Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 2.2e-241 838.6 433 100.0
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 3.9e-198 694.9 434 84.6
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 1.8e-195 686.0 434 81.8
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 4.1e-195 684.9 434 81.8
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 1.8e-158 563.1 440 68.4
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 4.6e-154 548.5 438 66.7
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 1.3e-153 547.0 433 66.7
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 2.3e-150 536.2 441 65.3
COL.COLO4_23116 Corchorus olitorius HOM05D006834 ORTHO05D008623 8.9e-150 534.3 348 85.6
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 2.0e-149 533.1 435 65.3
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 1.1e-147 527.3 433 64.9
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 1.1e-147 527.3 433 64.9
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 2.4e-147 526.2 410 66.6
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 7.8e-146 521.2 440 64.3
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 6.6e-145 518.1 439 63.6
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 6.2e-143 511.5 434 63.6
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 6.2e-143 511.5 419 64.2
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 1.8e-142 510.0 407 64.9
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 4.4e-141 505.4 437 64.1
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 5.8e-141 505.0 415 63.9
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 8.4e-140 501.1 431 61.0
Gohir.D12G123000 Gossypium hirsutum HOM05D006834 ORTHO05D008623 7.8e-138 494.6 333 81.7
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 1.5e-136 490.3 433 60.5
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 3.3e-136 489.2 434 61.3
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 4.3e-136 488.8 442 59.5
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 7.3e-136 488.0 433 59.4
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 9.6e-136 487.6 403 64.3
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 1.6e-135 486.9 411 62.8
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 1.1e-134 484.2 433 58.2
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 1.4e-134 483.8 433 60.0
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 1.4e-134 483.8 412 60.7
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 2.4e-134 483.0 433 60.0
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 5.3e-134 481.9 443 60.5
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 2.0e-133 479.9 407 62.9
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 3.4e-133 479.2 433 58.4
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 4.4e-133 478.8 426 59.4
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 5.8e-133 478.4 412 62.1
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 1.3e-132 477.2 411 61.6
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 1.7e-132 476.9 443 60.3
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 1.7e-132 476.9 403 63.5
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 8.4e-132 474.6 433 57.7
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 3.2e-131 472.6 412 59.2
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 2.7e-130 469.5 386 62.2
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 3.5e-130 469.2 425 57.2
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 4.6e-130 468.8 433 57.0
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 7.8e-130 468.0 433 56.1
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 1.0e-129 467.6 433 57.0
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 1.7e-129 466.8 433 56.6
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 3.9e-129 465.7 436 58.0
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 1.9e-128 463.4 433 56.6
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 6.2e-127 458.4 411 57.2
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 6.9e-126 454.9 417 57.1
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 9.9e-125 451.1 415 57.6
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 2.2e-124 449.9 430 58.6
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 4.9e-124 448.7 425 55.5
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 3.5e-122 442.6 433 55.0
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 7.9e-122 441.4 433 55.2
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 6.7e-121 438.3 433 54.3
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 5.6e-120 435.3 442 54.1
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 7.4e-120 434.9 433 54.0
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 2.8e-119 433.0 442 54.1
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 3.7e-119 432.6 438 54.3
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 3.7e-119 432.6 434 52.3
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 1.4e-118 430.6 421 55.6
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 4.5e-117 425.6 441 53.3
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.7e-116 423.7 437 53.5
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 4.9e-116 422.2 464 51.5
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 4.2e-115 419.1 437 53.1
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 7.1e-115 418.3 442 52.7
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 5.1e-113 412.1 403 54.6
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 7.4e-112 408.3 400 53.5
Manes.05G007900 Manihot esculenta HOM05D006834 ORTHO05D008623 2.8e-111 406.4 354 64.4
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 4.8e-111 405.6 430 52.6
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 6.2e-111 405.2 352 60.5
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 7.6e-109 398.3 426 52.6
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 1.7e-108 397.1 397 52.9
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 5.0e-108 395.6 368 54.3
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 1.4e-107 394.0 400 53.5
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 5.5e-107 392.1 303 65.7
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 9.3e-107 391.3 428 51.6
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 1.2e-106 391.0 441 50.8
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 1.6e-106 390.6 472 46.0
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 7.7e-101 371.7 443 47.9
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 3.2e-99 366.3 433 48.7
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 1.6e-98 364.0 387 51.2
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 1.5e-96 357.5 370 53.8
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 8.2e-95 351.7 437 45.5
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 8.5e-92 341.7 419 45.3
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.8e-86 323.9 437 46.0
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 1.3e-84 317.8 423 43.5
Prupe.3G001500 Prunus persica HOM05D006834 ORTHO05D008623 5.5e-83 312.4 349 54.2
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 3.8e-76 289.7 297 55.9
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 4.7e-74 282.7 370 40.5
Os01g0286000 Oryza sativa ssp. japonica HOM05D006834 ORTHO05D008623 1.8e-73 280.8 395 42.3
Zm00001eb129510 Zea mays HOM05D006834 ORTHO05D008623 3.8e-68 263.1 366 43.2
Mapoly0053s0040 Marchantia polymorpha HOM05D006834 ORTHO05D008623 4.0e-65 253.1 411 36.0
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 6.3e-63 245.7 394 37.3
Sc05g0000050 Simmondsia chinensis HOM05D006834 ORTHO05D008623 8.3e-63 245.4 212 55.2
HPP92_001172 Vanilla planifolia HOM05D006834 ORTHO05D008623 1.8e-62 244.2 237 57.4
Solyc01g079060.4 Solanum lycopersicum HOM05D006834 ORTHO05D008623 2.3e-52 210.7 199 51.3
Peaxi162Scf00309g00622 Petunia axillaris HOM05D006834 ORTHO05D008623 2.0e-45 187.6 207 53.6
Peaxi162Scf00309g00627 Petunia axillaris HOM05D006834 ORTHO05D008623 2.3e-33 147.5 199 42.2
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 9.2e-30 135.6 112 58.0
MELO3C028884.2 Cucumis melo HOM05D006834 ORTHO05D008623 7.1e-22 109.4 106 51.9
MELO3C033776.2 Cucumis melo HOM05D006834 ORTHO05D008623 6.6e-20 102.8 66 62.1
CBR_g12374 Chara braunii HOM05D006834 ORTHO05D008623 6.2e-18 96.3 266 30.5
MELO3C005268.2 Cucumis melo HOM05D006834 ORTHO05D008623 6.2e-18 96.3 63 61.9
MELO3C032404.2 Cucumis melo HOM05D006834 ORTHO05D008623 2.4e-17 94.4 57 61.4
HPP92_010139 Vanilla planifolia HOM05D006834 ORTHO05D008623 1.2e-13 82.0 92 54.3
Sc05g0000060 Simmondsia chinensis HOM05D006834 ORTHO05D008623 9.0e-09 65.9 103 43.7
MELO3C029443.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.3e-07 62.0 35 74.3


User provided reference genes

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