Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3106 Trochodendron aralioides HOM05D002451 ORTHO05D007901 5.3e-81 304.3 152 100.0
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 5.5e-22 108.2 57 84.2
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 4.7e-21 105.1 55 87.3
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 4.4e-19 98.6 115 50.4
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 5.7e-19 98.2 74 64.9
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 2.2e-18 96.3 55 81.8
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 1.8e-17 93.2 56 75.0
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 2.4e-17 92.8 48 85.4
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 2.4e-17 92.8 56 75.0
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 3.1e-17 92.4 52 78.8
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 4.1e-17 92.0 60 71.7
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 4.1e-17 92.0 52 75.0
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 7.0e-17 91.3 56 71.4
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 9.2e-17 90.9 56 71.4
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 9.2e-17 90.9 56 71.4
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 1.6e-16 90.1 88 59.1
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 1.6e-16 90.1 67 65.7
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 2.0e-16 89.7 65 63.1
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 2.0e-16 89.7 48 81.2
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 2.7e-16 89.4 73 61.6
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 2.7e-16 89.4 53 73.6
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 3.5e-16 89.0 66 63.6
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 4.5e-16 88.6 58 69.0
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 4.5e-16 88.6 81 59.3
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 5.9e-16 88.2 48 81.2
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 5.9e-16 88.2 78 61.5
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 5.9e-16 88.2 69 63.8
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 1.0e-15 87.4 58 69.0
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 1.7e-15 86.7 52 73.1
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 1.7e-15 86.7 52 73.1
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 1.7e-15 86.7 60 66.7
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 1.7e-15 86.7 73 61.6
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 1.7e-15 86.7 46 82.6
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 1.7e-15 86.7 56 69.6
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 2.3e-15 86.3 50 78.0
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 2.9e-15 85.9 55 69.1
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.8e-15 85.5 53 71.7
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.8e-15 85.5 53 71.7
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.8e-15 85.5 53 71.7
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.8e-15 85.5 53 71.7
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.8e-15 85.5 53 71.7
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 5.0e-15 85.1 56 66.1
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 5.0e-15 85.1 47 78.7
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 5.0e-15 85.1 52 73.1
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 6.6e-15 84.7 91 52.7
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 8.6e-15 84.3 69 60.9
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 1.1e-14 84.0 53 69.8
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 1.1e-14 84.0 70 60.0
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 1.1e-14 84.0 44 81.8
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 1.5e-14 83.6 70 60.0
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 1.5e-14 83.6 48 77.1
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 1.9e-14 83.2 76 56.6
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 1.9e-14 83.2 44 79.5
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 1.9e-14 83.2 53 67.9
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 1.9e-14 83.2 47 78.7
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 1.9e-14 83.2 47 78.7
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 2.5e-14 82.8 68 60.3
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 2.5e-14 82.8 93 51.6
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 2.5e-14 82.8 52 71.2
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 2.5e-14 82.8 45 77.8
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 3.3e-14 82.4 89 48.3
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 3.3e-14 82.4 44 81.8
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 4.3e-14 82.0 61 60.7
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 5.6e-14 81.6 51 68.6
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 9.5e-14 80.9 46 69.6
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 9.5e-14 80.9 44 77.3
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 9.5e-14 80.9 43 81.4
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 9.5e-14 80.9 44 79.5
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 1.2e-13 80.5 46 67.4
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 1.2e-13 80.5 92 44.6
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 1.2e-13 80.5 55 65.5
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 1.6e-13 80.1 46 69.6
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 1.6e-13 80.1 44 77.3
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.6e-13 80.1 46 69.6
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.6e-13 80.1 46 69.6
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 1.6e-13 80.1 44 77.3
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 2.8e-13 79.3 47 72.3
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 2.8e-13 79.3 71 56.3
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 3.6e-13 79.0 64 60.9
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 6.1e-13 78.2 44 75.0
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 6.1e-13 78.2 47 72.3
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 8.0e-13 77.8 46 67.4
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 8.0e-13 77.8 46 67.4
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 8.0e-13 77.8 46 67.4
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 8.0e-13 77.8 44 75.0
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 8.0e-13 77.8 69 56.5
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 8.0e-13 77.8 42 81.0
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 1.0e-12 77.4 46 65.2
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 1.0e-12 77.4 44 77.3
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 1.4e-12 77.0 46 67.4
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 1.8e-12 76.6 46 65.2
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 2.3e-12 76.3 51 60.8
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 5.2e-12 75.1 54 63.0
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 6.8e-12 74.7 60 55.0
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 1.2e-11 73.9 41 73.2
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 1.2e-11 73.9 38 86.8
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 1.2e-11 73.9 61 62.3
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 4.4e-11 72.0 41 78.0
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 7.5e-11 71.2 44 63.6
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 9.8e-11 70.9 73 52.1
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 2.2e-10 69.7 41 68.3
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 3.7e-10 68.9 35 77.1
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 1.8e-09 66.6 34 85.3
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 1.2e-08 63.9 41 63.4
COL.COLO4_28348 Corchorus olitorius HOM05D002451 ORTHO05D007901 1.1e-06 57.4 36 69.4
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 7.3e-06 54.7 42 54.8


User provided reference genes

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