Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 1.6e-155 552.7 280 100.0
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 1.7e-40 170.6 112 81.2
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 1.7e-40 170.6 115 82.6
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 2.2e-40 170.2 132 74.2
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 5.4e-39 165.6 113 80.5
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 7.0e-39 165.2 109 81.7
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 2.7e-38 163.3 115 80.9
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 2.7e-38 163.3 115 80.9
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 6.0e-38 162.2 111 78.4
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 6.0e-38 162.2 115 80.0
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 1.3e-37 161.0 112 76.8
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 2.3e-37 160.2 115 79.1
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 1.1e-36 157.9 112 75.9
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 4.7e-35 152.5 135 68.9
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 1.5e-33 147.5 116 70.7
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 1.1e-26 124.8 90 78.9
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 1.1e-26 124.8 126 61.9
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 1.4e-26 124.4 110 60.0
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 2.3e-26 123.6 111 60.4
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 8.9e-26 121.7 116 56.0
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 1.2e-25 121.3 109 59.6
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 1.2e-25 121.3 116 57.8
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 2.6e-25 120.2 112 58.0
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 4.4e-25 119.4 103 61.2
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 5.8e-25 119.0 106 59.4
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 9.9e-25 118.2 109 56.9
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 9.9e-25 118.2 112 58.0
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 1.7e-24 117.5 112 58.0
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 1.7e-24 117.5 113 56.6
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 2.2e-24 117.1 105 61.0
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 2.2e-24 117.1 112 57.1
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 2.9e-24 116.7 112 58.0
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 3.7e-24 116.3 106 56.6
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 6.4e-24 115.5 115 55.7
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 1.1e-23 114.8 106 58.5
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 1.1e-23 114.8 108 58.3
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 1.4e-23 114.4 115 56.5
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 4.1e-23 112.8 99 63.6
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 7.1e-23 112.1 114 52.6
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 7.1e-23 112.1 101 59.4
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 9.2e-23 111.7 107 57.9
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 9.2e-23 111.7 115 52.2
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 9.2e-23 111.7 105 54.3
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 9.2e-23 111.7 109 57.8
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 1.2e-22 111.3 112 58.0
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 1.2e-22 111.3 115 52.2
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 1.6e-22 110.9 109 56.0
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 1.6e-22 110.9 108 56.5
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 2.1e-22 110.5 105 58.1
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 2.1e-22 110.5 105 58.1
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 2.1e-22 110.5 114 56.1
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 2.7e-22 110.2 106 56.6
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 2.7e-22 110.2 111 55.0
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 3.5e-22 109.8 111 55.0
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 4.6e-22 109.4 105 52.4
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 4.6e-22 109.4 108 56.5
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 7.8e-22 108.6 112 56.2
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 7.8e-22 108.6 103 59.2
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 1.3e-21 107.8 103 52.4
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.3e-21 107.8 103 52.4
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.3e-21 107.8 103 52.4
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 1.7e-21 107.5 110 57.3
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 3.0e-21 106.7 112 57.1
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 3.0e-21 106.7 114 54.4
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 3.0e-21 106.7 109 54.1
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 3.9e-21 106.3 113 51.3
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 5.1e-21 105.9 113 51.3
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 5.1e-21 105.9 103 57.3
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 6.6e-21 105.5 103 56.3
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 8.6e-21 105.1 108 54.6
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 8.6e-21 105.1 105 56.2
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 1.1e-20 104.8 113 53.1
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 1.1e-20 104.8 112 55.4
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 1.1e-20 104.8 108 53.7
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 1.1e-20 104.8 103 59.2
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 1.5e-20 104.4 121 50.4
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 1.9e-20 104.0 105 57.1
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 3.3e-20 103.2 103 55.3
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 3.3e-20 103.2 99 58.6
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 5.6e-20 102.4 111 51.4
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 7.3e-20 102.1 110 52.7
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 3.6e-19 99.8 110 53.6
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 6.2e-19 99.0 105 51.4
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 6.2e-19 99.0 100 57.0
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 2.4e-18 97.1 106 50.0
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 5.2e-18 95.9 106 50.9
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 8.9e-18 95.1 108 49.1
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 2.0e-17 94.0 107 49.5
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 7.6e-17 92.0 99 53.5
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 1.3e-16 91.3 163 39.9
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 1.1e-15 88.2 91 54.9
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 1.4e-15 87.8 89 55.1
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 7.1e-15 85.5 109 46.8
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 4.6e-14 82.8 82 56.1
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 1.3e-13 81.3 92 54.3
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 2.3e-13 80.5 84 54.8
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 3.0e-13 80.1 118 42.4
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 5.1e-13 79.3 92 50.0
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 8.7e-13 78.6 77 57.1
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 2.5e-12 77.0 82 52.4
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 9.6e-12 75.1 69 59.4
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 1.8e-10 70.9 104 43.3
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 9.3e-07 58.5 110 37.3


User provided reference genes

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