Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G198900 Theobroma cacao HOM05D010356 ORTHO05D000034 1.3e-59 233.0 129 100.0
Thecc.02G165200 Theobroma cacao HOM05D010356 ORTHO05D000034 4.5e-33 144.8 128 61.7
Thecc.06G081500 Theobroma cacao HOM05D010356 ORTHO05D000034 5.9e-33 144.4 130 66.9
Thecc.02G145100 Theobroma cacao HOM05D010356 ORTHO05D000034 2.5e-31 139.0 130 66.2
Thecc.09G178000 Theobroma cacao HOM05D010356 ORTHO05D000034 2.8e-27 125.6 108 63.0
Thecc.07G155400 Theobroma cacao HOM05D010356 ORTHO05D000034 6.3e-27 124.4 115 67.0
Thecc.K0005200 Theobroma cacao HOM05D010356 ORTHO05D000034 6.3e-27 124.4 82 75.6
Thecc.06G051600 Theobroma cacao HOM05D010356 ORTHO05D000034 8.3e-27 124.0 82 74.4
Thecc.09G221700 Theobroma cacao HOM05D010356 ORTHO05D000034 3.1e-26 122.1 113 65.5
Thecc.10G098600 Theobroma cacao HOM05D010356 ORTHO05D000034 3.5e-25 118.6 82 73.2
Thecc.06G063200 Theobroma cacao HOM05D010356 ORTHO05D000034 3.8e-24 115.2 72 80.6
Thecc.05G109400 Theobroma cacao HOM05D010356 ORTHO05D000034 2.9e-19 99.0 113 48.7
Thecc.07G133700 Theobroma cacao HOM05D010356 ORTHO05D000034 1.9e-15 86.3 128 44.5
COL.COLO4_36823 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.4e-13 80.1 106 45.3
Thecc.03G068000 Theobroma cacao HOM05D000128 ORTHO05D000059 6.8e-13 77.8 97 46.4
COL.COLO4_28182 Corchorus olitorius HOM05D009765 ORTHO05D011896 5.4e-10 68.2 79 40.5
COL.COLO4_06056 Corchorus olitorius HOM05D009765 ORTHO05D000002 7.0e-10 67.8 79 39.2
COL.COLO4_12220 Corchorus olitorius HOM05D009765 ORTHO05D011896 9.2e-10 67.4 79 40.5
COL.COLO4_34400 Corchorus olitorius HOM05D009765 ORTHO05D011896 4.6e-09 65.1 79 39.2
Thecc.04G085300 Theobroma cacao HOM05D010356 ORTHO05D013132 6.0e-09 64.7 78 64.1
COL.COLO4_08112 Corchorus olitorius HOM05D009765 ORTHO05D011896 1.7e-08 63.2 80 36.2
COL.COLO4_15588 Corchorus olitorius HOM05D009765 ORTHO05D011896 2.3e-08 62.8 79 38.0
Thecc.10G110800 Theobroma cacao HOM05D010356 ORTHO05D000034 5.0e-08 61.6 68 55.9
Thecc.10G146700 Theobroma cacao HOM05D010356 ORTHO05D000034 1.9e-07 59.7 76 50.0
COL.COLO4_36098 Corchorus olitorius HOM05D009765 ORTHO05D011896 9.5e-07 57.4 75 34.7
Thecc.07G165400 Theobroma cacao HOM05D010356 ORTHO05D013587 1.2e-06 57.0 81 50.6
Oeu004128.1 Olea europaea HOM05D008284 ORTHO05D000224 6.2e-06 54.7 76 35.5


User provided reference genes

Program Settings