Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 3.6e-191 671.4 330 100.0
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 1.5e-141 506.5 330 76.4
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 6.8e-134 481.1 320 75.6
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 5.8e-117 424.9 326 68.1
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 7.1e-115 417.9 327 67.3
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 1.3e-113 413.7 326 65.3
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 7.3e-112 407.9 327 65.4
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 1.3e-111 407.1 328 66.2
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 2.1e-111 406.4 328 66.5
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 6.2e-111 404.8 331 65.6
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 9.0e-110 401.0 329 65.3
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 3.8e-100 369.0 306 66.0
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 1.2e-98 364.0 325 59.7
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 2.9e-92 342.8 280 65.4
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 5.0e-92 342.0 327 56.6
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 3.2e-91 339.3 318 58.5
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 4.2e-91 339.0 248 64.9
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 1.6e-90 337.0 315 56.8
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 2.7e-90 336.3 281 59.4
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 6.1e-90 335.1 297 58.9
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 6.1e-90 335.1 297 58.9
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 1.0e-89 334.3 334 54.8
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 8.7e-89 331.3 273 61.2
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.1e-88 330.9 297 58.2
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.9e-88 330.1 297 58.6
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 2.5e-88 329.7 315 56.8
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 2.5e-88 329.7 312 57.1
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 2.5e-88 329.7 312 57.1
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 7.4e-88 328.2 237 65.0
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 7.4e-88 328.2 237 65.0
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 9.7e-88 327.8 330 54.2
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 1.3e-87 327.4 334 52.7
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 2.8e-87 326.2 247 66.4
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 6.3e-87 325.1 275 60.0
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 8.2e-87 324.7 250 63.2
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 1.1e-86 324.3 336 54.8
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 1.8e-86 323.6 259 64.9
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 3.1e-86 322.8 315 56.2
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 4.1e-86 322.4 313 57.2
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 6.9e-86 321.6 270 60.4
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 1.2e-85 320.9 330 52.4
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 1.5e-85 320.5 250 62.8
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 2.0e-85 320.1 326 53.1
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 2.0e-85 320.1 266 59.4
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 5.9e-85 318.5 291 57.0
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 5.9e-85 318.5 302 54.6
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 7.7e-85 318.2 238 66.8
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 7.7e-85 318.2 319 53.6
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 1.3e-84 317.4 320 56.2
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 1.7e-84 317.0 310 56.5
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 1.7e-84 317.0 293 57.0
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 2.2e-84 316.6 241 64.3
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 2.9e-84 316.2 250 62.0
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 3.8e-84 315.8 251 63.3
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 5.0e-84 315.5 253 60.9
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 5.0e-84 315.5 313 55.6
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 5.0e-84 315.5 281 57.7
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 8.5e-84 314.7 279 59.9
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 1.1e-83 314.3 324 51.5
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 1.4e-83 313.9 304 55.6
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.9e-83 313.5 323 52.3
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 1.9e-83 313.5 319 53.0
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.9e-83 313.5 253 62.1
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.5e-83 313.2 246 63.8
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 1.2e-82 310.8 251 62.9
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.6e-82 310.5 251 62.5
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 2.7e-82 309.7 235 63.4
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 2.7e-82 309.7 323 52.9
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 3.6e-82 309.3 253 61.3
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 1.4e-81 307.4 251 61.0
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 3.9e-81 305.8 252 62.3
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 8.8e-81 304.7 328 50.3
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 1.1e-80 304.3 248 59.7
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 5.7e-80 302.0 231 65.4
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 1.7e-79 300.4 235 63.0
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 3.7e-79 299.3 311 52.7
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 1.1e-78 297.7 282 54.3
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.1e-78 297.7 235 62.1
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 1.4e-78 297.4 262 55.3
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 2.4e-78 296.6 326 50.6
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 6.9e-78 295.0 237 61.2
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 9.1e-78 294.7 225 62.7
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 2.6e-77 293.1 235 59.1
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 3.4e-77 292.7 334 49.4
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 3.4e-77 292.7 334 49.4
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 2.2e-76 290.0 272 55.5
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 6.5e-76 288.5 248 58.1
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 5.5e-75 285.4 243 56.4
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 7.2e-75 285.0 225 61.8
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 2.7e-74 283.1 225 60.9
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 7.9e-74 281.6 228 60.1
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 3.0e-73 279.6 221 63.3
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 2.6e-72 276.6 237 55.3
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.3e-71 274.2 252 56.3
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 6.3e-71 271.9 213 62.4
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 9.1e-70 268.1 226 61.5
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 1.3e-68 264.2 233 55.4
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 3.8e-68 262.7 371 42.6
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 1.0e-65 254.6 287 48.1
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 5.7e-56 222.2 234 47.4
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 2.2e-55 220.3 166 65.7
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 3.6e-50 203.0 159 63.5
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 6.8e-49 198.7 223 48.9
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 1.8e-46 190.7 151 64.2
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 7.0e-46 188.7 246 43.5
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 2.0e-45 187.2 145 66.9
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 3.5e-45 186.4 283 37.8
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 6.6e-44 182.2 196 52.0
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 7.2e-43 178.7 289 36.7
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 1.2e-42 177.9 237 43.0
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 3.6e-42 176.4 239 43.9
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.5e-40 171.0 136 60.3
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 5.7e-40 169.1 180 50.6
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 6.3e-39 165.6 143 61.5
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 1.6e-37 161.0 156 53.2
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 1.3e-36 157.9 122 59.8
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 9.5e-35 151.8 141 51.8
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 5.2e-33 146.0 116 63.8
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 3.2e-30 136.7 113 60.2
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 3.1e-25 120.2 105 56.2
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 1.2e-24 118.2 120 45.8
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 1.1e-22 111.7 181 41.4
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 3.5e-21 106.7 78 73.1
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.3e-19 100.1 64 76.6
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 8.6e-12 75.5 59 59.3


User provided reference genes

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