Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 0.0e+00 1259.2 668 100.0
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 0.0e+00 1119.4 669 90.0
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 8.8e-306 1053.1 672 85.1
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 1.3e-301 1039.3 667 84.9
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 4.6e-270 934.5 671 75.7
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 3.6e-259 898.3 676 72.2
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 4.3e-252 874.8 676 72.6
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 7.3e-252 874.0 679 71.4
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 2.1e-251 872.5 676 73.7
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 1.8e-250 869.4 679 71.4
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 1.3e-248 863.2 673 72.8
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 2.5e-228 795.8 659 67.2
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 7.4e-228 794.3 665 66.9
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 1.6e-227 793.1 659 67.2
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 3.8e-224 781.9 675 66.8
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 1.3e-221 773.5 662 66.3
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 6.1e-214 748.0 663 61.2
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 1.0e-213 747.3 653 61.3
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 3.0e-213 745.7 664 61.9
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 1.3e-211 740.3 682 60.9
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 6.3e-211 738.0 669 62.8
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 9.1e-210 734.2 660 62.3
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 1.5e-209 733.4 663 62.3
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 4.5e-209 731.9 662 61.9
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 1.9e-207 726.5 666 60.4
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 9.4e-207 724.2 659 58.7
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 9.4e-207 724.2 664 59.8
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 1.6e-206 723.4 595 64.5
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 2.7e-206 722.6 662 62.1
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 1.4e-205 720.3 674 61.9
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 3.3e-204 715.7 597 63.1
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 1.3e-203 713.8 680 61.9
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 8.2e-203 711.1 628 61.1
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 2.9e-200 702.6 658 60.0
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 5.5e-199 698.4 616 63.5
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 9.4e-199 697.6 661 62.9
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 9.4e-199 697.6 647 58.7
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 1.2e-198 697.2 589 63.5
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 1.6e-198 696.8 658 62.0
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 2.7e-198 696.0 680 56.2
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 3.6e-198 695.7 624 60.4
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 6.1e-198 694.9 653 60.6
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 1.4e-197 693.7 677 57.2
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 2.3e-197 693.0 577 63.6
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 2.3e-197 693.0 663 62.6
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 3.0e-197 692.6 580 63.6
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 6.7e-197 691.4 624 59.5
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 3.3e-196 689.1 671 62.0
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 9.7e-196 687.6 605 60.7
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 2.2e-195 686.4 668 58.5
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 4.8e-195 685.3 598 61.9
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 2.6e-193 679.5 645 57.2
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 7.7e-193 677.9 663 55.5
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 1.1e-191 674.1 663 59.7
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 7.2e-191 671.4 643 58.5
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 3.6e-190 669.1 658 56.8
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 8.0e-190 667.9 543 67.0
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 5.2e-189 665.2 587 63.7
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 1.2e-188 664.1 588 61.2
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 2.0e-188 663.3 588 59.5
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 4.1e-186 655.6 660 55.2
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 5.9e-185 651.7 647 58.1
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 1.0e-184 651.0 606 59.4
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 1.7e-184 650.2 667 54.3
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 4.0e-181 639.0 578 62.1
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 8.8e-181 637.9 585 57.9
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 3.7e-179 632.5 671 53.8
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 4.8e-179 632.1 622 56.4
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 3.1e-178 629.4 570 60.2
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 4.1e-178 629.0 648 56.2
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 3.5e-177 625.9 592 59.1
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 5.9e-177 625.2 627 58.7
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 1.0e-176 624.4 650 55.8
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 1.0e-176 624.4 656 56.4
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 3.8e-176 622.5 597 56.1
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 3.8e-176 622.5 578 56.4
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 3.8e-176 622.5 610 55.6
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 8.6e-176 621.3 592 56.4
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 2.5e-175 619.8 562 60.1
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 4.2e-175 619.0 590 59.3
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 5.5e-175 618.6 539 61.8
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 5.2e-173 612.1 585 61.2
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 4.9e-171 605.5 584 57.2
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 8.3e-171 604.7 620 56.1
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 2.7e-169 599.7 618 55.3
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 3.3e-167 592.8 606 57.8
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 8.9e-165 584.7 459 67.1
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 1.2e-164 584.3 594 54.0
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 2.0e-164 583.6 614 53.7
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 9.8e-164 581.3 612 56.0
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 2.9e-163 579.7 471 62.4
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 5.4e-162 575.5 528 63.4
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 6.0e-161 572.0 593 55.1
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 1.5e-156 557.4 444 65.5
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 2.3e-149 533.5 551 52.3
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 2.5e-143 513.5 553 53.9
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 4.2e-138 496.1 595 49.7
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 4.5e-116 422.9 607 42.8
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 4.2e-106 389.8 287 66.6
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 8.0e-81 305.8 642 38.0
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 8.0e-81 305.8 642 38.0
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 2.9e-67 260.8 156 85.9
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 2.7e-60 237.7 448 34.6
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 1.2e-47 195.7 427 31.6
VMungo0647G0587 Vigna mungo HOM05D006787 ORTHO05D008366 6.0e-44 183.3 107 85.0
VMungo0464G0544 Vigna mungo HOM05D006787 ORTHO05D008366 3.1e-40 171.0 113 77.0
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 2.3e-32 144.8 138 55.1
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 5.2e-32 143.7 194 42.8
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 1.9e-18 98.6 230 30.4
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.5e-18 98.2 190 35.8
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 3.1e-16 91.3 122 41.8
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 1.3e-09 69.3 120 34.2
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.8e-09 68.2 324 27.8
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 4.8e-09 67.4 96 44.8
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 5.3e-08 63.9 50 50.0
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 9.0e-08 63.2 307 24.4
SMO137G0071 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.0e-07 62.0 86 33.7


User provided reference genes

Program Settings