM05D004561 ORTHO05D005315 2.4e-47 193.4 188 51.1
Cc03_g07430 Coffea canephora HOM05D004561 ORTHO05D005315 3.2e-47 193.0 188 51.6
FAN04G2378 Fragaria x ananassa HOM05D004561 ORTHO05D005315 4.2e-47 192.6 187 50.3
FAN08G3218 Fragaria x ananassa HOM05D004561 ORTHO05D005315 4.2e-47 192.6 187 50.3
Atru.chr13.142 Acer truncatum HOM05D004561 ORTHO05D005315 5.5e-47 192.2 186 50.5
BcaB02g07548 Brassica carinata HOM05D004561 ORTHO05D005315 5.5e-47 192.2 204 44.6
AUR62007426 Chenopodium quinoa HOM05D004561 ORTHO05D005315 5.5e-47 192.2 189 50.3
Solyc08g074360.3 Solanum lycopersicum HOM05D004561 ORTHO05D005315 7.1e-47 191.8 187 50.8
Lsat_1_v5_gn_7_30581 Lactuca sativa HOM05D004561 ORTHO05D005315 1.2e-46 191.0 188 49.5
AT3G58130 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 2.7e-46 189.9 186 47.8
AUR62021469 Chenopodium quinoa HOM05D004561 ORTHO05D005315 3.5e-46 189.5 153 58.2
FvH4_7g18930 Fragaria vesca HOM05D004561 ORTHO05D005315 4.6e-46 189.1 187 49.7
FAN06G2746 Fragaria x ananassa HOM05D004561 ORTHO05D005315 4.6e-46 189.1 187 49.7
FAN06G3856 Fragaria x ananassa HOM05D004561 ORTHO05D005315 4.6e-46 189.1 187 49.7
Sopen08g023020 Solanum pennellii HOM05D004561 ORTHO05D005315 4.6e-46 189.1 187 49.7
Migut.I00621 Erythranthe guttata HOM05D004561 ORTHO05D005315 7.9e-46 188.3 189 48.1
CAN.G370.25 Capsicum annuum HOM05D004561 ORTHO05D005315 1.0e-45 188.0 186 50.0
MSTRG.22847 Avicennia marina HOM05D004561 ORTHO05D005315 1.3e-45 187.6 186 51.1
Carub.0005s2498 Capsella rubella HOM05D004561 ORTHO05D005315 2.3e-45 186.8 185 45.9
AT2G27340 Arabidopsis thaliana HOM05D004561 ORTHO05D005315 5.1e-45 185.7 145 56.6
Rhsim06G0237000 Rhododendron simsii HOM05D004561 ORTHO05D005315 5.1e-45 185.7 221 43.0
FvH4_5g18940 Fragaria vesca HOM05D004561 ORTHO05D005315 8.7e-45 184.9 187 48.1
CAN.G1530.1 Capsicum annuum HOM05D004561 ORTHO05D005315 1.9e-44 183.7 186 48.9
RcHm_v2.0_Chr7g0203331 Rosa chinensis HOM05D004561 ORTHO05D005315 2.5e-44 183.3 187 48.7
Lj1A1185G61 Lonicera japonica HOM05D004561 ORTHO05D005315 7.4e-44 181.8 223 42.2
ECA233G0879 Erigeron canadensis HOM05D004561 ORTHO05D005315 9.6e-44 181.4 146 56.8
C06p25150 Brassica napus HOM05D004561 ORTHO05D005315 1.6e-43 180.6 227 39.2
SalBow3G1851 Salvia bowleyana HOM05D004561 ORTHO05D005315 6.2e-43 178.7 206 44.2
arahy.Tifrunner.gnm1.ann1.3X42ZC Arachis hypogaea HOM05D004561 ORTHO05D005315 8.1e-43 178.3 169 49.7
vmacro21453 Vaccinium macrocarpon HOM05D004561 ORTHO05D005315 4.0e-42 176.0 135 59.3
ATR0661G441 Amborella trichopoda HOM05D004561 ORTHO05D005315 5.3e-42 175.6 190 44.7
Oeu031248.3 Olea europaea HOM05D004561 ORTHO05D005315 2.0e-41 173.7 206 44.7
unitig_744.g24647 Utricularia gibba HOM05D004561 ORTHO05D005315 2.0e-41 173.7 201 44.3
Phvul.002G198500 Phaseolus vulgaris HOM05D004561 ORTHO05D005315 1.3e-40 171.0 126 58.7
SHI05351 Sapria himalayana HOM05D004561 ORTHO05D005315 1.3e-40 171.0 142 52.8
C08p33660 Brassica napus HOM05D004561 ORTHO05D005315 1.9e-39 167.2 185 43.8
DCAR_002722 Daucus carota HOM05D004561 ORTHO05D005315 1.3e-37 161.0 128 57.0
BcaC07g40276 Brassica carinata HOM05D004561 ORTHO05D005315 2.5e-36 156.8 146 50.0
vmacro18667 Vaccinium macrocarpon HOM05D004561 ORTHO05D005315 3.3e-36 156.4 248 37.9
BcaC07g40185 Brassica carinata HOM05D004561 ORTHO05D005315 4.3e-36 156.0 146 51.4
Haze_18936 Corylus avellana HOM05D004561 ORTHO05D005315 5.7e-36 155.6 169 48.5
BolC8t50963H Brassica oleracea HOM05D004561 ORTHO05D005315 1.4e-34 151.0 141 48.9
Mapoly0029s0047 Marchantia polymorpha HOM05D004561 ORTHO05D005315 2.4e-34 150.2 198 39.9
AagrBONN_evm.TU.Sc2ySwM_368.3407 Anthoceros agrestis HOM05D004561 ORTHO05D005315 9.0e-34 148.3 153 49.0
SalBow1G5912 Salvia bowleyana HOM05D004561 ORTHO05D005315 5.9e-33 145.6 126 54.0
FAN18G2677 Fragaria x ananassa HOM05D004561 ORTHO05D005315 1.3e-32 144.4 103 62.1
Nitab4.5_0000560g0110 Nicotiana tabacum HOM05D004561 ORTHO05D005315 1.3e-32 144.4 154 47.4
CiPaw.16G098200 Carya illinoinensis HOM05D004561 ORTHO05D005315 3.8e-32 142.9 151 45.7
Pp3c13_19470 Physcomitrium patens HOM05D004561 ORTHO05D005315 3.2e-31 139.8 138 50.0
Sopen11g009350 Solanum pennellii HOM05D004561 ORTHO05D005315 1.0e-29 134.8 106 55.7
RcHm_v2.0_Chr7g0203411 Rosa chinensis HOM05D004561 ORTHO05D005315 1.8e-29 134.0 146 47.9
Sopen08g022960 Solanum pennellii HOM05D004561 ORTHO05D005315 3.0e-29 133.3 136 51.5
arahy.Tifrunner.gnm1.ann1.AX2CN5 Arachis hypogaea HOM05D004561 ORTHO05D005315 5.1e-29 132.5 155 43.9
Hund26251 Selenicereus undatus HOM05D004561 ORTHO05D005315 5.7e-28 129.0 112 53.6
Aa31LG10G12840 Aethionema arabicum HOM05D004561 ORTHO05D005315 7.4e-28 128.6 225 33.8
CBR_g12600 Chara braunii HOM05D005240 ORTHO05D006471 1.6e-27 127.5 194 40.2
Carub.0008s0419 Capsella rubella HOM05D004561 ORTHO05D005315 3.7e-27 126.3 130 46.9
Cre06.g300100 Chlamydomonas reinhardtii HOM05D004561 ORTHO05D005315 6.3e-27 125.6 168 41.7
Hund02231 Selenicereus undatus HOM05D004561 ORTHO05D005315 6.3e-27 125.6 144 44.4
A09p50910 Brassica napus HOM05D004561 ORTHO05D005315 7.7e-25 118.6 147 39.5
MCO09G807 Micromonas commoda HOM05D004561 ORTHO05D005315 5.0e-24 115.9 124 46.8
AUR62002652 Chenopodium quinoa HOM05D004561 ORTHO05D005315 7.2e-23 112.1 175 37.7
CSS0036958 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 9.4e-23 111.7 93 55.9
CSS0005948 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 6.1e-22 109.0 93 54.8
CSS0005045 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 7.9e-22 108.6 93 54.8
CSS0006634 Camellia sinensis var. sinensis HOM05D004561 ORTHO05D005315 7.9e-22 108.6 93 53.8
PRCOL_00001899 Prasinoderma coloniale HOM05D004561 ORTHO05D005315 8.2e-19 98.6 125 42.4
Carub.0339s0001 Capsella rubella HOM05D004561 ORTHO05D005315 2.7e-14 83.6 67 53.7
SalBow1G4039 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.4e-13 81.3 66 50.0
Cpa.g.sc437.1 Carica papaya HOM05D004561 ORTHO05D005315 1.8e-13 80.9 68 54.4
SalBow1G5331 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.8e-13 80.9 66 51.5
SalBow1G2796 Salvia bowleyana HOM05D004561 ORTHO05D005315 2.6e-12 77.0 66 47.0
SalBow1G7315 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.3e-11 74.7 85 42.4
Cpa.g.c32558.1 Carica papaya HOM05D004561 ORTHO05D005315 1.1e-10 71.6 52 53.8
ECA236G3170 Erigeron canadensis HOM05D004561 ORTHO05D005315 1.1e-10 71.6 67 46.3
SalBow1G6765 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.6e-09 67.8 83 39.8
SHI05337 Sapria himalayana HOM05D004561 ORTHO05D005315 2.6e-09 67.0 45 64.4
RcHm_v2.0_Chr7g0204241 Rosa chinensis HOM05D004561 ORTHO05D005315 3.5e-09 66.6 83 41.0
MD06G1059000 Malus domestica HOM05D004561 ORTHO05D005315 1.0e-08 65.1 40 65.0
SalBow1G4445 Salvia bowleyana HOM05D025598 ORTHO05D005315 1.3e-08 64.7 43 62.8
FvH4_5g18980 Fragaria vesca HOM05D004561 ORTHO05D005315 5.0e-08 62.8 48 54.2
RcHm_v2.0_Chr7g0204201 Rosa chinensis HOM05D004561 ORTHO05D005315 4.7e-06 56.2 83 37.3
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 4.7e-06 56.2 59 40.7
Pp3s34_410 Physcomitrium patens HOM05D004561 ORTHO05D311300 6.1e-06 55.8 128 28.1


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