Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 1.6e-77 292.7 158 100.0
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.6e-43 179.9 117 82.1
Glyma.15G130200 Glycine max HOM05D005932 ORTHO05D006213 2.2e-42 176.0 162 67.3
Glyma.09G024200 Glycine max HOM05D005932 ORTHO05D006213 5.7e-38 161.4 161 61.5
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 3.0e-26 122.5 111 62.2
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 1.4e-20 103.6 153 46.4
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 5.4e-20 101.7 161 46.6
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 5.4e-20 101.7 159 46.5
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 7.0e-20 101.3 135 49.6
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.2e-19 100.5 156 46.8
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 3.5e-19 99.0 157 46.5
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 4.6e-19 98.6 150 42.0
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 1.0e-18 97.4 152 42.1
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 3.0e-18 95.9 156 43.6
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 4.3e-17 92.0 126 48.4
Lalb_Chr07g0185951 Lupinus albus HOM05D005932 ORTHO05D006213 4.3e-17 92.0 149 44.3
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 5.6e-17 91.7 133 46.6
TPR.G26337 Trifolium pratense HOM05D005932 ORTHO05D006213 1.6e-16 90.1 124 46.0
Ca_00842_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 2.8e-16 89.4 107 51.4
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 3.6e-16 89.0 132 45.5
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 6.2e-16 88.2 131 44.3
arahy.Tifrunner.gnm1.ann1.2W5S4G Arachis hypogaea HOM05D005932 ORTHO05D006213 1.1e-15 87.4 180 38.9
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 1.8e-15 86.7 130 44.6
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 4.0e-15 85.5 120 44.2
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 5.2e-15 85.1 120 44.2
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 6.8e-15 84.7 116 45.7
arahy.Tifrunner.gnm1.ann1.JX8F6E Arachis hypogaea HOM05D005932 ORTHO05D006213 1.2e-14 84.0 175 38.3
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 2.0e-14 83.2 117 46.2
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 3.4e-14 82.4 126 40.5
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 3.4e-14 82.4 117 46.2
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 5.8e-14 81.6 120 45.0
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 7.5e-14 81.3 121 45.5
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 7.5e-14 81.3 122 42.6
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 1.3e-13 80.5 121 44.6
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.7e-13 80.1 120 42.5
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 3.7e-13 79.0 99 47.5
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 4.9e-13 78.6 120 50.0
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 4.9e-13 78.6 131 41.2
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 6.4e-13 78.2 155 41.3
Lalb_Chr18g0057981 Lupinus albus HOM05D005932 ORTHO05D006213 8.3e-13 77.8 127 40.9
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 1.1e-12 77.4 102 48.0
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.4e-12 77.0 129 40.3
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 3.2e-12 75.9 107 45.8
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 3.2e-12 75.9 129 40.3
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 3.2e-12 75.9 128 42.2
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 4.1e-12 75.5 120 40.0
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 5.4e-12 75.1 121 39.7
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 7.1e-12 74.7 122 39.3
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 1.2e-11 73.9 147 38.8
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 2.1e-11 73.2 132 40.9
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.1e-11 73.2 130 40.0
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 3.5e-11 72.4 122 41.0
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 3.5e-11 72.4 110 42.7
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 4.6e-11 72.0 124 38.7
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.7e-10 70.1 117 42.7
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 3.0e-10 69.3 126 38.1
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 5.1e-10 68.6 112 38.4
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 5.1e-10 68.6 123 36.6
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 5.1e-10 68.6 124 33.9
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 1.1e-09 67.4 136 39.7
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.1e-09 67.4 129 38.8
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 1.1e-09 67.4 118 40.7
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 1.9e-09 66.6 115 37.4
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 1.9e-09 66.6 136 37.5
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 1.9e-09 66.6 129 35.7
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 2.5e-09 66.2 130 38.5
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 3.3e-09 65.9 108 41.7
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 3.3e-09 65.9 126 36.5
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 5.6e-09 65.1 138 35.5
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 1.2e-08 63.9 97 46.4
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 1.2e-08 63.9 129 34.9
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 1.2e-08 63.9 122 41.0
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 2.1e-08 63.2 126 37.3
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 2.1e-08 63.2 112 41.1
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 3.6e-08 62.4 126 36.5
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 4.7e-08 62.0 128 35.9
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 6.2e-08 61.6 129 35.7
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 6.2e-08 61.6 123 36.6
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 8.1e-08 61.2 117 40.2
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 8.1e-08 61.2 112 37.5
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 1.1e-07 60.8 120 38.3
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 1.4e-07 60.5 120 35.0
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 1.4e-07 60.5 123 38.2
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 1.4e-07 60.5 147 34.0
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 1.8e-07 60.1 114 42.1
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 2.3e-07 59.7 120 36.7
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 2.3e-07 59.7 99 40.4
MBI02_g25782_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 2.3e-07 59.7 100 42.0
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 2.3e-07 59.7 107 41.1
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 3.1e-07 59.3 126 33.3
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 5.2e-07 58.5 121 30.6
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 5.2e-07 58.5 121 30.6
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 5.2e-07 58.5 121 30.6
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 5.2e-07 58.5 97 47.4
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 5.2e-07 58.5 110 40.0
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 5.2e-07 58.5 134 35.1
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 6.8e-07 58.2 140 32.9
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 8.9e-07 57.8 121 35.5
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 8.9e-07 57.8 138 31.2
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.2e-06 57.4 140 34.3
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.0e-06 56.6 105 36.2
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 3.4e-06 55.8 138 34.8
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 3.4e-06 55.8 130 33.8
Aa31LG6G11760 Aethionema arabicum HOM05D012212 ORTHO05D006213 5.8e-06 55.1 136 35.3
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 5.8e-06 55.1 113 38.1
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 9.9e-06 54.3 119 34.5
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 9.9e-06 54.3 117 35.0
Sp1g26360 Schrenkiella parvula HOM05D012212 ORTHO05D006213 9.9e-06 54.3 128 36.7


User provided reference genes

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