Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G035900 Theobroma cacao HOM05D004035 ORTHO05D004631 2.0e-220 768.8 397 100.0
Duzib147G1708 Durio zibethinus HOM05D004035 ORTHO05D004631 9.8e-204 713.4 397 92.9
Thecc.01G133800 Theobroma cacao HOM05D004035 ORTHO05D004631 2.3e-200 702.2 397 91.9
COL.COLO4_22081 Corchorus olitorius HOM05D004035 ORTHO05D004631 1.4e-197 693.0 397 89.9
Gohir.A11G184400 Gossypium hirsutum HOM05D004035 ORTHO05D004631 2.1e-193 679.1 399 88.5
Gorai.007G203400 Gossypium raimondii HOM05D004035 ORTHO05D004631 2.1e-193 679.1 399 88.7
Gohir.D11G190900 Gossypium hirsutum HOM05D004035 ORTHO05D004631 1.5e-191 672.9 399 88.2
Manes.02G093700 Manihot esculenta HOM05D004035 ORTHO05D004631 3.0e-184 648.7 399 84.2
CiPaw.01G038000 Carya illinoinensis HOM05D004035 ORTHO05D004631 1.6e-182 642.9 399 82.7
GSVIVG01018960001 Vitis vinifera HOM05D004035 ORTHO05D004631 2.1e-182 642.5 399 83.2
Atru.chr3.574 Acer truncatum HOM05D004035 ORTHO05D004631 4.7e-182 641.3 400 83.0
Ciclev10024797m.g Citrus clementina HOM05D004035 ORTHO05D004631 1.4e-181 639.8 399 83.5
QL06p046086 Quercus lobata HOM05D004035 ORTHO05D004631 1.2e-180 636.7 398 82.2
PGR102G3072 Punica granatum HOM05D004035 ORTHO05D004631 2.0e-180 636.0 399 82.0
CANSAT01G0227 Cannabis sativa HOM05D004035 ORTHO05D004631 3.4e-180 635.2 398 82.2
Eucgr.H01269 Eucalyptus grandis HOM05D004035 ORTHO05D004631 4.4e-180 634.8 399 81.2
Potri.005G123000 Populus trichocarpa HOM05D004035 ORTHO05D004631 5.8e-180 634.4 399 81.0
TWI73G0243 Tripterygium wilfordii HOM05D004035 ORTHO05D004631 7.6e-180 634.0 399 81.5
Haze_15090 Corylus avellana HOM05D004035 ORTHO05D004631 3.8e-179 631.7 399 82.5
Cfa004306 Carpinus fangiana HOM05D004035 ORTHO05D004631 1.4e-178 629.8 399 82.2
Dinv39986 Davidia involucrata HOM05D004035 ORTHO05D004631 2.4e-178 629.0 397 82.4
CSS0025574 Camellia sinensis var. sinensis HOM05D004035 ORTHO05D004631 4.2e-178 628.2 399 81.0
Lj2C453G20 Lonicera japonica HOM05D004035 ORTHO05D004631 2.1e-177 625.9 400 80.8
Hma1.2p1_0400F.1_g144430 Hydrangea macrophylla HOM05D004035 ORTHO05D004631 2.7e-177 625.5 399 80.7
Potri.007G025700 Populus trichocarpa HOM05D004035 ORTHO05D004631 4.6e-177 624.8 399 80.5
MD15G1261900 Malus domestica HOM05D004035 ORTHO05D004631 1.0e-176 623.6 399 81.0
Solyc07g056660.4 Solanum lycopersicum HOM05D004035 ORTHO05D004631 6.6e-176 620.9 398 81.2
Prupe.7G154500 Prunus persica HOM05D004035 ORTHO05D004631 1.5e-175 619.8 394 80.7
Nitab4.5_0000178g0040 Nicotiana tabacum HOM05D004035 ORTHO05D004631 3.3e-175 618.6 398 80.7
Actinidia12124 Actinidia chinensis HOM05D004035 ORTHO05D004631 4.3e-175 618.2 399 79.9
Sopen07g030000 Solanum pennellii HOM05D004035 ORTHO05D004631 5.6e-175 617.8 398 80.9
FAN19G0080 Fragaria x ananassa HOM05D004035 ORTHO05D004631 1.6e-174 616.3 403 78.7
Actinidia36560 Actinidia chinensis HOM05D004035 ORTHO05D004631 2.1e-174 615.9 399 79.4
Sabra07G0022700 Salix brachista HOM05D004035 ORTHO05D004631 2.1e-174 615.9 397 79.8
MD02G1147600 Malus domestica HOM05D004035 ORTHO05D004631 8.1e-174 614.0 397 80.1
FvH4_1g13311 Fragaria vesca HOM05D004035 ORTHO05D004631 1.4e-173 613.2 403 78.4
CAN.G1003.4 Capsicum annuum HOM05D004035 ORTHO05D004631 4.0e-173 611.7 398 80.2
Nn1g04984 Nelumbo nucifera HOM05D004035 ORTHO05D004631 5.3e-173 611.3 397 80.1
Nitab4.5_0001385g0050 Nicotiana tabacum HOM05D004035 ORTHO05D004631 1.2e-172 610.1 398 79.9
Gorai.003G015100 Gossypium raimondii HOM05D004035 ORTHO05D004631 2.0e-172 609.4 397 79.8
FAN26G1872 Fragaria x ananassa HOM05D004035 ORTHO05D004631 2.6e-172 609.0 403 77.9
RcHm_v2.0_Chr2g0101581 Rosa chinensis HOM05D004035 ORTHO05D004631 3.4e-172 608.6 405 77.8
MELO3C017565.2 Cucumis melo HOM05D004035 ORTHO05D004631 4.5e-172 608.2 398 78.9
TAR376G0366 Trochodendron aralioides HOM05D004035 ORTHO05D004631 4.5e-172 608.2 398 79.1
ClCG07G009230 Citrullus lanatus HOM05D004035 ORTHO05D004631 1.3e-171 606.7 398 78.4
FAN28G2497 Fragaria x ananassa HOM05D004035 ORTHO05D004631 2.9e-171 605.5 403 77.7
Sed0003321 Sechium edule HOM05D004035 ORTHO05D004631 2.9e-171 605.5 398 78.6
CsaV3_UNG172360 Cucumis sativus L. HOM05D004035 ORTHO05D004631 6.4e-171 604.4 398 78.1
Peaxi162Scf00366g00121 Petunia axillaris HOM05D004035 ORTHO05D004631 6.4e-171 604.4 398 79.9
AUR62004050 Chenopodium quinoa HOM05D004035 ORTHO05D004631 1.1e-170 603.6 397 78.1
AUR62007565 Chenopodium quinoa HOM05D004035 ORTHO05D004631 1.4e-170 603.2 397 78.1
RcHm_v2.0_Chr2g0101111 Rosa chinensis HOM05D004035 ORTHO05D004631 3.5e-169 598.6 402 77.1
Rhsim02G0182400 Rhododendron simsii HOM05D004035 ORTHO05D004631 1.3e-168 596.7 401 77.3
Ca_24847_v3 Cicer arietinum L. HOM05D004035 ORTHO05D004631 1.8e-168 596.3 399 78.7
Cc03_g03620 Coffea canephora HOM05D004035 ORTHO05D004631 6.7e-168 594.3 398 78.6
Solyc02g085220.4 Solanum lycopersicum HOM05D004035 ORTHO05D004631 8.1e-166 587.4 398 77.1
Lj2g0023524 Lotus japonicus HOM05D004035 ORTHO05D004631 1.4e-165 586.6 398 77.4
Sopen02g029920 Solanum pennellii HOM05D004035 ORTHO05D004631 1.4e-165 586.6 398 76.9
vmacro11086 Vaccinium macrocarpon HOM05D004035 ORTHO05D004631 2.4e-165 585.9 420 72.4
Phvul.002G030300 Phaseolus vulgaris HOM05D004035 ORTHO05D004631 4.0e-165 585.1 397 76.3
PGSC0003DMG400003507 Solanum tuberosum HOM05D004035 ORTHO05D004631 6.9e-165 584.3 398 76.9
EL10Ac6g15563 Beta vulgaris HOM05D004035 ORTHO05D004631 1.5e-164 583.2 398 76.1
Glyma.01G176000 Glycine max HOM05D004035 ORTHO05D004631 2.6e-164 582.4 397 75.6
Migut.H00988 Erythranthe guttata HOM05D004035 ORTHO05D004631 4.5e-164 581.6 397 76.6
Ah.02g125200 Amaranthus hybridus HOM05D004035 ORTHO05D004631 2.9e-163 578.9 399 76.9
TPR.G22289 Trifolium pratense HOM05D004035 ORTHO05D004631 6.4e-163 577.8 399 75.7
Glyma.11G068300 Glycine max HOM05D004035 ORTHO05D004631 1.1e-162 577.0 397 75.3
Psat2g159680 Pisum sativum HOM05D004035 ORTHO05D004631 1.2e-161 573.5 398 76.6
VMungo1215G2866 Vigna mungo HOM05D004035 ORTHO05D004631 1.2e-161 573.5 397 74.8
SGA_v2.0_scaffold276G46626 Striga asiatica HOM05D004035 ORTHO05D004631 2.1e-161 572.8 419 72.6
Aqoxy6G01113 Aquilegia oxysepala HOM05D004035 ORTHO05D004631 2.7e-161 572.4 398 74.9
SalBow8G0583 Salvia bowleyana HOM05D004035 ORTHO05D004631 4.6e-161 571.6 392 76.5
ECA246G3379 Erigeron canadensis HOM05D004035 ORTHO05D004631 1.3e-160 570.1 397 73.8
Lalb_Chr09g0322391 Lupinus albus HOM05D004035 ORTHO05D004631 1.9e-159 566.2 405 74.8
Gohir.D03G014800 Gossypium hirsutum HOM05D004035 ORTHO05D004631 2.5e-159 565.8 397 75.8
arahy.Tifrunner.gnm1.ann1.GM6JEQ Arachis hypogaea HOM05D004035 ORTHO05D004631 3.3e-159 565.5 398 74.9
arahy.Tifrunner.gnm1.ann1.6E6Z42 Arachis hypogaea HOM05D004035 ORTHO05D004631 9.6e-159 563.9 398 74.6
HanXRQChr16g0530441 Helianthus annuus HOM05D004035 ORTHO05D004631 1.4e-157 560.1 395 74.9
DCAR_025943 Daucus carota HOM05D004035 ORTHO05D004631 3.1e-157 558.9 398 72.1
PSO675G4195 Papaver somniferum HOM05D004035 ORTHO05D004631 1.2e-156 557.0 396 73.7
Cpa.g.sc1294.1 Carica papaya HOM05D004035 ORTHO05D004631 5.8e-156 554.7 381 77.7
PSO541G3635 Papaver somniferum HOM05D004035 ORTHO05D004631 7.6e-156 554.3 396 73.5
LjContig00448g0016984 Lotus japonicus HOM05D004035 ORTHO05D004631 2.2e-155 552.7 395 73.2
Oeu042264.1 Olea europaea HOM05D004035 ORTHO05D004631 2.2e-155 552.7 417 71.9
Lalb_Chr16g0388281 Lupinus albus HOM05D004035 ORTHO05D004631 4.9e-155 551.6 397 73.0
Medtr8g077680 Medicago truncatula HOM05D004035 ORTHO05D004631 8.4e-155 550.8 395 72.9
MBI07_g11484_MAGBIO Magnolia biondii HOM05D004035 ORTHO05D004631 1.1e-154 550.4 396 73.5
Psat4g092560 Pisum sativum HOM05D004035 ORTHO05D004631 5.5e-154 548.1 395 72.7
Lj1g0016074 Lotus japonicus HOM05D004035 ORTHO05D004631 9.3e-154 547.4 398 72.6
AL7G14420 Arabidopsis lyrata HOM05D004035 ORTHO05D004631 1.3e-152 543.5 400 72.2
Ca_22265_v3 Cicer arietinum L. HOM05D004035 ORTHO05D004631 3.9e-152 542.0 396 71.0
Ca_22279_v3 Cicer arietinum L. HOM05D004035 ORTHO05D004631 3.9e-152 542.0 396 71.0
Aa31LG6G13430 Aethionema arabicum HOM05D004035 ORTHO05D004631 8.7e-152 540.8 398 70.4
AT4G36630 Arabidopsis thaliana HOM05D004035 ORTHO05D004631 1.5e-151 540.0 400 71.5
TPR.G34978 Trifolium pratense HOM05D004035 ORTHO05D004631 1.5e-151 540.0 395 70.4
C07p61810 Brassica napus HOM05D004035 ORTHO05D004631 7.4e-151 537.7 401 71.8
BolC7t46602H Brassica oleracea HOM05D004035 ORTHO05D004631 9.7e-151 537.3 401 71.8
CARHR244970 Cardamine hirsuta HOM05D004035 ORTHO05D004631 9.7e-151 537.3 401 71.8
Thhalv10024305m.g Eutrema salsugineum HOM05D004035 ORTHO05D004631 3.7e-150 535.4 400 71.2
A03p64370 Brassica napus HOM05D004035 ORTHO05D004631 4.8e-150 535.0 401 71.6
BraA03t15502Z Brassica rapa HOM05D004035 ORTHO05D004631 4.8e-150 535.0 401 71.6
Carub.0007s0370 Capsella rubella HOM05D004035 ORTHO05D004631 6.3e-150 534.6 400 71.0
TAR362G0832 Trochodendron aralioides HOM05D004035 ORTHO05D004631 8.2e-150 534.3 395 71.4
Sp7g34290 Schrenkiella parvula HOM05D004035 ORTHO05D004631 1.1e-149 533.9 400 71.2
Nn7g37554 Nelumbo nucifera HOM05D004035 ORTHO05D004631 6.5e-147 524.6 395 69.6
Lsat_1_v5_gn_4_152080 Lactuca sativa HOM05D004035 ORTHO05D004631 8.5e-147 524.2 399 67.4
Lsat_1_v5_gn_3_76401 Lactuca sativa HOM05D004035 ORTHO05D004631 1.1e-146 523.9 377 72.4
arahy.Tifrunner.gnm1.ann1.JC6DGE Arachis hypogaea HOM05D004035 ORTHO05D004631 1.7e-142 510.0 395 66.6
DCAR_017291 Daucus carota HOM05D004035 ORTHO05D004631 4.8e-142 508.4 353 75.4
ECA232G2840 Erigeron canadensis HOM05D004035 ORTHO05D004631 4.8e-142 508.4 397 66.2
arahy.Tifrunner.gnm1.ann1.ZDS5RA Arachis hypogaea HOM05D004035 ORTHO05D004631 1.1e-141 507.3 395 66.6
unitig_52.g17587 Utricularia gibba HOM05D004035 ORTHO05D004631 2.6e-140 502.7 386 67.9
PSO837G0008 Papaver somniferum HOM05D004035 ORTHO05D004631 3.8e-139 498.8 393 66.9
PSO017G4184 Papaver somniferum HOM05D004035 ORTHO05D004631 4.2e-138 495.4 398 66.1
HanXRQChr09g0261471 Helianthus annuus HOM05D004035 ORTHO05D004631 2.7e-137 492.7 398 63.1
ATR0743G236 Amborella trichopoda HOM05D004035 ORTHO05D004631 6.1e-137 491.5 396 65.4
BcaC01g00456 Brassica carinata HOM05D004035 ORTHO05D004631 1.5e-132 476.9 403 65.3
CDE09G0689 Ceratophyllum demersum HOM05D004035 ORTHO05D004631 6.5e-131 471.5 397 62.7
CAN.G358.86 Capsicum annuum HOM05D004035 ORTHO05D004631 4.2e-130 468.8 335 73.7
Zm00001eb055180 Zea mays HOM05D004035 ORTHO05D004631 1.3e-123 447.2 399 60.2
Os03g0715500 Oryza sativa ssp. japonica HOM05D004035 ORTHO05D004631 1.8e-120 436.8 397 58.4
Sc03g0002970 Simmondsia chinensis HOM05D004035 ORTHO05D004631 6.3e-118 428.3 299 73.6
Medtr5g020140 Medicago truncatula HOM05D004035 ORTHO05D004631 4.1e-117 425.6 399 61.4
SEGI_13313 Sequoiadendron giganteum HOM05D004035 ORTHO05D004631 3.6e-113 412.5 417 55.6
PGSC0003DMG400027646 Solanum tuberosum HOM05D004035 ORTHO05D004631 4.0e-112 409.1 264 80.3
HPP92_004247 Vanilla planifolia HOM05D004035 ORTHO05D004631 2.3e-99 366.7 387 53.7
CsaV3_4G004990 Cucumis sativus L. HOM05D004035 ORTHO05D004631 2.1e-81 307.0 196 79.1
AagrBONN_evm.TU.Sc2ySwM_340.480 Anthoceros agrestis HOM05D004035 ORTHO05D004631 2.8e-81 306.6 405 45.7
Mapoly0160s0027 Marchantia polymorpha HOM05D004035 ORTHO05D004631 5.2e-80 302.4 404 45.8
Pp3c10_5300 Physcomitrium patens HOM05D004035 ORTHO05D004631 3.7e-78 296.2 409 44.0
Gohir.A02G165200 Gossypium hirsutum HOM05D004035 ORTHO05D004631 7.1e-77 292.0 178 83.1
A08p22280 Brassica napus HOM05D004035 ORTHO05D004631 1.1e-74 284.6 205 70.2
BraA08t34187Z Brassica rapa HOM05D004035 ORTHO05D004631 1.1e-74 284.6 205 70.2
C03p80030 Brassica napus HOM05D004035 ORTHO05D004631 4.8e-65 252.7 264 56.4
BolC3t20257H Brassica oleracea HOM05D004035 ORTHO05D004631 4.0e-64 249.6 264 56.1
SMO145G0075 Selaginella moellendorffii HOM05D004035 ORTHO05D004631 2.1e-57 227.3 402 36.8
CsaV3_4G004980 Cucumis sativus L. HOM05D004035 ORTHO05D004631 3.4e-55 219.9 173 67.6
TPR.G13595 Trifolium pratense HOM05D004035 ORTHO05D004631 6.7e-35 152.5 140 62.1
Oeu033646.1 Olea europaea HOM05D004035 ORTHO05D004631 1.2e-31 141.7 296 36.8
TPR.G13585 Trifolium pratense HOM05D004035 ORTHO05D004631 2.0e-31 141.0 234 42.7
Oeu009413.1 Olea europaea HOM05D004035 ORTHO05D004631 2.2e-30 137.5 326 35.0
CBR_g34968 Chara braunii HOM05D004035 ORTHO05D004631 7.9e-28 129.0 152 45.4
ATR0800G151 Amborella trichopoda HOM05D004035 ORTHO05D004631 6.3e-25 119.4 203 37.9
SHI32100 Sapria himalayana HOM05D004035 ORTHO05D000001 2.0e-23 114.4 72 77.8
C03p80040 Brassica napus HOM05D004035 ORTHO05D004631 4.7e-20 103.2 101 56.4
BolC3t20258H Brassica oleracea HOM05D004035 ORTHO05D004631 4.7e-20 103.2 101 56.4
Duzib264G0986 Durio zibethinus HOM05D004035 ORTHO05D004631 1.2e-12 78.6 46 82.6
PRCOL_00006719 Prasinoderma coloniale HOM05D004035 ORTHO05D004631 2.7e-12 77.4 402 24.9
Cre06.g278124 Chlamydomonas reinhardtii HOM05D004035 ORTHO05D004631 6.7e-11 72.8 342 23.1


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