Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb016390 Zea mays HOM05D003565 ORTHO05D003943 7.7e-79 297.4 182 100.0
Zm00001eb016410 Zea mays HOM05D003565 ORTHO05D003943 2.3e-22 109.8 150 48.0
Os03g0342100 Oryza sativa ssp. japonica HOM05D003565 ORTHO05D003943 3.9e-22 109.0 137 48.2
Os03g0341600 Oryza sativa ssp. japonica HOM05D003565 ORTHO05D003943 2.1e-20 103.2 135 45.9
Os07g0674400 Oryza sativa ssp. japonica HOM05D003565 ORTHO05D003943 1.3e-09 67.4 120 41.7
HanXRQChr03g0089401 Helianthus annuus HOM05D003565 ORTHO05D003943 8.4e-09 64.7 157 36.3
PGSC0003DMG400011334 Solanum tuberosum HOM05D003565 ORTHO05D003943 1.9e-08 63.5 141 37.6
Os07g0674500 Oryza sativa ssp. japonica HOM05D003565 ORTHO05D003943 3.2e-08 62.8 142 37.3
Lsat_1_v5_gn_6_95321 Lactuca sativa HOM05D003565 ORTHO05D003943 1.2e-07 60.8 144 35.4
Sopen01g028300 Solanum pennellii HOM05D003565 ORTHO05D003943 1.2e-07 60.8 141 37.6
QL06p009664 Quercus lobata HOM05D003565 ORTHO05D003943 1.6e-07 60.5 135 37.0
Solyc01g066680.3 Solanum lycopersicum HOM05D003565 ORTHO05D003943 1.6e-07 60.5 143 37.1
HanXRQChr08g0214541 Helianthus annuus HOM05D003565 ORTHO05D003943 2.7e-07 59.7 140 35.7
Zm00001eb111390 Zea mays HOM05D003565 ORTHO05D003943 2.7e-07 59.7 91 40.7
Gohir.A10G165200 Gossypium hirsutum HOM05D003565 ORTHO05D003943 3.5e-07 59.3 142 37.3
Glyma.09G043500 Glycine max HOM05D003565 ORTHO05D003943 4.6e-07 58.9 101 38.6
HanXRQChr13g0420001 Helianthus annuus HOM05D003565 ORTHO05D003943 7.9e-07 58.2 142 38.7
ECA240G0767 Erigeron canadensis HOM05D003565 ORTHO05D003943 1.3e-06 57.4 144 38.2
Cpa.g.sc16.191 Carica papaya HOM05D003565 ORTHO05D003943 1.8e-06 57.0 102 40.2
QL06p009796 Quercus lobata HOM05D003565 ORTHO05D003943 1.8e-06 57.0 113 37.2
Rhsim02G0008000 Rhododendron simsii HOM05D003565 ORTHO05D003943 1.8e-06 57.0 122 38.5
SalBow2G2654 Salvia bowleyana HOM05D003565 ORTHO05D003943 2.3e-06 56.6 143 37.1
QL06p009790 Quercus lobata HOM05D003565 ORTHO05D003943 3.9e-06 55.8 133 34.6
HanXRQChr03g0089391 Helianthus annuus HOM05D003565 ORTHO05D003943 6.7e-06 55.1 130 36.9
Sed0026730 Sechium edule HOM05D003565 ORTHO05D003943 6.7e-06 55.1 100 40.0
vmacro15222 Vaccinium macrocarpon HOM05D003565 ORTHO05D003943 6.7e-06 55.1 149 36.2
QL06p009778 Quercus lobata HOM05D003565 ORTHO05D003943 8.7e-06 54.7 138 34.8
QL93p0060_0003 Quercus lobata HOM05D003565 ORTHO05D003943 8.7e-06 54.7 138 34.8
THA.LOC104820292 Tarenaya hassleriana HOM05D003565 ORTHO05D003943 8.7e-06 54.7 117 35.9


User provided reference genes

Program Settings