Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3425 Trochodendron aralioides HOM05D000156 ORTHO05D001290 7.7e-39 163.3 81 100.0
TAR626G1044 Trochodendron aralioides HOM05D000156 ORTHO05D001290 1.4e-08 62.8 62 61.3
TAR622G0975 Trochodendron aralioides HOM05D002668 ORTHO05D003295 1.9e-08 62.4 62 59.7
Gorai.001G022300 Gossypium raimondii HOM05D000156 ORTHO05D001290 3.2e-08 61.6 71 47.9
Gohir.A07G021800 Gossypium hirsutum HOM05D000156 ORTHO05D001290 4.1e-08 61.2 71 47.9
Gohir.D07G021600 Gossypium hirsutum HOM05D000156 ORTHO05D001290 4.1e-08 61.2 71 47.9
Nn6g35515 Nelumbo nucifera HOM05D000156 ORTHO05D001290 5.4e-08 60.8 61 54.1
Potri.006G226600 Populus trichocarpa HOM05D000156 ORTHO05D001290 5.4e-08 60.8 67 56.7
Sabra06G0175300 Salix brachista HOM05D000156 ORTHO05D001290 5.4e-08 60.8 67 56.7
Cfa017969 Carpinus fangiana HOM05D000521 ORTHO05D000384 9.2e-08 60.1 75 52.0
Manes.16G081700 Manihot esculenta HOM05D000156 ORTHO05D001290 9.2e-08 60.1 62 58.1
TWI32G0473 Tripterygium wilfordii HOM05D000156 ORTHO05D001290 9.2e-08 60.1 77 50.6
CiPaw.15G037300 Carya illinoinensis HOM05D000156 ORTHO05D001290 1.2e-07 59.7 75 52.0
CiPaw.16G027600 Carya illinoinensis HOM05D000156 ORTHO05D001290 1.6e-07 59.3 62 58.1
ClCG05G017970 Citrullus lanatus HOM05D000156 ORTHO05D001290 1.6e-07 59.3 61 54.1
QL02p000935 Quercus lobata HOM05D000156 ORTHO05D001290 1.6e-07 59.3 72 56.9
TAR371G1228 Trochodendron aralioides HOM05D000156 ORTHO05D001290 2.1e-07 58.9 50 64.0
CsaV3_4G035750 Cucumis sativus L. HOM05D000156 ORTHO05D001290 3.5e-07 58.2 61 50.8
TWI63G0128 Tripterygium wilfordii HOM05D000156 ORTHO05D001290 3.5e-07 58.2 66 51.5
MELO3C016880.2 Cucumis melo HOM05D000156 ORTHO05D001290 4.6e-07 57.8 61 50.8
Haze_18162 Corylus avellana HOM05D000156 ORTHO05D001290 7.8e-07 57.0 71 50.7
Duzib168G0281 Durio zibethinus HOM05D000156 ORTHO05D001290 7.8e-07 57.0 76 47.4
Sed0026421 Sechium edule HOM05D000156 ORTHO05D001290 1.0e-06 56.6 76 44.7
GSVIVG01035382001 Vitis vinifera HOM05D000156 ORTHO05D001290 1.0e-06 56.6 72 50.0
COL.COLO4_21079 Corchorus olitorius HOM05D000156 ORTHO05D001290 1.3e-06 56.2 77 49.4
QL01p032824 Quercus lobata HOM05D000156 ORTHO05D001290 1.7e-06 55.8 67 56.7
TPR.G3554 Trifolium pratense HOM05D000156 ORTHO05D001290 2.3e-06 55.5 62 56.5
Psat5g036280 Pisum sativum HOM05D000156 ORTHO05D001290 3.0e-06 55.1 63 54.0
Psat5g036320 Pisum sativum HOM05D000156 ORTHO05D001290 3.0e-06 55.1 63 54.0
Sed0026456 Sechium edule HOM05D000156 ORTHO05D001290 3.0e-06 55.1 71 43.7
Prupe.1G409900 Prunus persica HOM05D000156 ORTHO05D001290 3.9e-06 54.7 72 48.6
Ca_15822_v3 Cicer arietinum L. HOM05D000156 ORTHO05D001290 5.1e-06 54.3 62 54.8
Ca_15856_v3 Cicer arietinum L. HOM05D000156 ORTHO05D001290 5.1e-06 54.3 62 54.8
Cc08_g10830 Coffea canephora HOM05D000156 ORTHO05D001290 5.1e-06 54.3 65 56.9
FvH4_2g31650 Fragaria vesca HOM05D000156 ORTHO05D001290 5.1e-06 54.3 72 48.6
FAN15G1479 Fragaria x ananassa HOM05D000156 ORTHO05D001290 5.1e-06 54.3 72 48.6
FAN24G0225 Fragaria x ananassa HOM05D000156 ORTHO05D001290 5.1e-06 54.3 72 48.6
FAN27G3499 Fragaria x ananassa HOM05D000156 ORTHO05D001290 5.1e-06 54.3 62 53.2
RcHm_v2.0_Chr6g0311171 Rosa chinensis HOM05D000156 ORTHO05D001290 5.1e-06 54.3 72 48.6
Medtr3g104570 Medicago truncatula HOM05D000156 ORTHO05D001290 6.6e-06 53.9 62 54.8
Phvul.009G078500 Phaseolus vulgaris HOM05D000156 ORTHO05D001290 6.6e-06 53.9 64 57.8
Duzib187G0968 Durio zibethinus HOM05D000156 ORTHO05D001290 8.6e-06 53.5 77 49.4
VMungo1309G3124 Vigna mungo HOM05D000156 ORTHO05D001290 8.6e-06 53.5 64 57.8


User provided reference genes

Program Settings