Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 0.0e+00 1276.2 691 100.0
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 2.7e-273 945.3 670 77.2
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 1.9e-218 763.1 605 68.3
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 1.2e-188 664.1 652 59.4
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 9.8e-183 644.4 654 56.7
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 5.0e-179 632.1 654 55.8
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 3.4e-175 619.4 633 56.9
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 1.2e-167 594.3 648 54.6
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 1.1e-162 577.8 579 59.4
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 6.0e-140 502.3 389 70.2
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 4.0e-136 489.6 618 48.5
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 1.1e-133 481.5 626 47.8
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 4.8e-129 466.1 637 45.2
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 1.9e-125 454.1 599 45.1
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 2.1e-124 450.7 596 46.1
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 6.0e-124 449.1 628 45.9
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 8.7e-123 445.3 693 42.7
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 9.6e-122 441.8 609 46.8
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 1.6e-121 441.0 628 44.4
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 2.6e-119 433.7 653 42.1
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 2.9e-118 430.3 565 46.5
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 3.8e-118 429.9 616 45.3
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 6.4e-118 429.1 644 44.7
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 8.4e-118 428.7 643 44.9
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 3.0e-115 420.2 513 52.2
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 3.9e-115 419.9 687 41.0
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 1.5e-114 417.9 601 43.8
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 2.5e-114 417.2 680 42.5
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 9.6e-114 415.2 605 43.6
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 9.6e-114 415.2 610 43.8
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 1.3e-113 414.8 674 40.2
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 6.2e-113 412.5 446 52.7
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 6.9e-112 409.1 551 47.0
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 2.2e-110 404.1 618 42.4
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 1.9e-109 401.0 573 43.6
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 3.2e-109 400.2 413 54.0
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 3.2e-109 400.2 535 46.2
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 2.1e-108 397.5 416 53.4
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 4.6e-108 396.4 642 41.3
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 4.3e-106 389.8 402 53.2
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 1.3e-105 388.3 545 44.6
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 1.6e-105 387.9 573 42.2
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 4.1e-104 383.3 669 38.9
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 4.1e-104 383.3 641 40.2
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 2.6e-103 380.6 603 40.1
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 4.5e-103 379.8 619 40.5
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 7.7e-103 379.0 538 48.1
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 5.0e-102 376.3 689 40.3
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 6.5e-102 375.9 458 45.6
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 8.5e-102 375.6 678 39.2
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 1.2e-100 371.7 675 39.0
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 5.1e-99 366.3 578 40.7
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 2.0e-98 364.4 564 41.1
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 4.3e-98 363.2 319 59.6
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 5.7e-98 362.8 519 42.8
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 4.8e-97 359.8 328 56.4
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 3.1e-96 357.1 309 59.5
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 6.9e-96 355.9 680 37.8
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 5.0e-94 349.7 827 33.3
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 8.5e-94 349.0 350 54.6
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 8.5e-94 349.0 600 40.3
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 7.9e-92 342.4 553 41.2
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 1.0e-91 342.0 458 46.3
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 5.3e-88 329.7 660 39.5
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 9.1e-88 328.9 609 37.3
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 1.2e-87 328.6 374 50.5
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 2.6e-87 327.4 589 37.5
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 5.9e-87 326.2 652 35.6
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 2.2e-86 324.3 658 36.8
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 2.9e-86 323.9 676 36.1
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 5.0e-86 323.2 508 40.2
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 1.2e-84 318.5 317 53.3
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 1.6e-84 318.2 544 37.5
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 2.7e-84 317.4 680 34.6
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 1.0e-83 315.5 443 42.4
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 1.8e-83 314.7 443 42.4
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 3.9e-83 313.5 687 36.7
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 8.8e-83 312.4 317 53.0
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 3.3e-82 310.5 684 34.2
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 2.8e-81 307.4 680 34.9
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 2.8e-81 307.4 708 34.7
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 7.0e-80 302.8 322 49.4
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 2.6e-79 300.8 680 34.7
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 5.0e-78 296.6 590 37.8
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 1.6e-76 291.6 243 61.3
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 8.8e-75 285.8 691 33.7
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 8.8e-75 285.8 323 48.3
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 7.0e-72 276.2 667 34.3
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 9.1e-72 275.8 294 49.3
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 2.0e-71 274.6 193 67.9
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 7.2e-69 266.2 324 46.3
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 4.7e-68 263.5 216 61.6
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 3.4e-66 257.3 313 47.0
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 1.1e-64 252.3 222 55.0
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 4.1e-64 250.4 188 64.9
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 8.3e-57 226.1 269 44.6
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.4e-56 225.3 258 48.1
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 1.7e-54 218.4 245 46.1
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 2.6e-50 204.5 120 74.2
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 7.0e-48 196.4 116 75.0
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 4.3e-45 187.2 573 30.5
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 2.3e-43 181.4 334 38.6
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 5.2e-43 180.3 252 39.3
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 7.8e-39 166.4 182 45.6
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 6.2e-36 156.8 213 47.4
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.2e-28 132.5 322 32.9
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 3.1e-27 127.9 320 33.4
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 1.1e-21 109.4 202 39.1
QL93p0100_0715 Quercus lobata HOM05D006714 ORTHO05D008103 2.3e-06 58.5 122 40.2


User provided reference genes

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