Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI63G0745 Tripterygium wilfordii HOM05D008995 ORTHO05D000074 2.4e-68 261.9 122 100.0
TWI34G1020 Tripterygium wilfordii HOM05D008995 ORTHO05D000074 2.5e-17 92.4 106 49.1
Lj2g0018976 Lotus japonicus HOM05D008995 ORTHO05D000074 1.4e-12 76.6 110 36.4
Ciclev10006721m.g Citrus clementina HOM05D008995 ORTHO05D000074 2.4e-12 75.9 110 40.9
Sed0022040 Sechium edule HOM05D008995 ORTHO05D000074 5.4e-12 74.7 111 34.2
FAN11G1982 Fragaria x ananassa HOM05D008995 ORTHO05D000074 1.6e-11 73.2 112 35.7
FvH4_3g27200 Fragaria vesca HOM05D008995 ORTHO05D000074 6.0e-11 71.2 101 38.6
Nn4g24366 Nelumbo nucifera HOM05D008995 ORTHO05D000074 1.8e-10 69.7 111 37.8
RcHm_v2.0_Chr4g0434481 Rosa chinensis HOM05D008995 ORTHO05D000074 1.8e-10 69.7 110 32.7
FAN16G1355 Fragaria x ananassa HOM05D008995 ORTHO05D000074 3.0e-10 68.9 112 34.8
Dinv05663 Davidia involucrata HOM05D008995 ORTHO05D000074 3.9e-10 68.6 115 34.8
FAN25G1763 Fragaria x ananassa HOM05D008995 ORTHO05D000074 5.1e-10 68.2 111 32.4
Prupe.6G178100 Prunus persica HOM05D008995 ORTHO05D000074 1.1e-09 67.0 115 37.4
Dinv14513 Davidia involucrata HOM05D008995 ORTHO05D000074 1.9e-09 66.2 115 33.9
COL.COLO4_29554 Corchorus olitorius HOM05D008995 ORTHO05D000074 2.1e-08 62.8 109 37.6
Dinv23119 Davidia involucrata HOM05D000003 ORTHO05D000004 2.1e-08 62.8 115 30.4
Glyma.09G116200 Glycine max HOM05D008995 ORTHO05D000074 6.2e-08 61.2 91 38.5
Prupe.6G174300 Prunus persica HOM05D008995 ORTHO05D000074 6.2e-08 61.2 117 36.8
MD13G1035900 Malus domestica HOM05D008995 ORTHO05D000074 1.4e-07 60.1 99 34.3
CANSAT01G2492 Cannabis sativa HOM05D008995 ORTHO05D000074 3.1e-07 58.9 101 34.7
Nn7g38181 Nelumbo nucifera HOM05D001286 ORTHO05D000440 6.9e-07 57.8 113 30.1
RcHm_v2.0_Chr6g0247891 Rosa chinensis HOM05D007346 ORTHO05D009044 6.9e-07 57.8 110 37.3
FAN03G0557 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.0e-07 57.4 103 37.9
FAN03G2041 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.0e-07 57.4 103 37.9
RcHm_v2.0_Chr4g0393391 Rosa chinensis HOM05D007346 ORTHO05D009044 1.2e-06 57.0 105 34.3
FvH4_4g01590 Fragaria vesca HOM05D007346 ORTHO05D009044 2.0e-06 56.2 104 34.6
FAN12G2737 Fragaria x ananassa HOM05D007346 ORTHO05D009044 2.0e-06 56.2 104 34.6
Rhsim08G0222200 Rhododendron simsii HOM05D000013 ORTHO05D000667 2.0e-06 56.2 61 54.1
FvH4_2g03062 Fragaria vesca HOM05D007346 ORTHO05D009044 2.6e-06 55.8 121 31.4
Actinidia01831 Actinidia chinensis HOM05D000151 ORTHO05D000074 3.4e-06 55.5 102 33.3
FvH4_4g01970 Fragaria vesca HOM05D007346 ORTHO05D009044 3.4e-06 55.5 102 34.3
FAN12G0105 Fragaria x ananassa HOM05D007346 ORTHO05D009044 3.4e-06 55.5 102 34.3
Lalb_Chr17g0338871 Lupinus albus HOM05D008995 ORTHO05D000074 3.4e-06 55.5 89 32.6
FAN17G0274 Fragaria x ananassa HOM05D007346 ORTHO05D009044 4.5e-06 55.1 102 32.4
RcHm_v2.0_Chr5g0063131 Rosa chinensis HOM05D007346 ORTHO05D009044 4.5e-06 55.1 92 37.0
Dinv43794 Davidia involucrata HOM05D000151 ORTHO05D000074 5.8e-06 54.7 106 30.2
Dinv43798 Davidia involucrata HOM05D000713 ORTHO05D000547 5.8e-06 54.7 106 30.2
FvH4_7g29040 Fragaria vesca HOM05D000151 ORTHO05D000074 7.6e-06 54.3 104 37.5
Dinv05292 Davidia involucrata HOM05D003536 ORTHO05D004233 1.0e-05 53.9 101 33.7
FvH4_4g02080 Fragaria vesca HOM05D007346 ORTHO05D009044 1.0e-05 53.9 102 33.3
Rhsim08G0185200 Rhododendron simsii HOM05D000290 ORTHO05D004630 1.0e-05 53.9 61 52.5


User provided reference genes

Program Settings