Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1867 Trochodendron aralioides HOM05D001888 ORTHO05D001842 6.7e-73 277.3 147 100.0
TAR636G2336 Trochodendron aralioides HOM05D001888 ORTHO05D001842 4.0e-33 145.2 80 95.0
GSVIVG01028978001 Vitis vinifera HOM05D001888 ORTHO05D001842 9.5e-19 97.4 80 63.8
TAR374G1672 Trochodendron aralioides HOM05D001888 ORTHO05D001842 1.6e-18 96.7 80 66.2
TAR367G0006 Trochodendron aralioides HOM05D001888 ORTHO05D001842 3.6e-18 95.5 80 62.5
TAR375G1033 Trochodendron aralioides HOM05D001888 ORTHO05D001842 3.6e-18 95.5 80 62.5
Dinv37661 Davidia involucrata HOM05D001888 ORTHO05D001842 2.2e-15 86.3 80 61.2
Nn1g01461 Nelumbo nucifera HOM05D001888 ORTHO05D001842 1.1e-14 84.0 77 59.7
Actinidia31819 Actinidia chinensis HOM05D001888 ORTHO05D001842 3.1e-14 82.4 80 58.8
Actinidia03120 Actinidia chinensis HOM05D001888 ORTHO05D001842 7.0e-14 81.3 80 57.5
Hma1.2p1_1943F.1_g308520 Hydrangea macrophylla HOM05D001888 ORTHO05D001842 1.2e-13 80.5 80 56.2
Atru.chr1.459 Acer truncatum HOM05D001888 ORTHO05D001842 5.9e-13 78.2 69 60.9
Dinv38962 Davidia involucrata HOM05D001888 ORTHO05D001842 7.8e-13 77.8 80 56.2
Prupe.2G294200 Prunus persica HOM05D001888 ORTHO05D001842 1.0e-12 77.4 62 62.9
MBI17_g39342_MAGBIO Magnolia biondii HOM05D001888 ORTHO05D001842 1.7e-12 76.6 77 57.1
MBI17_g46330_MAGBIO Magnolia biondii HOM05D001888 ORTHO05D001842 1.7e-12 76.6 77 57.1
Nn6g33502 Nelumbo nucifera HOM05D001888 ORTHO05D001842 1.7e-12 76.6 78 59.0
Haze_08882 Corylus avellana HOM05D001888 ORTHO05D001842 3.8e-12 75.5 100 48.0
QL12p018168 Quercus lobata HOM05D001888 ORTHO05D001842 2.5e-11 72.8 81 55.6
Potri.012G141200 Populus trichocarpa HOM05D001888 ORTHO05D001842 4.3e-11 72.0 73 54.8
Rhsim09G0197700 Rhododendron simsii HOM05D001888 ORTHO05D001842 5.6e-11 71.6 71 56.3
Potri.015G143800 Populus trichocarpa HOM05D001888 ORTHO05D001842 7.3e-11 71.2 67 59.7
Ciclev10004257m.g Citrus clementina HOM05D001888 ORTHO05D001842 9.5e-11 70.9 58 62.1
CiPaw.12G095000 Carya illinoinensis HOM05D001888 ORTHO05D001842 1.2e-10 70.5 80 52.5
Lj2A188T36 Lonicera japonica HOM05D001888 ORTHO05D001842 2.1e-10 69.7 78 51.3
Lj8C25T5 Lonicera japonica HOM05D001888 ORTHO05D001842 2.1e-10 69.7 64 57.8
Haze_13713 Corylus avellana HOM05D001888 ORTHO05D001842 2.8e-10 69.3 80 55.0
Sabra15G0153500 Salix brachista HOM05D001888 ORTHO05D001842 4.7e-10 68.6 67 55.2
Sabra15G0154700 Salix brachista HOM05D001888 ORTHO05D001842 4.7e-10 68.6 67 55.2
Cfa008318 Carpinus fangiana HOM05D001888 ORTHO05D001842 6.1e-10 68.2 80 53.8
Dinv35212 Davidia involucrata HOM05D001888 ORTHO05D001842 6.1e-10 68.2 62 66.1
CSS0014564 Camellia sinensis var. sinensis HOM05D001888 ORTHO05D001842 8.0e-10 67.8 42 83.3
CSS0016128 Camellia sinensis var. sinensis HOM05D001888 ORTHO05D001842 8.0e-10 67.8 42 83.3
Thecc.03G176500 Theobroma cacao HOM05D001888 ORTHO05D001842 8.0e-10 67.8 64 59.4
QL09p014226 Quercus lobata HOM05D001888 ORTHO05D001842 1.4e-09 67.0 71 56.3
TWI81G0663 Tripterygium wilfordii HOM05D001888 ORTHO05D001842 1.4e-09 67.0 82 51.2
vmacro13947 Vaccinium macrocarpon HOM05D001888 ORTHO05D001842 1.4e-09 67.0 66 57.6
arahy.Tifrunner.gnm1.ann1.SEEZ4U Arachis hypogaea HOM05D001888 ORTHO05D001842 2.3e-09 66.2 80 47.5
Thecc.03G275900 Theobroma cacao HOM05D001888 ORTHO05D001842 2.3e-09 66.2 78 55.1
Rhsim07G0091800 Rhododendron simsii HOM05D001888 ORTHO05D001842 3.1e-09 65.9 67 55.2
GSVIVG01019782001 Vitis vinifera HOM05D001888 ORTHO05D001842 3.1e-09 65.9 80 48.8
CiPaw.04G070900 Carya illinoinensis HOM05D001888 ORTHO05D001842 4.0e-09 65.5 71 52.1
Lj2g0025321 Lotus japonicus HOM05D001888 ORTHO05D001842 5.2e-09 65.1 80 48.8
Potri.003G124600 Populus trichocarpa HOM05D001888 ORTHO05D001842 6.8e-09 64.7 71 52.1
CSS0022417 Camellia sinensis var. sinensis HOM05D001888 ORTHO05D001842 1.2e-08 63.9 80 50.0
DCAR_004646 Daucus carota HOM05D000683 ORTHO05D001842 1.2e-08 63.9 75 49.3
vmacro09838 Vaccinium macrocarpon HOM05D001888 ORTHO05D001842 1.5e-08 63.5 72 56.9
Manes.02G023900 Manihot esculenta HOM05D001888 ORTHO05D001842 2.0e-08 63.2 80 48.8
DCAR_006748 Daucus carota HOM05D001888 ORTHO05D001842 2.6e-08 62.8 61 60.7
Prupe.5G096300 Prunus persica HOM05D001888 ORTHO05D001842 2.6e-08 62.8 81 49.4
arahy.Tifrunner.gnm1.ann1.2U7QKV Arachis hypogaea HOM05D001888 ORTHO05D001842 3.4e-08 62.4 80 47.5
Ca_24560_v3 Cicer arietinum L. HOM05D001888 ORTHO05D001842 3.4e-08 62.4 60 58.3
Rhsim02G0225900 Rhododendron simsii HOM05D001888 ORTHO05D001842 4.4e-08 62.0 63 54.0
Lj5g0008064 Lotus japonicus HOM05D001888 ORTHO05D001842 5.8e-08 61.6 80 50.0
TWI14G0864 Tripterygium wilfordii HOM05D001888 ORTHO05D001842 5.8e-08 61.6 67 56.7
Phvul.002G287700 Phaseolus vulgaris HOM05D001888 ORTHO05D001842 7.5e-08 61.2 74 48.6
PGR042G3805 Punica granatum HOM05D001888 ORTHO05D001842 7.5e-08 61.2 79 45.6
Sopen08g003850 Solanum pennellii HOM05D001888 ORTHO05D001842 9.8e-08 60.8 72 51.4
TWI60G0760 Tripterygium wilfordii HOM05D001888 ORTHO05D001842 9.8e-08 60.8 80 45.0
Aqoxy7G00360 Aquilegia oxysepala HOM05D001888 ORTHO05D001842 1.3e-07 60.5 77 50.6
CSS0033349 Camellia sinensis var. sinensis HOM05D001888 ORTHO05D001842 1.3e-07 60.5 64 57.8
Gohir.D08G199200 Gossypium hirsutum HOM05D001888 ORTHO05D001842 1.3e-07 60.5 68 52.9
Gorai.004G210000 Gossypium raimondii HOM05D001888 ORTHO05D001842 1.3e-07 60.5 68 52.9
THA.LOC104809399 Tarenaya hassleriana HOM05D001888 ORTHO05D001842 1.3e-07 60.5 52 61.5
Actinidia27391 Actinidia chinensis HOM05D001888 ORTHO05D001842 1.7e-07 60.1 63 58.7
CiPaw.11G138000 Carya illinoinensis HOM05D001888 ORTHO05D001842 1.7e-07 60.1 82 47.6
Glyma.05G206100 Glycine max HOM05D001888 ORTHO05D001842 1.7e-07 60.1 81 43.2
Glyma.08G013000 Glycine max HOM05D001888 ORTHO05D001842 1.7e-07 60.1 55 54.5
DCAR_000600 Daucus carota HOM05D001888 ORTHO05D001842 2.2e-07 59.7 80 43.8
Gohir.A08G180400 Gossypium hirsutum HOM05D001888 ORTHO05D001842 2.9e-07 59.3 68 52.9
RcHm_v2.0_Chr1g0377241 Rosa chinensis HOM05D001888 ORTHO05D001842 2.9e-07 59.3 67 52.2
MSTRG.13835 Avicennia marina HOM05D001888 ORTHO05D001842 3.7e-07 58.9 45 71.1
ClCG09G012940 Citrullus lanatus HOM05D001888 ORTHO05D001842 3.7e-07 58.9 55 58.2
CsaV3_3G049930 Cucumis sativus L. HOM05D001888 ORTHO05D001842 3.7e-07 58.9 55 58.2
Manes.06G147000 Manihot esculenta HOM05D001888 ORTHO05D001842 3.7e-07 58.9 54 59.3
Solyc08g007970.3 Solanum lycopersicum HOM05D001888 ORTHO05D001842 3.7e-07 58.9 72 50.0
CAN.G792.86 Capsicum annuum HOM05D001888 ORTHO05D001842 4.9e-07 58.5 80 45.0
Lalb_Chr03g0034551 Lupinus albus HOM05D001888 ORTHO05D001842 4.9e-07 58.5 78 44.9
Potri.001G106700 Populus trichocarpa HOM05D001888 ORTHO05D001842 4.9e-07 58.5 101 43.6
Sabra03G0088100 Salix brachista HOM05D001888 ORTHO05D001842 4.9e-07 58.5 74 48.6
Ciclev10018577m.g Citrus clementina HOM05D001888 ORTHO05D001842 6.4e-07 58.2 80 40.0
COL.COLO4_14308 Corchorus olitorius HOM05D001888 ORTHO05D001842 6.4e-07 58.2 55 56.4
MELO3C005655.2 Cucumis melo HOM05D001888 ORTHO05D001842 6.4e-07 58.2 66 51.5
Duzib068G0855 Durio zibethinus HOM05D001888 ORTHO05D001842 8.3e-07 57.8 78 48.7
Glyma.01G218100 Glycine max HOM05D001888 ORTHO05D001842 8.3e-07 57.8 68 51.5
Medtr1g100633 Medicago truncatula HOM05D001888 ORTHO05D001842 8.3e-07 57.8 50 64.0
PGSC0003DMG400005777 Solanum tuberosum HOM05D001888 ORTHO05D001842 8.3e-07 57.8 66 54.5
THA.LOC104811980 Tarenaya hassleriana HOM05D001888 ORTHO05D001842 8.3e-07 57.8 58 55.2
Cpa.g.sc107.51 Carica papaya HOM05D001888 ORTHO05D001842 1.1e-06 57.4 53 60.4
CsaV3_4G006030 Cucumis sativus L. HOM05D001888 ORTHO05D001842 1.4e-06 57.0 43 69.8
FAN01G2611 Fragaria x ananassa HOM05D001888 ORTHO05D001842 1.4e-06 57.0 67 50.7
Lalb_Chr06g0161141 Lupinus albus HOM05D001888 ORTHO05D001842 1.4e-06 57.0 80 51.2
PSO478G0138 Papaver somniferum HOM05D001888 ORTHO05D001842 1.4e-06 57.0 95 44.2
TPR.G14340 Trifolium pratense HOM05D001888 ORTHO05D001842 1.4e-06 57.0 44 70.5
VMungo0251G0235 Vigna mungo HOM05D001888 ORTHO05D001842 1.4e-06 57.0 72 48.6
MSTRG.11997 Avicennia marina HOM05D001888 ORTHO05D001842 1.9e-06 56.6 96 43.8
FvH4_7g29461 Fragaria vesca HOM05D001888 ORTHO05D001842 1.9e-06 56.6 67 50.7
FAN03G2051 Fragaria x ananassa HOM05D001888 ORTHO05D001842 1.9e-06 56.6 67 50.7
FAN03G2448 Fragaria x ananassa HOM05D001888 ORTHO05D001842 1.9e-06 56.6 67 50.7
FAN06G3714 Fragaria x ananassa HOM05D001888 ORTHO05D001842 1.9e-06 56.6 67 50.7
FAN10G2881 Fragaria x ananassa HOM05D001888 ORTHO05D001842 1.9e-06 56.6 67 50.7
EL10Ac3g05644 Beta vulgaris HOM05D001888 ORTHO05D001842 2.4e-06 56.2 79 45.6
AUR62017256 Chenopodium quinoa HOM05D001888 ORTHO05D001842 2.4e-06 56.2 80 43.8
MELO3C003323.2 Cucumis melo HOM05D001888 ORTHO05D001842 2.4e-06 56.2 81 48.1
MD14G1099400 Malus domestica HOM05D001888 ORTHO05D001842 2.4e-06 56.2 60 58.3
Cpa.g.sc202.4 Carica papaya HOM05D001888 ORTHO05D001842 3.2e-06 55.8 60 55.0
MELO3C016346.2 Cucumis melo HOM05D001888 ORTHO05D001842 3.2e-06 55.8 61 54.1
Actinidia05215 Actinidia chinensis HOM05D001888 ORTHO05D001842 4.1e-06 55.5 61 54.1
AUR62010611 Chenopodium quinoa HOM05D001888 ORTHO05D001842 4.1e-06 55.5 80 45.0
FAN04G2882 Fragaria x ananassa HOM05D001888 ORTHO05D001842 4.1e-06 55.5 51 62.7
CsaV3_5G002990 Cucumis sativus L. HOM05D001888 ORTHO05D001842 5.4e-06 55.1 78 44.9
Ah.07g207220 Amaranthus hybridus HOM05D001888 ORTHO05D001842 7.0e-06 54.7 59 50.8
CANSAT21G1127 Cannabis sativa HOM05D001888 ORTHO05D001842 7.0e-06 54.7 46 63.0
Carub.0007s3433 Capsella rubella HOM05D001888 ORTHO05D001842 7.0e-06 54.7 40 70.0
FAN08G2193 Fragaria x ananassa HOM05D001888 ORTHO05D001842 7.0e-06 54.7 51 60.8
Gohir.A12G257900 Gossypium hirsutum HOM05D001888 ORTHO05D001842 7.0e-06 54.7 51 58.8
Gohir.D12G259300 Gossypium hirsutum HOM05D001888 ORTHO05D001842 7.0e-06 54.7 43 67.4
HanXRQChr15g0495551 Helianthus annuus HOM05D001888 ORTHO05D001842 7.0e-06 54.7 62 48.4
Lalb_Chr02g0141031 Lupinus albus HOM05D001888 ORTHO05D001842 7.0e-06 54.7 78 50.0
Psat7g035000 Pisum sativum HOM05D001888 ORTHO05D001842 7.0e-06 54.7 81 42.0
Ah.12g057230 Amaranthus hybridus HOM05D001888 ORTHO05D001842 9.2e-06 54.3 69 49.3
ClCG07G008010 Citrullus lanatus HOM05D001888 ORTHO05D001842 9.2e-06 54.3 61 54.1
FAN06G3307 Fragaria x ananassa HOM05D001888 ORTHO05D001842 9.2e-06 54.3 67 49.3
Gohir.A03G015600 Gossypium hirsutum HOM05D001888 ORTHO05D001842 9.2e-06 54.3 63 50.8
Nitab4.5_0001356g0050 Nicotiana tabacum HOM05D001888 ORTHO05D001842 9.2e-06 54.3 75 49.3
Nitab4.5_0009681g0020 Nicotiana tabacum HOM05D001888 ORTHO05D001842 9.2e-06 54.3 36 75.0
Sc07g0009660 Simmondsia chinensis HOM05D001888 ORTHO05D001842 9.2e-06 54.3 61 50.8


User provided reference genes

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