Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0300 Trochodendron aralioides HOM05D005141 ORTHO05D006250 1.6e-244 849.0 432 100.0
TAR383G0458 Trochodendron aralioides HOM05D005141 ORTHO05D006250 2.2e-148 529.6 443 68.6
Nn2g11855 Nelumbo nucifera HOM05D005141 ORTHO05D006250 1.1e-144 517.3 445 64.5
TAR626G1320 Trochodendron aralioides HOM05D005141 ORTHO05D006250 1.5e-144 516.9 445 66.7
GSVIVG01035797001 Vitis vinifera HOM05D005141 ORTHO05D006250 1.1e-115 421.0 447 58.6
Dinv30204 Davidia involucrata HOM05D005141 ORTHO05D006250 3.0e-113 412.9 448 57.1
RcHm_v2.0_Chr6g0312851 Rosa chinensis HOM05D005141 ORTHO05D006250 1.3e-111 407.5 457 55.8
Prupe.1G467500 Prunus persica HOM05D005141 ORTHO05D006250 8.4e-108 394.8 422 56.9
MD15G1116100 Malus domestica HOM05D005141 ORTHO05D006250 1.4e-107 394.0 425 57.9
FAN27G2430 Fragaria x ananassa HOM05D005141 ORTHO05D006250 9.3e-107 391.3 457 53.8
MBI04_g39529_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 1.2e-106 391.0 436 56.2
FAN15G0409 Fragaria x ananassa HOM05D005141 ORTHO05D006250 2.7e-106 389.8 457 54.0
FAN20G1096 Fragaria x ananassa HOM05D005141 ORTHO05D006250 3.5e-106 389.4 456 53.9
Cfa021484 Carpinus fangiana HOM05D005141 ORTHO05D006250 1.8e-105 387.1 417 57.1
Haze_21614 Corylus avellana HOM05D005141 ORTHO05D006250 5.1e-105 385.6 382 59.9
Nn8g39307 Nelumbo nucifera HOM05D005141 ORTHO05D006250 1.1e-104 384.4 338 63.6
FAN24G3348 Fragaria x ananassa HOM05D005141 ORTHO05D006250 1.9e-104 383.6 457 53.8
TWI32G0021 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 2.5e-104 383.3 416 53.1
MD08G1137500 Malus domestica HOM05D005141 ORTHO05D006250 9.6e-104 381.3 424 57.3
QL12p031441 Quercus lobata HOM05D005141 ORTHO05D006250 4.8e-103 379.0 427 54.8
CiPaw.07G218200 Carya illinoinensis HOM05D005141 ORTHO05D006250 6.2e-103 378.6 453 53.6
Hma1.2p1_0175F.1_g077130 Hydrangea macrophylla HOM05D005141 ORTHO05D006250 1.3e-100 370.9 444 52.0
Manes.16G067800 Manihot esculenta HOM05D005141 ORTHO05D006250 3.8e-100 369.4 443 53.3
Manes.03G065500 Manihot esculenta HOM05D005141 ORTHO05D006250 2.1e-98 363.6 420 53.1
Potri.018G033700 Populus trichocarpa HOM05D005141 ORTHO05D006250 2.7e-98 363.2 419 54.2
CiPaw.08G014900 Carya illinoinensis HOM05D005141 ORTHO05D006250 3.5e-98 362.8 444 52.5
Thecc.09G145300 Theobroma cacao HOM05D005141 ORTHO05D006250 6.1e-98 362.1 430 54.4
Sabra18G0034600 Salix brachista HOM05D005141 ORTHO05D006250 7.9e-98 361.7 419 53.2
Eucgr.C01809 Eucalyptus grandis HOM05D005141 ORTHO05D006250 1.0e-97 361.3 388 57.5
PSO782G1260 Papaver somniferum HOM05D005141 ORTHO05D006250 3.0e-97 359.8 426 51.9
Glyma.04G071400 Glycine max HOM05D005141 ORTHO05D006250 1.1e-96 357.8 439 50.3
VMungo1309G3073 Vigna mungo HOM05D005141 ORTHO05D006250 1.5e-96 357.5 404 52.5
Glyma.06G072700 Glycine max HOM05D005141 ORTHO05D006250 2.5e-96 356.7 437 49.7
Lj7A714G44 Lonicera japonica HOM05D005141 ORTHO05D006250 2.2e-95 353.6 362 56.4
Phvul.009G097300 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 6.3e-95 352.1 438 50.0
TWI34G0135 Tripterygium wilfordii HOM05D005141 ORTHO05D006250 1.8e-94 350.5 350 57.4
Sabra06G0193700 Salix brachista HOM05D005141 ORTHO05D006250 2.6e-93 346.7 425 52.9
Actinidia13429 Actinidia chinensis HOM05D005141 ORTHO05D006250 1.0e-92 344.7 436 50.7
Atru.chr7.2334 Acer truncatum HOM05D005141 ORTHO05D006250 2.2e-92 343.6 428 50.9
CANSAT25G3062 Cannabis sativa HOM05D005141 ORTHO05D006250 2.5e-91 340.1 409 54.3
Ciclev10008356m.g Citrus clementina HOM05D005141 ORTHO05D006250 7.2e-91 338.6 422 52.4
Lj1g0018494 Lotus japonicus HOM05D005141 ORTHO05D006250 7.9e-90 335.1 438 48.4
Ca_15703_v3 Cicer arietinum L. HOM05D005141 ORTHO05D006250 1.8e-89 334.0 419 50.6
TPR.G34685 Trifolium pratense HOM05D005141 ORTHO05D006250 1.8e-89 334.0 395 52.7
Gorai.009G011200 Gossypium raimondii HOM05D005141 ORTHO05D006250 6.7e-89 332.0 425 51.1
Duzib187G0541 Durio zibethinus HOM05D005141 ORTHO05D006250 1.1e-88 331.3 416 51.2
Cc08_g08010 Coffea canephora HOM05D005141 ORTHO05D006250 2.0e-88 330.5 411 51.3
vmacro11124 Vaccinium macrocarpon HOM05D005141 ORTHO05D006250 3.7e-87 326.2 487 45.8
Medtr3g107950 Medicago truncatula HOM05D005141 ORTHO05D006250 1.4e-86 324.3 409 49.6
FvH4_2g30050 Fragaria vesca HOM05D005141 ORTHO05D006250 2.0e-85 320.5 342 57.0
Solyc06g065650.3 Solanum lycopersicum HOM05D005141 ORTHO05D006250 1.7e-84 317.4 415 50.8
Lalb_Chr23g0268881 Lupinus albus HOM05D005141 ORTHO05D006250 5.0e-84 315.8 394 50.8
Duzib150G1154 Durio zibethinus HOM05D005141 ORTHO05D006250 6.5e-84 315.5 451 47.7
Duzib168G0094 Durio zibethinus HOM05D005141 ORTHO05D006250 1.1e-83 314.7 453 47.7
MBI01_g37337_MAGBIO Magnolia biondii HOM05D005141 ORTHO05D006250 4.2e-83 312.8 334 57.8
Sopen06g024010 Solanum pennellii HOM05D005141 ORTHO05D006250 5.5e-83 312.4 415 50.1
Potri.006G247500 Populus trichocarpa HOM05D005141 ORTHO05D006250 7.2e-83 312.0 306 59.5
CAN.G199.28 Capsicum annuum HOM05D005141 ORTHO05D006250 9.4e-83 311.6 417 49.4
arahy.Tifrunner.gnm1.ann1.WUI646 Arachis hypogaea HOM05D005141 ORTHO05D006250 1.2e-82 311.2 384 50.0
PGSC0003DMG400026089 Solanum tuberosum HOM05D005141 ORTHO05D006250 2.7e-82 310.1 390 51.8
Rhsim02G0188600 Rhododendron simsii HOM05D005141 ORTHO05D006250 5.1e-81 305.8 323 54.8
Nitab4.5_0005873g0030 Nicotiana tabacum HOM05D005141 ORTHO05D006250 8.8e-81 305.1 382 50.0
PSO063G0687 Papaver somniferum HOM05D005141 ORTHO05D006250 4.4e-80 302.8 426 47.7
Nitab4.5_0011669g0010 Nicotiana tabacum HOM05D005141 ORTHO05D006250 6.3e-79 298.9 414 47.3
DCAR_022871 Daucus carota HOM05D005141 ORTHO05D006250 1.1e-78 298.1 442 45.5
ECA233G0036 Erigeron canadensis HOM05D005141 ORTHO05D006250 9.1e-78 295.0 408 46.3
HanXRQChr02g0050641 Helianthus annuus HOM05D005141 ORTHO05D006250 4.5e-77 292.7 363 50.1
arahy.Tifrunner.gnm1.ann1.29TRSQ Arachis hypogaea HOM05D005141 ORTHO05D006250 7.7e-77 292.0 420 45.2
Gohir.A05G010100 Gossypium hirsutum HOM05D005141 ORTHO05D006250 1.3e-76 291.2 425 47.3
Lalb_Chr08g0243831 Lupinus albus HOM05D005141 ORTHO05D006250 7.2e-75 285.4 403 47.1
Gohir.D05G010800 Gossypium hirsutum HOM05D005141 ORTHO05D006250 2.7e-74 283.5 423 47.3
Peaxi162Scf00545g00034 Petunia axillaris HOM05D005141 ORTHO05D006250 1.0e-73 281.6 462 42.9
ClCG08G012940 Citrullus lanatus HOM05D005141 ORTHO05D006250 3.0e-73 280.0 427 46.8
Cpa.g.sc91.20 Carica papaya HOM05D005141 ORTHO05D006250 3.3e-72 276.6 337 52.8
COL.COLO4_24046 Corchorus olitorius HOM05D005141 ORTHO05D006250 5.7e-72 275.8 298 57.7
Actinidia13280 Actinidia chinensis HOM05D005141 ORTHO05D006250 4.8e-71 272.7 280 56.4
SalBow4G0713 Salvia bowleyana HOM05D005141 ORTHO05D006250 2.1e-66 257.3 313 50.5
MSTRG.25868 Avicennia marina HOM05D005141 ORTHO05D006250 3.6e-66 256.5 371 45.8
Dinv11587 Davidia involucrata HOM05D005141 ORTHO05D006250 3.6e-66 256.5 271 56.1
Lsat_1_v5_gn_6_22941 Lactuca sativa HOM05D005141 ORTHO05D006250 8.0e-66 255.4 353 46.5
MELO3C011217.2 Cucumis melo HOM05D005141 ORTHO05D006250 1.0e-65 255.0 451 42.1
Oeu032487.3 Olea europaea HOM05D005141 ORTHO05D006250 1.8e-65 254.2 329 49.8
Oeu014659.3 Olea europaea HOM05D005141 ORTHO05D006250 8.8e-65 251.9 358 44.7
Sed0008448 Sechium edule HOM05D005141 ORTHO05D006250 8.8e-65 251.9 365 47.1
HanXRQChr13g0402161 Helianthus annuus HOM05D005141 ORTHO05D006250 1.5e-64 251.1 352 46.0
Sed0000645 Sechium edule HOM05D005141 ORTHO05D006250 1.7e-63 247.7 440 43.2
ATR0083G007 Amborella trichopoda HOM05D005141 ORTHO05D006250 2.2e-63 247.3 367 45.5
ClCG05G017130 Citrullus lanatus HOM05D005141 ORTHO05D006250 2.2e-63 247.3 420 43.1
PGR031G2456 Punica granatum HOM05D005141 ORTHO05D006250 9.1e-62 241.9 402 42.8
CsaV3_3G046630 Cucumis sativus L. HOM05D005141 ORTHO05D006250 2.7e-61 240.4 334 47.6
Aqoxy7G01897 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 5.9e-61 239.2 289 50.9
Lsat_1_v5_gn_1_43100 Lactuca sativa HOM05D005141 ORTHO05D006250 5.0e-60 236.1 351 45.6
MELO3C003675.2 Cucumis melo HOM05D005141 ORTHO05D006250 1.9e-59 234.2 340 47.1
Psat0s1782g0240 Pisum sativum HOM05D005141 ORTHO05D006250 3.6e-58 229.9 258 53.1
EL10Ac2g02550 Beta vulgaris HOM05D005141 ORTHO05D006250 2.0e-56 224.2 333 46.5
AUR62024850 Chenopodium quinoa HOM05D005141 ORTHO05D006250 4.9e-55 219.5 333 45.3
Phvul.001G055100 Phaseolus vulgaris HOM05D005141 ORTHO05D006250 1.2e-53 214.9 348 42.8
Migut.A00282 Erythranthe guttata HOM05D005141 ORTHO05D006250 3.3e-51 206.8 387 41.9
THA.LOC104803820 Tarenaya hassleriana HOM05D005141 ORTHO05D006250 5.9e-45 186.0 420 37.1
CsaV3_2G031660 Cucumis sativus L. HOM05D005141 ORTHO05D006250 1.9e-43 181.0 277 47.7
SGA_v2.0_scaffold27G11478 Striga asiatica HOM05D005141 ORTHO05D006250 1.8e-41 174.5 378 38.1
AL7G19190 Arabidopsis lyrata HOM05D005141 ORTHO05D006250 8.9e-41 172.2 402 36.8
Sp7g30350 Schrenkiella parvula HOM05D005141 ORTHO05D006250 1.5e-40 171.4 434 33.2
Carub.0007s0798 Capsella rubella HOM05D005141 ORTHO05D006250 5.8e-40 169.5 364 37.1
HPP92_009098 Vanilla planifolia HOM05D005141 ORTHO05D006250 2.2e-39 167.5 353 36.5
Thhalv10025562m.g Eutrema salsugineum HOM05D005141 ORTHO05D006250 2.9e-39 167.2 434 34.6
A08p18120 Brassica napus HOM05D005141 ORTHO05D006250 3.7e-39 166.8 379 33.8
BraA08t33764Z Brassica rapa HOM05D005141 ORTHO05D006250 6.4e-39 166.0 379 33.5
BcaC01g01013 Brassica carinata HOM05D005141 ORTHO05D006250 5.4e-38 162.9 378 35.7
AT4G32570 Arabidopsis thaliana HOM05D005141 ORTHO05D006250 1.6e-37 161.4 434 34.1
C03p87260 Brassica napus HOM05D005141 ORTHO05D006250 4.6e-37 159.8 437 33.2
BolC3t21027H Brassica oleracea HOM05D005141 ORTHO05D006250 6.0e-37 159.5 437 33.2
BcaB03g12752 Brassica carinata HOM05D005141 ORTHO05D006250 3.3e-35 153.7 422 31.8
Glyma.17G205200 Glycine max HOM05D005141 ORTHO05D006250 1.1e-33 148.7 193 46.6
Aa31LG4G11720 Aethionema arabicum HOM05D005141 ORTHO05D006250 5.2e-33 146.4 353 33.7
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 5.2e-33 146.4 284 37.7
C01p06380 Brassica napus HOM05D005141 ORTHO05D006250 6.8e-33 146.0 380 32.9
SHI18604 Sapria himalayana HOM05D005141 ORTHO05D006250 6.8e-33 146.0 273 36.6
A01p05810 Brassica napus HOM05D005141 ORTHO05D006250 4.4e-32 143.3 372 33.1
BraA01t00550Z Brassica rapa HOM05D005141 ORTHO05D006250 1.7e-31 141.4 380 32.1
BolC1t00634H Brassica oleracea HOM05D005141 ORTHO05D006250 2.2e-31 141.0 348 34.2
BcaC09g52048 Brassica carinata HOM05D005141 ORTHO05D006250 2.7e-29 134.0 399 33.6
unitig_37.g12225 Utricularia gibba HOM05D005141 ORTHO05D006250 5.1e-28 129.8 359 33.7
Aqoxy81s001 Aquilegia oxysepala HOM05D005141 ORTHO05D006250 2.8e-26 124.0 132 53.8
Mapoly0079s0053 Marchantia polymorpha HOM05D005141 ORTHO05D006250 3.1e-25 120.6 364 33.8
Pp3c22_12420 Physcomitrium patens HOM05D005141 ORTHO05D006250 6.8e-25 119.4 378 33.1
AagrBONN_evm.TU.Sc2ySwM_117.408 Anthoceros agrestis HOM05D005141 ORTHO05D006250 1.4e-22 111.7 305 34.4
unitig_46.g18533 Utricularia gibba HOM05D005141 ORTHO05D006250 1.4e-22 111.7 189 42.9
Ah.10g025860 Amaranthus hybridus HOM05D005141 ORTHO05D006250 2.4e-22 110.9 213 39.9
Pp3c19_8700 Physcomitrium patens HOM05D005141 ORTHO05D006250 9.2e-22 109.0 391 32.5
CSS0000568 Camellia sinensis var. sinensis HOM05D005141 ORTHO05D006250 1.9e-19 101.3 127 49.6
SMO143G0273 Selaginella moellendorffii HOM05D005141 ORTHO05D006250 4.9e-15 86.7 125 45.6
BcaC08g44885 Brassica carinata HOM05D005141 ORTHO05D006250 2.7e-13 80.9 176 34.7
A06p26660 Brassica napus HOM05D005141 ORTHO05D006250 1.1e-11 75.5 176 34.7
C06p25010 Brassica napus HOM05D000698 ORTHO05D006250 4.3e-11 73.6 192 32.8
Haze_10527 Corylus avellana HOM05D005141 ORTHO05D006250 5.6e-11 73.2 76 52.6
Cpa.g.sc91.24 Carica papaya HOM05D005141 ORTHO05D006250 1.1e-09 68.9 89 49.4
Potri.012G044900 Populus trichocarpa HOM05D002346 ORTHO05D002452 1.9e-06 58.2 118 37.3
SEGI_09816 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 5.4e-06 56.6 151 34.4
C07p35200 Brassica napus HOM05D005141 ORTHO05D006250 7.1e-06 56.2 63 49.2
BolC7t44052H Brassica oleracea HOM05D005141 ORTHO05D006250 7.1e-06 56.2 63 49.2
GSVIVG01011679001 Vitis vinifera HOM05D002346 ORTHO05D002452 9.3e-06 55.8 135 31.9


User provided reference genes

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