Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 4.7e-238 827.4 403 100.0
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 5.2e-168 594.7 402 71.6
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 3.7e-166 588.6 402 72.4
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 1.9e-162 576.2 407 71.3
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 8.0e-161 570.9 405 70.1
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 1.8e-160 569.7 403 70.2
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 1.2e-159 567.0 405 69.9
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 3.4e-159 565.5 395 69.1
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 7.5e-159 564.3 402 67.9
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 2.8e-158 562.4 401 67.6
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 4.9e-158 561.6 403 70.7
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 8.3e-158 560.8 403 70.5
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 3.1e-157 558.9 405 70.9
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 2.9e-155 552.4 406 67.0
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 7.3e-154 547.7 393 67.9
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 2.8e-153 545.8 407 67.8
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 3.6e-153 545.4 407 67.3
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 1.4e-152 543.5 403 68.5
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 8.9e-152 540.8 403 67.0
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.2e-151 540.4 399 66.7
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 2.0e-151 539.7 386 68.9
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 7.5e-151 537.7 403 65.3
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 1.1e-149 533.9 404 64.1
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 1.7e-147 526.6 412 65.5
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 4.3e-146 521.9 401 64.6
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 4.4e-143 511.9 404 64.6
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.9e-141 506.5 412 65.5
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 2.4e-141 506.1 404 62.9
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 6.6e-139 498.0 401 64.3
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 6.6e-139 498.0 404 61.4
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.2e-137 493.8 375 65.9
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 2.1e-137 493.0 412 59.2
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 4.0e-136 488.8 407 62.9
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 5.2e-136 488.4 406 60.1
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 1.5e-135 486.9 409 61.9
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 2.0e-135 486.5 408 60.8
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 2.0e-135 486.5 404 60.6
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 2.6e-135 486.1 404 62.4
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 9.8e-135 484.2 404 62.1
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 3.7e-134 482.3 375 64.8
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 6.4e-134 481.5 403 60.0
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 1.9e-133 479.9 415 59.5
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 1.9e-133 479.9 407 59.0
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 7.1e-133 478.0 406 61.3
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 9.2e-133 477.6 337 69.4
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 1.2e-132 477.2 425 56.0
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 1.3e-131 473.8 404 58.9
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 1.7e-131 473.4 402 60.7
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 6.6e-131 471.5 403 59.3
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 9.5e-130 467.6 346 65.6
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 1.2e-129 467.2 401 58.9
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 1.6e-129 466.8 406 59.4
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 2.1e-129 466.5 407 58.0
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 2.8e-129 466.1 407 58.0
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 1.1e-128 464.2 407 57.5
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 1.4e-128 463.8 404 56.4
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 5.2e-128 461.8 404 57.9
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 6.8e-128 461.5 404 57.7
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 8.9e-128 461.1 415 58.3
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 2.6e-127 459.5 404 56.4
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 3.2e-125 452.6 404 56.9
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 7.1e-125 451.4 410 58.3
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 7.1e-125 451.4 376 59.3
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 1.2e-124 450.7 404 57.2
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 2.1e-124 449.9 376 60.1
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 1.0e-123 447.6 327 67.3
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 2.3e-123 446.4 402 58.2
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 3.0e-123 446.0 290 72.8
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 1.9e-122 443.4 407 57.5
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 1.9e-122 443.4 407 57.5
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 1.9e-122 443.4 407 57.5
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 1.9e-122 443.4 395 57.7
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.9e-122 443.4 330 68.2
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 4.3e-122 442.2 383 59.3
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 1.2e-121 440.7 402 56.5
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 3.6e-121 439.1 407 56.5
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 2.0e-119 433.3 421 53.4
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 4.4e-119 432.2 404 54.2
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 1.3e-118 430.6 405 56.3
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 2.2e-118 429.9 271 74.2
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 7.1e-117 424.9 405 55.8
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 1.6e-116 423.7 404 53.7
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 2.7e-116 422.9 373 57.4
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 4.6e-116 422.2 245 80.8
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 1.9e-114 416.8 250 79.2
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 4.8e-113 412.1 350 62.6
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 6.2e-113 411.8 400 53.5
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 2.0e-111 406.8 344 57.0
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 2.2e-110 403.3 325 59.7
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 2.9e-110 402.9 316 58.9
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 1.5e-106 390.6 338 58.3
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 1.1e-104 384.4 403 50.1
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 2.4e-101 373.2 406 48.8
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 1.8e-96 357.1 215 80.0
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 3.2e-93 346.3 256 64.8
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 4.1e-88 329.3 403 46.2
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 1.0e-78 298.1 403 41.9
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 1.3e-62 244.6 149 73.8
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 3.3e-58 229.9 309 37.9
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 4.2e-53 213.0 374 34.0
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 1.2e-50 204.9 174 58.6
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 2.6e-50 203.8 272 39.7
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.8e-48 197.6 119 79.8
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 4.5e-47 193.0 223 48.4
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 1.0e-46 191.8 326 37.1
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 8.6e-46 188.7 141 65.2
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 8.6e-46 188.7 141 65.2
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 5.2e-35 152.9 199 47.7
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 4.4e-34 149.8 157 49.0
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 8.3e-33 145.6 99 75.8
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 8.3e-33 145.6 126 54.8
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 1.7e-25 121.3 278 30.2
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 3.6e-20 103.6 225 30.7
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 8.9e-11 72.4 94 46.8
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 3.4e-10 70.5 92 46.7
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 1.4e-08 65.1 140 30.0


User provided reference genes

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