Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 1.3e-210 736.1 367 100.0
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 2.1e-147 526.2 325 80.6
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 7.8e-147 524.2 321 79.4
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 3.0e-146 522.3 321 79.1
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 5.1e-146 521.5 376 71.0
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 5.1e-146 521.5 379 70.7
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.5e-145 520.0 304 83.2
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.5e-145 520.0 304 83.2
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.5e-145 519.2 304 83.2
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.3e-145 518.8 317 80.4
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 4.3e-145 518.5 304 82.9
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 5.6e-145 518.1 377 69.5
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 1.2e-144 516.9 357 71.4
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 2.1e-144 516.2 322 79.8
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 3.6e-144 515.4 375 68.3
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 6.2e-144 514.6 380 68.9
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 1.4e-143 513.5 373 70.0
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 1.4e-143 513.5 305 81.6
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 2.4e-143 512.7 303 81.5
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 2.4e-143 512.7 317 78.2
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 3.1e-143 512.3 297 81.1
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 5.2e-143 511.5 297 82.8
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 6.9e-143 511.1 384 68.2
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 6.9e-143 511.1 378 69.3
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 6.9e-143 511.1 316 78.8
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 8.9e-143 510.8 357 70.3
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 8.9e-143 510.8 330 76.4
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 8.9e-143 510.8 301 81.4
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 1.2e-142 510.4 301 80.7
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 1.2e-142 510.4 337 72.7
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 2.0e-142 509.6 370 68.6
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 2.0e-142 509.6 374 67.9
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 2.6e-142 509.2 343 73.5
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 3.4e-142 508.8 301 80.4
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 3.4e-142 508.8 309 79.0
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 5.8e-142 508.1 375 69.3
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 1.3e-141 506.9 373 68.9
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 1.3e-141 506.9 372 69.1
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 1.7e-141 506.5 375 69.3
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 1.7e-141 506.5 306 80.7
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 4.9e-141 505.0 375 68.8
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 1.4e-140 503.4 362 70.7
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 1.4e-140 503.4 372 69.4
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 1.9e-140 503.1 360 68.6
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 4.2e-140 501.9 352 70.7
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 7.1e-140 501.1 351 70.1
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 9.3e-140 500.7 372 70.4
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 1.2e-139 500.4 314 77.4
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 1.2e-139 500.4 322 75.2
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.7e-139 499.2 315 74.6
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 3.5e-139 498.8 329 72.3
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 4.6e-139 498.4 369 69.1
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 6.0e-139 498.0 308 75.6
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 6.0e-139 498.0 308 75.6
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 7.8e-139 497.7 302 80.5
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 7.8e-139 497.7 344 70.6
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 1.3e-138 496.9 317 75.4
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 1.3e-138 496.9 364 68.4
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 1.7e-138 496.5 311 75.2
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 2.3e-138 496.1 425 62.8
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 2.3e-138 496.1 315 75.6
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 3.0e-138 495.7 331 73.1
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 3.0e-138 495.7 329 72.0
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 3.9e-138 495.4 317 75.4
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 3.9e-138 495.4 311 74.9
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 3.9e-138 495.4 302 79.5
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 5.1e-138 495.0 293 79.9
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 5.1e-138 495.0 302 80.5
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 6.6e-138 494.6 330 72.1
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 6.6e-138 494.6 308 75.6
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 1.1e-137 493.8 341 68.6
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 5.6e-137 491.5 312 76.3
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 7.3e-137 491.1 297 79.8
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 9.6e-137 490.7 367 66.5
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 9.6e-137 490.7 309 77.3
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 2.1e-136 489.6 378 66.9
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 4.8e-136 488.4 373 66.0
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 4.8e-136 488.4 374 66.3
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 4.8e-136 488.4 291 79.7
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 2.4e-135 486.1 294 78.9
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 3.1e-135 485.7 313 76.0
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 4.0e-135 485.3 304 74.7
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 5.3e-135 485.0 352 71.0
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 6.9e-135 484.6 313 74.8
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 9.9e-134 480.7 298 75.2
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 1.7e-133 479.9 351 67.0
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 3.8e-133 478.8 321 71.0
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 4.9e-133 478.4 316 71.2
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 2.4e-132 476.1 294 75.2
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 2.7e-131 472.6 428 59.3
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 6.0e-131 471.5 291 74.6
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 6.7e-130 468.0 287 77.4
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 4.5e-126 455.3 290 74.1
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 2.9e-125 452.6 269 80.3
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 1.4e-124 450.3 306 72.2
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 4.6e-123 445.3 373 62.2
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 3.4e-118 429.1 297 66.3
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 5.8e-118 428.3 297 67.0
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.6e-115 420.2 297 65.0
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 4.6e-115 418.7 301 64.5
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 6.0e-115 418.3 252 76.6
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 6.0e-115 418.3 291 65.3
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 1.0e-114 417.5 297 65.7
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 5.1e-114 415.2 229 86.5
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 2.8e-112 409.5 296 64.5
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 5.3e-103 378.6 379 55.9
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 5.5e-92 342.0 329 53.8
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 7.2e-92 341.7 182 86.8
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 6.1e-91 338.6 307 60.6
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 8.5e-85 318.2 214 73.8
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 4.0e-82 309.3 190 82.1
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 4.0e-82 309.3 215 66.0
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 6.3e-80 302.0 262 61.1
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 7.7e-78 295.0 273 58.2
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 1.7e-77 293.9 184 76.6
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 9.8e-73 278.1 320 49.4
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 1.2e-49 201.4 242 49.6
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 3.5e-22 110.2 94 57.4
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 3.3e-20 103.6 143 44.8
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 4.3e-20 103.2 143 44.1
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 4.9e-16 89.7 73 61.6
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 1.3e-08 65.1 36 75.0


User provided reference genes

Program Settings