Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI79G1602 Tripterygium wilfordii HOM05D003326 ORTHO05D001185 2.0e-115 419.1 204 100.0
Aa31LG5G23270 Aethionema arabicum HOM05D003326 ORTHO05D001185 2.0e-30 136.7 214 39.7
COL.COLO4_27206 Corchorus olitorius HOM05D003326 ORTHO05D001185 3.7e-29 132.5 210 38.1
CANSAT64G1941 Cannabis sativa HOM05D003326 ORTHO05D001185 4.8e-29 132.1 202 41.6
COL.COLO4_29704 Corchorus olitorius HOM05D003326 ORTHO05D001185 9.1e-28 127.9 217 37.3
Carub.0002s1007 Capsella rubella HOM05D003376 ORTHO05D001185 2.5e-25 119.8 209 38.3
ECA248G2717 Erigeron canadensis HOM05D003326 ORTHO05D001185 7.2e-25 118.2 206 38.8
HanXRQChr09g0262551 Helianthus annuus HOM05D003376 ORTHO05D001185 7.2e-25 118.2 205 37.6
HanXRQChr09g0262531 Helianthus annuus HOM05D003376 ORTHO05D001185 1.2e-24 117.5 205 37.6
HanXRQChr09g0262541 Helianthus annuus HOM05D003326 ORTHO05D001185 1.2e-24 117.5 205 37.6
HanXRQChr10g0281971 Helianthus annuus HOM05D003376 ORTHO05D001185 1.2e-24 117.5 205 37.6
Thecc.03G011800 Theobroma cacao HOM05D003326 ORTHO05D001185 2.1e-24 116.7 215 34.0
HanXRQChr09g0262491 Helianthus annuus HOM05D003376 ORTHO05D001185 3.6e-24 115.9 205 38.0
Thhalv10012231m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 4.7e-24 115.5 219 35.6
HanXRQChr09g0262501 Helianthus annuus HOM05D003376 ORTHO05D001185 1.0e-23 114.4 205 37.1
ECA246G2607 Erigeron canadensis HOM05D003326 ORTHO05D001185 1.8e-23 113.6 202 38.6
HanXRQChr09g0262521 Helianthus annuus HOM05D003376 ORTHO05D001185 1.8e-23 113.6 205 37.1
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 1.8e-23 113.6 217 35.5
HanXRQChr09g0267851 Helianthus annuus HOM05D003376 ORTHO05D001185 3.9e-23 112.5 200 37.0
Thhalv10002304m.g Eutrema salsugineum HOM05D003326 ORTHO05D001185 5.7e-22 108.6 223 34.1
HanXRQChr08g0226291 Helianthus annuus HOM05D003326 ORTHO05D001185 1.7e-21 107.1 212 36.8
HanXRQChr10g0281981 Helianthus annuus HOM05D003376 ORTHO05D001185 8.2e-21 104.8 205 35.6
Thecc.01G138100 Theobroma cacao HOM05D003376 ORTHO05D001185 5.3e-20 102.1 184 35.3
HanXRQChr05g0139951 Helianthus annuus HOM05D003376 ORTHO05D001185 2.0e-19 100.1 178 37.6
AL8G17310 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 5.9e-19 98.6 210 34.8
AL88U10020 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 7.7e-19 98.2 210 34.8
Thhalv10001103m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 3.8e-18 95.9 214 32.2
Thhalv10000705m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 8.5e-18 94.7 214 31.8
BcaB05g24045 Brassica carinata HOM05D003326 ORTHO05D001185 1.1e-17 94.4 219 32.9
ECA234G2242 Erigeron canadensis HOM05D000088 ORTHO05D001030 2.5e-17 93.2 201 33.3
Thhalv10000496m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 3.2e-17 92.8 214 31.8
AL1G57140 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 7.2e-17 91.7 195 34.4
Cc00_g26310 Coffea canephora HOM05D003326 ORTHO05D001185 2.0e-14 83.6 169 34.9
BcaB05g22757 Brassica carinata HOM05D003376 ORTHO05D001185 3.3e-14 82.8 217 31.3
HanXRQChr12g0360221 Helianthus annuus HOM05D003376 ORTHO05D001185 5.7e-14 82.0 110 43.6
BcaB04g17120 Brassica carinata HOM05D003326 ORTHO05D001185 1.3e-13 80.9 201 31.3
Cc00_g25700 Coffea canephora HOM05D003326 ORTHO05D001185 2.2e-13 80.1 207 28.0
BcaB07g32859 Brassica carinata HOM05D003376 ORTHO05D001185 2.8e-13 79.7 204 32.4
Thhalv10005702m.g Eutrema salsugineum HOM05D003326 ORTHO05D001185 2.8e-13 79.7 92 44.6
MBI01_g20331_MAGBIO Magnolia biondii HOM05D002707 ORTHO05D002925 3.7e-13 79.3 119 42.0
AT1G37113 Arabidopsis thaliana HOM05D003376 ORTHO05D001185 4.8e-13 79.0 153 35.9
Ca_13201_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 6.3e-13 78.6 165 34.5
COL.COLO4_29280 Corchorus olitorius HOM05D003376 ORTHO05D001185 6.3e-13 78.6 145 33.8
Cc00_g19430 Coffea canephora HOM05D003326 ORTHO05D001185 8.2e-13 78.2 148 32.4
Cc00_g31480 Coffea canephora HOM05D003326 ORTHO05D001185 8.2e-13 78.2 169 33.1
AL6G42760 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 1.4e-12 77.4 198 31.3
Thhalv10001266m.g Eutrema salsugineum HOM05D003326 ORTHO05D001185 4.1e-12 75.9 219 30.1
Thhalv10028029m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 4.1e-12 75.9 177 31.6
Ca_03098_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 5.3e-12 75.5 179 31.3
PGSC0003DMG400038133 Solanum tuberosum HOM05D003326 ORTHO05D001185 5.3e-12 75.5 234 30.3
Thhalv10028038m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 7.0e-12 75.1 189 30.7
Ca_25846_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 9.1e-12 74.7 151 34.4
Thhalv10002187m.g Eutrema salsugineum HOM05D003326 ORTHO05D001185 9.1e-12 74.7 138 36.2
BcaC02g12005 Brassica carinata HOM05D003376 ORTHO05D001185 1.2e-11 74.3 210 30.0
Atru.chr8.845 Acer truncatum HOM05D003326 ORTHO05D001185 1.6e-11 73.9 133 31.6
Atru.chr9.333 Acer truncatum HOM05D005324 ORTHO05D001185 1.6e-11 73.9 161 30.4
Ca_05875_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 2.7e-11 73.2 179 31.8
Cc04_g10970 Coffea canephora HOM05D003376 ORTHO05D001185 2.7e-11 73.2 193 32.1
Ca_14697_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 5.9e-11 72.0 179 31.3
Cc00_g18930 Coffea canephora HOM05D003326 ORTHO05D001185 7.7e-11 71.6 197 27.4
Cc04_g13130 Coffea canephora HOM05D003326 ORTHO05D001185 1.0e-10 71.2 152 32.9
BcaB01g00422 Brassica carinata HOM05D003376 ORTHO05D001185 1.3e-10 70.9 91 41.8
Cc00_g09810 Coffea canephora HOM05D003326 ORTHO05D001185 1.3e-10 70.9 151 31.8
Thhalv10002189m.g Eutrema salsugineum HOM05D003326 ORTHO05D001185 2.9e-10 69.7 91 40.7
Cc00_g28290 Coffea canephora HOM05D003326 ORTHO05D001185 5.0e-10 68.9 175 31.4
Thhalv10017879m.g Eutrema salsugineum HOM05D003326 ORTHO05D001185 5.0e-10 68.9 91 40.7
MBI18_g06088_MAGBIO Magnolia biondii HOM05D033041 ORTHO05D012237 5.0e-10 68.9 145 32.4
Thhalv10006363m.g Eutrema salsugineum HOM05D003326 ORTHO05D001185 6.5e-10 68.6 106 37.7
BolC4t22489H Brassica oleracea HOM05D003376 ORTHO05D001185 1.1e-09 67.8 91 39.6
BraA06t26274Z Brassica rapa HOM05D003376 ORTHO05D001185 1.1e-09 67.8 197 27.9
Lj9C78T4 Lonicera japonica HOM05D003376 ORTHO05D001185 1.5e-09 67.4 196 29.1
Aa31LG2G17660 Aethionema arabicum HOM05D003376 ORTHO05D001185 1.9e-09 67.0 90 38.9
arahy.Tifrunner.gnm1.ann1.AD1LV2 Arachis hypogaea HOM05D003326 ORTHO05D001185 1.9e-09 67.0 97 38.1
Thhalv10027218m.g Eutrema salsugineum HOM05D003376 ORTHO05D001185 1.9e-09 67.0 200 28.0
HanXRQChr09g0262511 Helianthus annuus HOM05D003326 ORTHO05D001185 3.2e-09 66.2 80 45.0
Lj3g0004678 Lotus japonicus HOM05D003326 ORTHO05D001185 4.2e-09 65.9 156 30.8
arahy.Tifrunner.gnm1.ann1.P690U9 Arachis hypogaea HOM05D003326 ORTHO05D001185 5.5e-09 65.5 89 39.3
BolC7t41651H Brassica oleracea HOM05D003326 ORTHO05D001185 5.5e-09 65.5 91 38.5
arahy.Tifrunner.gnm1.ann1.0HP3L6 Arachis hypogaea HOM05D003326 ORTHO05D001185 7.2e-09 65.1 115 34.8
Aa31sc18G160 Aethionema arabicum HOM05D003376 ORTHO05D001185 9.4e-09 64.7 91 38.5
AL3G45060 Arabidopsis lyrata HOM05D003376 ORTHO05D001185 9.4e-09 64.7 91 38.5
MBI10_g10431_MAGBIO Magnolia biondii HOM05D003326 ORTHO05D001185 1.6e-08 63.9 58 51.7
arahy.Tifrunner.gnm1.ann1.A3HRU9 Arachis hypogaea HOM05D003326 ORTHO05D001185 2.1e-08 63.5 90 38.9
arahy.Tifrunner.gnm1.ann1.R1EH1L Arachis hypogaea HOM05D003326 ORTHO05D001185 2.1e-08 63.5 142 30.3
arahy.Tifrunner.gnm1.ann1.2YKR01 Arachis hypogaea HOM05D003326 ORTHO05D001185 2.7e-08 63.2 110 33.6
arahy.Tifrunner.gnm1.ann1.EJ0TY8 Arachis hypogaea HOM05D003326 ORTHO05D001185 2.7e-08 63.2 110 33.6
arahy.Tifrunner.gnm1.ann1.HE13GU Arachis hypogaea HOM05D003326 ORTHO05D001185 2.7e-08 63.2 110 33.6
arahy.Tifrunner.gnm1.ann1.T1YJWD Arachis hypogaea HOM05D003326 ORTHO05D001185 2.7e-08 63.2 110 33.6
Cc00_g33430 Coffea canephora HOM05D003326 ORTHO05D001185 2.7e-08 63.2 89 40.4
arahy.Tifrunner.gnm1.ann1.783CL0 Arachis hypogaea HOM05D003326 ORTHO05D001185 3.6e-08 62.8 89 36.0
arahy.Tifrunner.gnm1.ann1.7QA7DM Arachis hypogaea HOM05D003326 ORTHO05D001185 3.6e-08 62.8 110 33.6
Atru.chr11.222 Acer truncatum HOM05D003326 ORTHO05D001185 4.7e-08 62.4 84 34.5
arahy.Tifrunner.gnm1.ann1.APP048 Arachis hypogaea HOM05D003326 ORTHO05D001185 4.7e-08 62.4 89 36.0
MBI19_g40604_MAGBIO Magnolia biondii HOM05D003326 ORTHO05D001185 4.7e-08 62.4 99 36.4
arahy.Tifrunner.gnm1.ann1.084XQ4 Arachis hypogaea HOM05D003326 ORTHO05D001185 6.1e-08 62.0 89 36.0
arahy.Tifrunner.gnm1.ann1.5V1P5H Arachis hypogaea HOM05D003326 ORTHO05D001185 6.1e-08 62.0 113 32.7
arahy.Tifrunner.gnm1.ann1.88YUGY Arachis hypogaea HOM05D003326 ORTHO05D001185 6.1e-08 62.0 89 36.0
arahy.Tifrunner.gnm1.ann1.8C67T4 Arachis hypogaea HOM05D003326 ORTHO05D001185 6.1e-08 62.0 89 36.0
arahy.Tifrunner.gnm1.ann1.JYPI24 Arachis hypogaea HOM05D003326 ORTHO05D001185 6.1e-08 62.0 89 36.0
arahy.Tifrunner.gnm1.ann1.MBGH1B Arachis hypogaea HOM05D003326 ORTHO05D001185 6.1e-08 62.0 114 32.5
arahy.Tifrunner.gnm1.ann1.WDT0SD Arachis hypogaea HOM05D003326 ORTHO05D001185 6.1e-08 62.0 82 40.2
arahy.Tifrunner.gnm1.ann1.ZE41I9 Arachis hypogaea HOM05D003326 ORTHO05D001185 6.1e-08 62.0 82 40.2
Cc00_g25430 Coffea canephora HOM05D003326 ORTHO05D001185 6.1e-08 62.0 183 27.3
arahy.Tifrunner.gnm1.ann1.JBK91U Arachis hypogaea HOM05D003326 ORTHO05D001185 8.0e-08 61.6 82 40.2
arahy.Tifrunner.gnm1.ann1.JD1TGY Arachis hypogaea HOM05D003326 ORTHO05D001185 8.0e-08 61.6 89 37.1
arahy.Tifrunner.gnm1.ann1.S4F1L5 Arachis hypogaea HOM05D003326 ORTHO05D001185 8.0e-08 61.6 89 38.2
AL1G49020 Arabidopsis lyrata HOM05D003326 ORTHO05D001185 1.0e-07 61.2 61 49.2
arahy.Tifrunner.gnm1.ann1.H66LJ0 Arachis hypogaea HOM05D003326 ORTHO05D001185 1.0e-07 61.2 112 33.0
Ca_04090_v3 Cicer arietinum L. HOM05D005324 ORTHO05D001185 1.0e-07 61.2 179 29.6
Atru.chr3.2329 Acer truncatum HOM05D003326 ORTHO05D001185 1.4e-07 60.8 148 30.4
arahy.Tifrunner.gnm1.ann1.BF47B0 Arachis hypogaea HOM05D003326 ORTHO05D001185 1.4e-07 60.8 89 36.0
arahy.Tifrunner.gnm1.ann1.BXC00F Arachis hypogaea HOM05D003326 ORTHO05D001185 1.4e-07 60.8 108 33.3
arahy.Tifrunner.gnm1.ann1.EEK7ZA Arachis hypogaea HOM05D003326 ORTHO05D001185 1.4e-07 60.8 89 36.0
arahy.Tifrunner.gnm1.ann1.G2DTYI Arachis hypogaea HOM05D003326 ORTHO05D001185 1.4e-07 60.8 89 37.1
arahy.Tifrunner.gnm1.ann1.MID8EZ Arachis hypogaea HOM05D003326 ORTHO05D001185 1.4e-07 60.8 86 36.0
arahy.Tifrunner.gnm1.ann1.QSM5NQ Arachis hypogaea HOM05D003326 ORTHO05D001185 1.4e-07 60.8 126 33.3
arahy.Tifrunner.gnm1.ann1.S8XP71 Arachis hypogaea HOM05D003326 ORTHO05D001185 1.4e-07 60.8 89 37.1
arahy.Tifrunner.gnm1.ann1.9FQ0IP Arachis hypogaea HOM05D003326 ORTHO05D001185 1.8e-07 60.5 89 36.0
arahy.Tifrunner.gnm1.ann1.HK8WXM Arachis hypogaea HOM05D003326 ORTHO05D001185 1.8e-07 60.5 89 36.0
MBI09_g09409_MAGBIO Magnolia biondii HOM05D033041 ORTHO05D012237 1.8e-07 60.5 149 32.2
arahy.Tifrunner.gnm1.ann1.A3WBL0 Arachis hypogaea HOM05D003326 ORTHO05D001185 2.3e-07 60.1 90 35.6
arahy.Tifrunner.gnm1.ann1.LN6MWW Arachis hypogaea HOM05D003326 ORTHO05D001185 2.3e-07 60.1 89 36.0
arahy.Tifrunner.gnm1.ann1.YCY1NI Arachis hypogaea HOM05D003326 ORTHO05D001185 2.3e-07 60.1 110 34.5
arahy.Tifrunner.gnm1.ann1.0UPE7W Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.8K14M7 Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.9ZJH4F Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.AW1PKI Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 113 33.6
arahy.Tifrunner.gnm1.ann1.E2NVMS Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.IBJ5LZ Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.IN5P9W Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.L8J0GX Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.M6G3TG Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.NEW08B Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 32.7
arahy.Tifrunner.gnm1.ann1.RB8DZM Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.SL1W9W Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.SY9XN6 Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.UIKC0H Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.V2TLG0 Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.VYZQ25 Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.W8EP8X Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.WVQL0W Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.Y2LCQH Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.YX1HQ0 Arachis hypogaea HOM05D003326 ORTHO05D001185 4.0e-07 59.3 110 34.5
arahy.Tifrunner.gnm1.ann1.0X4P3P Arachis hypogaea HOM05D003326 ORTHO05D001185 5.2e-07 58.9 110 32.7
arahy.Tifrunner.gnm1.ann1.R8RS53 Arachis hypogaea HOM05D003326 ORTHO05D001185 6.8e-07 58.5 86 36.0
ECA236G2931 Erigeron canadensis HOM05D003376 ORTHO05D001185 6.8e-07 58.5 67 47.8
PGSC0003DMG400034934 Solanum tuberosum HOM05D003326 ORTHO05D001185 6.8e-07 58.5 76 42.1
arahy.Tifrunner.gnm1.ann1.48J706 Arachis hypogaea HOM05D003326 ORTHO05D001185 8.8e-07 58.2 81 35.8
arahy.Tifrunner.gnm1.ann1.4DTP6U Arachis hypogaea HOM05D003326 ORTHO05D001185 8.8e-07 58.2 89 36.0
arahy.Tifrunner.gnm1.ann1.0MZ008 Arachis hypogaea HOM05D003326 ORTHO05D001185 1.5e-06 57.4 87 36.8
arahy.Tifrunner.gnm1.ann1.490G3U Arachis hypogaea HOM05D003326 ORTHO05D001185 1.5e-06 57.4 81 35.8
arahy.Tifrunner.gnm1.ann1.KK7JF8 Arachis hypogaea HOM05D003326 ORTHO05D001185 2.0e-06 57.0 110 32.7
arahy.Tifrunner.gnm1.ann1.ZV38DD Arachis hypogaea HOM05D003326 ORTHO05D001185 2.6e-06 56.6 89 34.8
arahy.Tifrunner.gnm1.ann1.LZ7AI2 Arachis hypogaea HOM05D003326 ORTHO05D001185 3.4e-06 56.2 110 31.8
BraA04t16926Z Brassica rapa HOM05D003326 ORTHO05D001185 3.4e-06 56.2 81 37.0
arahy.Tifrunner.gnm1.ann1.1C16DM Arachis hypogaea HOM05D003326 ORTHO05D001185 5.7e-06 55.5 89 32.6
arahy.Tifrunner.gnm1.ann1.9MWU6M Arachis hypogaea HOM05D003326 ORTHO05D001185 5.7e-06 55.5 71 38.0
arahy.Tifrunner.gnm1.ann1.PG6Y74 Arachis hypogaea HOM05D003326 ORTHO05D001185 9.8e-06 54.7 80 35.0


User provided reference genes

Program Settings