Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.02G131200 Theobroma cacao HOM05D007840 ORTHO05D010355 2.1e-24 115.9 122 100.0
Duzib132G1245 Durio zibethinus HOM05D007840 ORTHO05D010355 3.9e-10 68.6 126 77.8
Duzib187G0604 Durio zibethinus HOM05D007840 ORTHO05D010355 6.2e-08 61.2 35 91.4
Thecc.09G153700 Theobroma cacao HOM05D007840 ORTHO05D010355 8.1e-08 60.8 128 73.4
Gohir.A12G016400 Gossypium hirsutum HOM05D007840 ORTHO05D010355 1.4e-07 60.1 33 87.9
Gohir.D12G016700 Gossypium hirsutum HOM05D007840 ORTHO05D010355 1.4e-07 60.1 33 87.9
Gohir.D13G054000 Gossypium hirsutum HOM05D007840 ORTHO05D010355 1.4e-07 60.1 125 44.0
Gorai.008G016900 Gossypium raimondii HOM05D007840 ORTHO05D010355 1.4e-07 60.1 33 87.9
Gorai.013G060800 Gossypium raimondii HOM05D007840 ORTHO05D010355 1.4e-07 60.1 125 44.0
Gohir.A13G067700 Gossypium hirsutum HOM05D007840 ORTHO05D010355 3.1e-07 58.9 129 39.5
Gohir.A13G051800 Gossypium hirsutum HOM05D007840 ORTHO05D010355 5.3e-07 58.2 34 85.3
Gorai.013G056100 Gossypium raimondii HOM05D007840 ORTHO05D010355 5.3e-07 58.2 34 85.3
Gorai.013G056400 Gossypium raimondii HOM05D007840 ORTHO05D010355 5.3e-07 58.2 34 85.3
Gorai.013G058900 Gossypium raimondii HOM05D007840 ORTHO05D010355 5.3e-07 58.2 34 85.3
Manes.10G100844 Manihot esculenta HOM05D010549 ORTHO05D010355 1.2e-06 57.0 34 82.4
Thecc.02G135500 Theobroma cacao HOM05D007840 ORTHO05D010355 1.2e-06 57.0 128 74.2
Thecc.02G135900 Theobroma cacao HOM05D007840 ORTHO05D010355 1.2e-06 57.0 128 74.2
Gohir.D13G050201 Gossypium hirsutum HOM05D007840 ORTHO05D010355 1.5e-06 56.6 34 82.4
Gohir.D13G050400 Gossypium hirsutum HOM05D007840 ORTHO05D010355 1.5e-06 56.6 34 82.4
Gorai.013G056500 Gossypium raimondii HOM05D007840 ORTHO05D010355 1.5e-06 56.6 34 82.4
Gohir.D13G052300 Gossypium hirsutum HOM05D007840 ORTHO05D010355 2.0e-06 56.2 114 37.7
Gohir.A13G069700 Gossypium hirsutum HOM05D007840 ORTHO05D029910 2.6e-06 55.8 123 43.9
Gohir.A13G071000 Gossypium hirsutum HOM05D007840 ORTHO05D218292 2.6e-06 55.8 34 82.4
COL.COLO4_17724 Corchorus olitorius HOM05D007840 ORTHO05D010355 3.4e-06 55.5 34 79.4
Duzib052G0335 Durio zibethinus HOM05D007840 ORTHO05D010355 3.4e-06 55.5 33 84.8
Gohir.D13G050300 Gossypium hirsutum HOM05D007840 ORTHO05D010355 4.5e-06 55.1 33 84.8
Manes.10G101066 Manihot esculenta HOM05D024913 ORTHO05D249649 4.5e-06 55.1 34 82.4
Manes.10G100511 Manihot esculenta HOM05D010549 ORTHO05D010355 5.8e-06 54.7 133 48.9
Gohir.A13G069900 Gossypium hirsutum HOM05D007840 ORTHO05D217865 1.0e-05 53.9 34 79.4


User provided reference genes

Program Settings