Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 8.4e-67 256.9 133 100.0
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 8.4e-67 256.9 133 100.0
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.6e-57 226.1 131 88.5
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 1.7e-51 206.1 127 81.9
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 5.0e-51 204.5 127 82.7
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 5.1e-48 194.5 126 77.0
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 5.1e-48 194.5 132 76.5
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 3.3e-47 191.8 130 76.2
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 3.3e-47 191.8 124 76.6
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 3.3e-47 191.8 132 73.5
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 3.3e-47 191.8 132 73.5
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 5.7e-47 191.0 126 76.2
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 9.7e-47 190.3 130 73.8
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 2.2e-46 189.1 132 72.7
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 2.2e-46 189.1 124 74.2
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 2.8e-46 188.7 126 73.8
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 3.7e-46 188.3 126 73.0
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 4.8e-46 188.0 129 74.4
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 6.3e-46 187.6 129 72.1
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 1.1e-45 186.8 132 69.7
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 1.4e-45 186.4 126 76.2
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 1.8e-45 186.0 132 72.7
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.8e-45 186.0 132 72.7
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 1.8e-45 186.0 126 72.2
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 1.8e-45 186.0 132 72.0
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 1.8e-45 186.0 124 74.2
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 3.1e-45 185.3 132 69.7
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 5.3e-45 184.5 132 72.0
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.2e-44 183.3 132 72.0
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 2.0e-44 182.6 126 70.6
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 2.0e-44 182.6 131 67.9
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 7.7e-44 180.6 132 70.5
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 7.7e-44 180.6 126 72.2
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 1.0e-43 180.3 124 72.6
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 1.3e-43 179.9 124 70.2
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 2.2e-43 179.1 144 66.0
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 2.2e-43 179.1 120 73.3
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 2.9e-43 178.7 131 66.4
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 6.5e-43 177.6 122 73.8
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 6.5e-43 177.6 125 68.8
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 8.5e-43 177.2 130 66.9
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 8.5e-43 177.2 131 65.6
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 1.1e-42 176.8 122 73.8
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 1.1e-42 176.8 125 72.0
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 1.9e-42 176.0 131 64.9
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 2.5e-42 175.6 127 73.2
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 3.2e-42 175.3 125 68.8
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 4.2e-42 174.9 128 68.8
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 7.2e-42 174.1 129 66.7
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 7.2e-42 174.1 128 68.8
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 7.2e-42 174.1 129 68.2
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 1.2e-41 173.3 122 72.1
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 1.2e-41 173.3 125 68.0
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 1.6e-41 172.9 123 69.1
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 2.7e-41 172.2 126 64.3
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 2.7e-41 172.2 130 66.9
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 2.7e-41 172.2 126 69.0
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 3.6e-41 171.8 131 66.4
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 6.1e-41 171.0 122 68.9
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 1.0e-40 170.2 125 65.6
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 2.3e-40 169.1 125 65.6
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 2.3e-40 169.1 123 67.5
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 3.9e-40 168.3 126 68.3
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 5.2e-40 167.9 127 66.1
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 6.7e-40 167.5 125 64.8
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 8.8e-40 167.2 130 63.1
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 3.3e-39 165.2 126 64.3
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 7.4e-39 164.1 124 63.7
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 1.3e-38 163.3 126 64.3
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 1.7e-38 162.9 129 63.6
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 1.7e-38 162.9 124 66.1
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 2.2e-38 162.5 127 63.0
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 2.8e-38 162.2 130 62.3
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 3.7e-38 161.8 132 62.1
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 3.7e-38 161.8 132 62.9
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 4.8e-38 161.4 126 62.7
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 4.8e-38 161.4 122 65.6
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 4.8e-38 161.4 130 60.8
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 4.8e-38 161.4 124 65.3
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 6.3e-38 161.0 124 63.7
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 1.1e-37 160.2 125 62.4
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 1.1e-37 160.2 125 62.4
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 1.1e-37 160.2 125 62.4
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 1.1e-37 160.2 116 69.0
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 1.8e-37 159.5 118 66.9
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 2.4e-37 159.1 127 62.2
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 2.4e-37 159.1 116 68.1
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 4.1e-37 158.3 131 61.1
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 4.1e-37 158.3 124 62.9
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 4.1e-37 158.3 126 61.1
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 5.3e-37 157.9 126 61.1
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 7.0e-37 157.5 126 61.1
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 1.2e-36 156.8 126 60.3
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 1.6e-36 156.4 126 60.3
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 1.6e-36 156.4 126 60.3
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 2.0e-36 156.0 124 59.7
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 2.6e-36 155.6 123 61.8
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 3.5e-36 155.2 130 60.8
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 1.0e-35 153.7 116 67.2
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 2.9e-35 152.1 180 47.8
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 2.5e-34 149.1 114 64.9
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 2.7e-33 145.6 121 58.7
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 1.8e-32 142.9 105 65.7
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 2.8e-30 135.6 95 70.5
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 4.5e-28 128.3 115 55.7
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 1.1e-26 123.6 113 55.8
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 1.0e-24 117.1 117 51.3
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 2.6e-23 112.5 127 48.0
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 7.5e-23 110.9 75 70.7
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 4.2e-18 95.1 131 44.3
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 5.2e-16 88.2 64 67.2
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 6.8e-16 87.8 67 65.7
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 3.4e-15 85.5 166 36.7
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 2.2e-14 82.8 123 42.3
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 7.8e-12 74.3 74 50.0


User provided reference genes

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