Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1387 Trochodendron aralioides HOM05D005343 ORTHO05D007153 5.0e-163 577.8 310 100.0
CSS0002854 Camellia sinensis var. sinensis HOM05D005343 ORTHO05D007153 6.8e-67 258.5 139 91.4
Actinidia29218 Actinidia chinensis HOM05D005343 ORTHO05D007153 7.5e-66 255.0 139 89.2
CiPaw.01G284500 Carya illinoinensis HOM05D005343 ORTHO05D007153 7.5e-66 255.0 139 88.5
GSVIVG01016575001 Vitis vinifera HOM05D005343 ORTHO05D007153 1.7e-65 253.8 138 89.1
Dinv25995 Davidia involucrata HOM05D005343 ORTHO05D007153 4.8e-65 252.3 139 89.2
Rhsim09G0164800 Rhododendron simsii HOM05D005343 ORTHO05D007153 6.3e-65 251.9 138 89.1
Nn7g38223 Nelumbo nucifera HOM05D005343 ORTHO05D007153 1.4e-64 250.8 139 87.8
QL08p059100 Quercus lobata HOM05D005343 ORTHO05D007153 1.4e-64 250.8 139 86.3
Lj8A86G38 Lonicera japonica HOM05D005343 ORTHO05D007153 1.8e-64 250.4 139 87.1
Cfa001500 Carpinus fangiana HOM05D005343 ORTHO05D007153 2.4e-64 250.0 139 87.1
Prupe.2G232400 Prunus persica HOM05D005343 ORTHO05D007153 2.4e-64 250.0 139 87.1
THA.LOC104807113 Tarenaya hassleriana HOM05D005343 ORTHO05D007153 5.4e-64 248.8 138 88.4
MD01G1125100 Malus domestica HOM05D005343 ORTHO05D007153 7.0e-64 248.4 139 86.3
TPR.G14011 Trifolium pratense HOM05D005343 ORTHO05D007153 7.0e-64 248.4 161 79.5
COL.COLO4_14979 Corchorus olitorius HOM05D005343 ORTHO05D007153 9.1e-64 248.1 139 84.9
Gorai.011G256000 Gossypium raimondii HOM05D005343 ORTHO05D007153 1.2e-63 247.7 139 84.9
Thecc.10G046300 Theobroma cacao HOM05D005343 ORTHO05D007153 1.2e-63 247.7 139 84.9
Cpa.g.sc1.387 Carica papaya HOM05D005343 ORTHO05D007153 1.6e-63 247.3 139 86.3
Gohir.D10G225000 Gossypium hirsutum HOM05D005343 ORTHO05D007153 1.6e-63 247.3 139 84.9
Nitab4.5_0001831g0140 Nicotiana tabacum HOM05D005343 ORTHO05D007153 1.6e-63 247.3 138 86.2
Oeu059403.2 Olea europaea HOM05D005343 ORTHO05D007153 2.0e-63 246.9 138 86.2
arahy.Tifrunner.gnm1.ann1.23BIS9 Arachis hypogaea HOM05D005343 ORTHO05D007153 3.5e-63 246.1 139 85.6
arahy.Tifrunner.gnm1.ann1.VWL0PE Arachis hypogaea HOM05D005343 ORTHO05D007153 3.5e-63 246.1 139 85.6
ECA232G2382 Erigeron canadensis HOM05D005343 ORTHO05D007153 3.5e-63 246.1 139 85.6
FvH4_6g51210 Fragaria vesca HOM05D005343 ORTHO05D007153 3.5e-63 246.1 139 84.2
FAN02G3866 Fragaria x ananassa HOM05D005343 ORTHO05D007153 3.5e-63 246.1 139 84.2
FAN09G3765 Fragaria x ananassa HOM05D005343 ORTHO05D007153 3.5e-63 246.1 139 84.2
FAN14G3830 Fragaria x ananassa HOM05D005343 ORTHO05D007153 3.5e-63 246.1 139 84.2
RcHm_v2.0_Chr3g0483011 Rosa chinensis HOM05D005343 ORTHO05D007153 3.5e-63 246.1 139 84.9
Carub.0005s2211 Capsella rubella HOM05D005343 ORTHO05D007153 4.5e-63 245.7 138 87.0
Glyma.10G289600 Glycine max HOM05D005343 ORTHO05D007153 4.5e-63 245.7 139 85.6
PGR142G2259 Punica granatum HOM05D005343 ORTHO05D007153 5.9e-63 245.4 139 84.9
AT3G55400 Arabidopsis thaliana HOM05D005343 ORTHO05D007153 7.7e-63 245.0 138 86.2
BcaB01g00104 Brassica carinata HOM05D005343 ORTHO05D007153 7.7e-63 245.0 138 86.2
C08p30620 Brassica napus HOM05D005343 ORTHO05D007153 7.7e-63 245.0 138 86.2
BolC8t50678H Brassica oleracea HOM05D005343 ORTHO05D007153 7.7e-63 245.0 138 86.2
CARHR165410 Cardamine hirsuta HOM05D005343 ORTHO05D007153 7.7e-63 245.0 138 86.2
HanXRQChr09g0247741 Helianthus annuus HOM05D005343 ORTHO05D007153 7.7e-63 245.0 139 86.3
A09p48330 Brassica napus HOM05D005343 ORTHO05D007153 1.0e-62 244.6 138 85.5
BraA09t40285Z Brassica rapa HOM05D005343 ORTHO05D007153 1.0e-62 244.6 138 85.5
Ca_11289_v3 Cicer arietinum L. HOM05D005343 ORTHO05D007153 1.0e-62 244.6 160 78.1
Haze_17041 Corylus avellana HOM05D005343 ORTHO05D007153 1.0e-62 244.6 133 88.0
Sp5g07070 Schrenkiella parvula HOM05D005343 ORTHO05D007153 1.0e-62 244.6 138 86.2
Aqoxy4G02977 Aquilegia oxysepala HOM05D005343 ORTHO05D007153 1.3e-62 244.2 167 76.0
BcaC07g39858 Brassica carinata HOM05D005343 ORTHO05D007153 1.3e-62 244.2 138 85.5
FvH4_6g24170 Fragaria vesca HOM05D005343 ORTHO05D007153 1.3e-62 244.2 139 83.5
Gohir.A10G216000 Gossypium hirsutum HOM05D005343 ORTHO05D007153 1.3e-62 244.2 139 84.2
Lj5g0009366 Lotus japonicus HOM05D005343 ORTHO05D007153 1.3e-62 244.2 139 85.6
MD07G1194800 Malus domestica HOM05D005343 ORTHO05D007153 1.3e-62 244.2 139 84.9
Medtr1g115295 Medicago truncatula HOM05D005343 ORTHO05D007153 1.3e-62 244.2 158 78.5
Nitab4.5_0006342g0040 Nicotiana tabacum HOM05D005343 ORTHO05D007153 1.3e-62 244.2 139 84.9
PSO384G0408 Papaver somniferum HOM05D005343 ORTHO05D007153 1.3e-62 244.2 138 87.0
HPP92_007845 Vanilla planifolia HOM05D005343 ORTHO05D007153 1.3e-62 244.2 139 84.2
Thhalv10010210m.g Eutrema salsugineum HOM05D005343 ORTHO05D007153 2.3e-62 243.4 138 86.2
Potri.010G207300 Populus trichocarpa HOM05D005343 ORTHO05D007153 2.3e-62 243.4 139 83.5
Duzib114G0552 Durio zibethinus HOM05D005343 ORTHO05D007153 3.8e-62 242.7 133 88.0
CANSAT56G3579 Cannabis sativa HOM05D005343 ORTHO05D007153 5.0e-62 242.3 151 79.5
Manes.10G032600 Manihot esculenta HOM05D005343 ORTHO05D007153 5.0e-62 242.3 139 83.5
Solyc05g054600.3 Solanum lycopersicum HOM05D005343 ORTHO05D007153 5.0e-62 242.3 139 84.2
Sopen05g033080 Solanum pennellii HOM05D005343 ORTHO05D007153 5.0e-62 242.3 139 84.2
A04p04540 Brassica napus HOM05D005343 ORTHO05D007153 6.5e-62 241.9 138 84.8
CANSAT56G3076 Cannabis sativa HOM05D005343 ORTHO05D007153 6.5e-62 241.9 151 79.5
PSO339G4546 Papaver somniferum HOM05D005343 ORTHO05D007153 6.5e-62 241.9 138 86.2
Aa31LG10G10420 Aethionema arabicum HOM05D005343 ORTHO05D007153 8.6e-62 241.5 138 83.3
AL5G36550 Arabidopsis lyrata HOM05D005343 ORTHO05D007153 8.6e-62 241.5 138 84.8
Sabra10G0160100 Salix brachista HOM05D005343 ORTHO05D007153 8.6e-62 241.5 139 83.5
CDE04G3770 Ceratophyllum demersum HOM05D005343 ORTHO05D007153 1.1e-61 241.1 139 82.0
Glyma.20G099600 Glycine max HOM05D005343 ORTHO05D007153 1.1e-61 241.1 139 84.2
Medtr1g018280 Medicago truncatula HOM05D005343 ORTHO05D007153 1.1e-61 241.1 164 74.4
BraA04t16165Z Brassica rapa HOM05D005343 ORTHO05D007153 1.5e-61 240.7 138 84.1
PSO541G2783 Papaver somniferum HOM05D005343 ORTHO05D007153 1.5e-61 240.7 135 87.4
VMungo0720G2355 Vigna mungo HOM05D005343 ORTHO05D007153 1.5e-61 240.7 161 75.8
Ciclev10030995m.g Citrus clementina HOM05D005343 ORTHO05D007153 1.9e-61 240.4 138 83.3
Lalb_Chr06g0164311 Lupinus albus HOM05D005343 ORTHO05D007153 2.5e-61 240.0 139 83.5
Atru.BG.276.p Acer truncatum HOM05D005343 ORTHO05D007153 3.3e-61 239.6 139 83.5
Eucgr.J00041 Eucalyptus grandis HOM05D005343 ORTHO05D007153 3.3e-61 239.6 139 83.5
ClCG09G020030 Citrullus lanatus HOM05D005343 ORTHO05D007153 4.2e-61 239.2 138 84.1
CsaV3_5G026430 Cucumis sativus L. HOM05D005343 ORTHO05D007153 4.2e-61 239.2 138 84.1
Phvul.007G011800 Phaseolus vulgaris HOM05D005343 ORTHO05D007153 4.2e-61 239.2 139 82.7
MELO3C025447.2 Cucumis melo HOM05D005343 ORTHO05D007153 5.5e-61 238.8 138 84.1
SGA_v2.0_scaffold165G38273 Striga asiatica HOM05D005343 ORTHO05D007153 5.5e-61 238.8 138 81.9
Migut.E01300 Erythranthe guttata HOM05D005343 ORTHO05D007153 7.2e-61 238.4 138 82.6
Psat6g236000 Pisum sativum HOM05D005343 ORTHO05D007153 7.2e-61 238.4 161 75.2
TWI63G0552 Tripterygium wilfordii HOM05D005343 ORTHO05D007153 7.2e-61 238.4 139 81.3
CAN.G1013.7 Capsicum annuum HOM05D005343 ORTHO05D007153 9.5e-61 238.0 139 82.7
Sc04g0005120 Simmondsia chinensis HOM05D005343 ORTHO05D007153 9.5e-61 238.0 139 82.7
SalBow2G3494 Salvia bowleyana HOM05D005343 ORTHO05D007153 1.2e-60 237.7 138 82.6
Cc02_g08110 Coffea canephora HOM05D005343 ORTHO05D007153 2.8e-60 236.5 138 83.3
Hma1.2p1_2133F.1_g314780 Hydrangea macrophylla HOM05D005343 ORTHO05D007153 2.8e-60 236.5 175 70.3
PGSC0003DMG400023422 Solanum tuberosum HOM05D005343 ORTHO05D007153 2.8e-60 236.5 139 83.5
Hund12544 Selenicereus undatus HOM05D005343 ORTHO05D007153 1.4e-59 234.2 139 80.6
ATR0730G097 Amborella trichopoda HOM05D005343 ORTHO05D007153 1.8e-59 233.8 139 80.6
Sed0015228 Sechium edule HOM05D005343 ORTHO05D007153 4.0e-59 232.6 136 83.1
EL10Ac2g03414 Beta vulgaris HOM05D005343 ORTHO05D007153 8.9e-59 231.5 136 83.1
AUR62040959 Chenopodium quinoa HOM05D005343 ORTHO05D007153 8.9e-59 231.5 136 83.1
Os03g0209600 Oryza sativa ssp. japonica HOM05D005343 ORTHO05D007153 2.0e-58 230.3 138 80.4
AUR62038368 Chenopodium quinoa HOM05D005343 ORTHO05D007153 3.4e-58 229.6 136 82.4
DCAR_015189 Daucus carota HOM05D005343 ORTHO05D007153 5.7e-58 228.8 138 80.4
Dinv31439 Davidia involucrata HOM05D005343 ORTHO05D007153 9.8e-58 228.0 126 90.5
FAN14G5877 Fragaria x ananassa HOM05D005343 ORTHO05D007153 1.3e-57 227.6 129 82.9
Lsat_1_v5_gn_9_65321 Lactuca sativa HOM05D005343 ORTHO05D007153 1.2e-55 221.1 133 81.2
Peaxi162Scf00015g01517 Petunia axillaris HOM05D005343 ORTHO05D007153 5.9e-55 218.8 168 67.3
FAN09G1140 Fragaria x ananassa HOM05D005343 ORTHO05D007153 8.6e-54 214.9 116 85.3
unitig_62.g23894 Utricularia gibba HOM05D005343 ORTHO05D007153 2.5e-53 213.4 144 71.5
Mapoly0109s0018 Marchantia polymorpha HOM05D005343 ORTHO05D007153 1.8e-51 207.2 122 78.7
SMO196G0053 Selaginella moellendorffii HOM05D005343 ORTHO05D007153 3.7e-49 199.5 138 68.1
Pp3c15_23530 Physcomitrium patens HOM05D005343 ORTHO05D007153 1.8e-48 197.2 139 65.5
BcaC02g09754 Brassica carinata HOM05D005343 ORTHO05D007153 4.7e-44 182.6 97 87.6
C04p36970 Brassica napus HOM05D005343 ORTHO05D007153 4.7e-44 182.6 97 87.6
BolC4t25262H Brassica oleracea HOM05D005343 ORTHO05D007153 4.7e-44 182.6 97 87.6
Zm00001eb007130 Zea mays HOM05D005343 ORTHO05D007153 4.7e-44 182.6 95 89.5
BcaB02g08424 Brassica carinata HOM05D005343 ORTHO05D007153 2.0e-42 177.2 102 86.3
PRCOL_00006366 Prasinoderma coloniale HOM05D005343 ORTHO05D007153 1.2e-39 167.9 136 60.3
Cpa.g.sc1.385 Carica papaya HOM05D005343 ORTHO05D007153 3.9e-38 162.9 142 63.4
CBR_g833 Chara braunii HOM05D005343 ORTHO05D007153 2.8e-36 156.8 96 72.9
Cre12.g487100 Chlamydomonas reinhardtii HOM05D005343 ORTHO05D007153 6.2e-36 155.6 134 56.7
SEGI_38333 Sequoiadendron giganteum HOM05D005343 ORTHO05D007153 8.9e-35 151.8 96 77.1
FAN09G1498 Fragaria x ananassa HOM05D005343 ORTHO05D007153 2.1e-31 140.6 84 81.0
RcHm_v2.0_Chr3g0482991 Rosa chinensis HOM05D005343 ORTHO05D007153 6.4e-25 119.0 68 86.8
Actinidia02894 Actinidia chinensis HOM05D005343 ORTHO05D008556 1.9e-24 117.5 86 73.3
MCO07G098 Micromonas commoda HOM05D005343 ORTHO05D007153 4.1e-24 116.3 110 47.3
Haze_27266 Corylus avellana HOM05D005343 ORTHO05D007153 3.6e-20 103.2 78 60.3
Pp3c12_10530 Physcomitrium patens HOM05D005343 ORTHO05D007153 1.9e-16 90.9 58 70.7
MCO01G351 Micromonas commoda HOM05D005343 ORTHO05D007153 1.1e-13 81.6 111 37.8
Cfa027124 Carpinus fangiana HOM05D003227 ORTHO05D007153 4.8e-12 76.3 129 31.0
TAR636G2167 Trochodendron aralioides HOM05D005343 ORTHO05D007153 2.6e-10 70.5 34 91.2
TAR636G2926 Trochodendron aralioides HOM05D005343 ORTHO05D007153 2.6e-10 70.5 34 91.2
AagrBONN_evm.TU.Sc2ySwM_228.5584 Anthoceros agrestis HOM05D005343 ORTHO05D007153 6.4e-09 65.9 34 82.4
BolC4t25263H Brassica oleracea HOM05D005343 ORTHO05D007153 8.4e-09 65.5 43 76.7
C04p36980 Brassica napus HOM05D005343 ORTHO05D007153 1.0e-06 58.5 38 76.3


User provided reference genes

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