Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G3314 Trochodendron aralioides HOM05D006343 ORTHO05D005694 2.6e-147 525.4 277 100.0
Nn1g01591 Nelumbo nucifera HOM05D006343 ORTHO05D005694 9.3e-60 234.6 305 49.5
GSVIVG01026998001 Vitis vinifera HOM05D006343 ORTHO05D005694 3.9e-50 202.6 306 48.4
Dinv43841 Davidia involucrata HOM05D006343 ORTHO05D005694 6.9e-47 191.8 283 47.3
Ciclev10021525m.g Citrus clementina HOM05D006343 ORTHO05D005694 2.0e-46 190.3 293 45.4
Sabra14G0063500 Salix brachista HOM05D006343 ORTHO05D005694 3.2e-44 183.0 322 45.0
CiPaw.02G033200 Carya illinoinensis HOM05D006343 ORTHO05D005694 7.9e-43 178.3 310 46.8
Oeu055797.1 Olea europaea HOM05D006343 ORTHO05D005694 7.9e-43 178.3 288 43.8
Manes.05G031900 Manihot esculenta HOM05D006343 ORTHO05D005694 2.0e-41 173.7 314 43.9
Dinv32502 Davidia involucrata HOM05D006343 ORTHO05D005694 2.6e-41 173.3 228 48.2
Manes.01G254700 Manihot esculenta HOM05D006343 ORTHO05D005694 1.3e-40 171.0 317 43.2
Potri.014G087500 Populus trichocarpa HOM05D006343 ORTHO05D005694 3.7e-40 169.5 320 41.6
CiPaw.01G064000 Carya illinoinensis HOM05D006343 ORTHO05D005694 4.8e-40 169.1 321 41.7
Potri.002G161700 Populus trichocarpa HOM05D006343 ORTHO05D005694 3.1e-39 166.4 323 44.0
Actinidia20887 Actinidia chinensis HOM05D006343 ORTHO05D005694 7.0e-39 165.2 285 42.1
Prupe.2G173800 Prunus persica HOM05D006343 ORTHO05D005694 1.2e-38 164.5 297 43.1
Sabra02G0128600 Salix brachista HOM05D006343 ORTHO05D005694 1.0e-37 161.4 317 41.3
Oeu035725.1 Olea europaea HOM05D003054 ORTHO05D003376 1.3e-37 161.0 249 41.0
MSTRG.12522 Avicennia marina HOM05D006343 ORTHO05D005694 1.7e-37 160.6 296 41.9
MSTRG.18339 Avicennia marina HOM05D006343 ORTHO05D005694 1.7e-37 160.6 285 39.3
Oeu035731.1 Olea europaea HOM05D006343 ORTHO05D005694 2.2e-37 160.2 286 39.5
SalBow6G3791 Salvia bowleyana HOM05D006343 ORTHO05D005694 1.9e-36 157.1 288 42.7
Atru.chr5.528 Acer truncatum HOM05D006343 ORTHO05D005694 2.5e-36 156.8 300 43.3
Oeu035722.1 Olea europaea HOM05D006343 ORTHO05D005694 5.5e-36 155.6 285 39.3
Hma1.2p1_0702F.1_g206150 Hydrangea macrophylla HOM05D006343 ORTHO05D005694 1.6e-35 154.1 282 44.0
CANSAT56G2487 Cannabis sativa HOM05D006343 ORTHO05D005694 2.3e-34 150.2 329 41.0
Oeu035719.1 Olea europaea HOM05D003054 ORTHO05D003376 8.8e-34 148.3 252 38.1
Rhsim01G0164400 Rhododendron simsii HOM05D006343 ORTHO05D005694 8.8e-34 148.3 301 38.5
Nitab4.5_0001040g0020 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.2e-33 147.9 314 36.6
Nitab4.5_0001655g0110 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.5e-33 147.5 315 36.8
Aqoxy7G00256 Aquilegia oxysepala HOM05D006343 ORTHO05D005694 2.0e-33 147.1 325 38.2
QL04p054168 Quercus lobata HOM05D006343 ORTHO05D005694 6.3e-32 142.1 242 41.7
MD01G1067400 Malus domestica HOM05D006343 ORTHO05D005694 2.7e-30 136.7 321 36.1
MD07G1133500 Malus domestica HOM05D006343 ORTHO05D005694 1.3e-29 134.4 313 38.0
Rhsim01G0164000 Rhododendron simsii HOM05D006343 ORTHO05D005694 1.7e-29 134.0 313 39.6
Lsat_1_v5_gn_7_4060 Lactuca sativa HOM05D006343 ORTHO05D005694 3.8e-29 132.9 307 34.9
vmacro20913 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 8.5e-29 131.7 314 39.8
Eucgr.I00992 Eucalyptus grandis HOM05D006343 ORTHO05D005694 1.5e-28 131.0 306 38.9
Oeu035728.1 Olea europaea HOM05D006343 ORTHO05D005694 1.5e-28 131.0 262 37.0
CSS0004449 Camellia sinensis var. sinensis HOM05D006343 ORTHO05D005694 8.0e-27 125.2 303 37.6
Lsat_1_v5_gn_7_4100 Lactuca sativa HOM05D006343 ORTHO05D005694 1.8e-26 124.0 306 33.3
Rhsim06G0236200 Rhododendron simsii HOM05D006343 ORTHO05D005694 3.0e-26 123.2 289 35.6
RcHm_v2.0_Chr1g0357021 Rosa chinensis HOM05D006343 ORTHO05D005694 8.8e-26 121.7 318 32.7
CDE02G1832 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 4.4e-25 119.4 291 35.1
Glyma.07G068200 Glycine max HOM05D006343 ORTHO05D005694 7.5e-25 118.6 326 38.0
Cc02_g38320 Coffea canephora HOM05D006343 ORTHO05D005694 9.8e-25 118.2 305 33.8
FAN10G0914 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.3e-24 117.9 316 32.9
FAN10G3829 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.7e-24 117.5 316 32.6
vmacro20912 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 2.2e-24 117.1 310 34.8
Phvul.010G101000 Phaseolus vulgaris HOM05D006343 ORTHO05D005694 2.8e-24 116.7 299 36.8
FAN01G0301 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.7e-24 116.3 322 32.0
FvH4_7g14980 Fragaria vesca HOM05D006343 ORTHO05D005694 4.8e-24 115.9 317 32.8
FAN03G1905 Fragaria x ananassa HOM05D006343 ORTHO05D005694 6.3e-24 115.5 313 32.9
SGA_v2.0_scaffold1G00635 Striga asiatica HOM05D006343 ORTHO05D005694 6.3e-24 115.5 327 33.9
FAN06G0921 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.1e-23 114.8 317 32.5
Lalb_Chr17g0339411 Lupinus albus HOM05D006343 ORTHO05D005694 1.4e-23 114.4 325 35.4
CAN.G650.25 Capsicum annuum HOM05D006343 ORTHO05D005694 2.0e-22 110.5 312 31.7
VMungo0331G0061 Vigna mungo HOM05D006343 ORTHO05D005694 2.7e-22 110.2 298 35.6
Solyc02g070700.3 Solanum lycopersicum HOM05D006343 ORTHO05D005694 7.7e-22 108.6 305 32.5
CAN.G650.32 Capsicum annuum HOM05D006343 ORTHO05D005694 1.3e-21 107.8 323 31.9
Sopen02g019780 Solanum pennellii HOM05D006343 ORTHO05D005694 1.7e-21 107.5 308 33.1
CsaV3_6G000720 Cucumis sativus L. HOM05D006343 ORTHO05D005694 2.9e-21 106.7 306 40.5
Glyma.16G034200 Glycine max HOM05D006343 ORTHO05D005694 3.8e-21 106.3 335 36.4
Lj3g0021957 Lotus japonicus HOM05D006343 ORTHO05D005694 5.0e-21 105.9 234 34.6
CAN.G650.35 Capsicum annuum HOM05D006343 ORTHO05D005694 1.1e-20 104.8 315 31.7
FAN03G1311 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.5e-20 104.4 319 32.3
CAN.G2424.1 Capsicum annuum HOM05D006343 ORTHO05D005694 3.2e-20 103.2 346 31.5
Gorai.007G101600 Gossypium raimondii HOM05D006343 ORTHO05D005694 3.2e-20 103.2 301 36.2
COL.COLO4_12739 Corchorus olitorius HOM05D006343 ORTHO05D005694 4.2e-20 102.8 297 37.4
Cpa.g.sc11.35 Carica papaya HOM05D006343 ORTHO05D005694 5.5e-20 102.4 315 34.9
FAN06G4353 Fragaria x ananassa HOM05D006343 ORTHO05D005694 9.5e-20 101.7 316 31.6
FvH4_7g14870 Fragaria vesca HOM05D006343 ORTHO05D005694 1.2e-19 101.3 316 32.0
Duzib138G0695 Durio zibethinus HOM05D006343 ORTHO05D005694 2.1e-19 100.5 305 34.8
Nitab4.5_0003369g0030 Nicotiana tabacum HOM05D006343 ORTHO05D005694 2.1e-19 100.5 302 31.1
FAN10G3557 Fragaria x ananassa HOM05D006343 ORTHO05D005694 8.0e-19 98.6 324 33.6
unitig_22.g5289 Utricularia gibba HOM05D006343 ORTHO05D005694 1.4e-18 97.8 287 33.4
PGR042G0313 Punica granatum HOM05D006343 ORTHO05D005694 1.8e-18 97.4 172 34.3
CDE06G1281 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 4.0e-18 96.3 216 36.6
CAN.G650.28 Capsicum annuum HOM05D006343 ORTHO05D005694 8.8e-18 95.1 242 30.6
DCAR_015701 Daucus carota HOM05D006343 ORTHO05D005694 2.0e-17 94.0 284 33.8
FAN06G0140 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.6e-17 93.6 314 31.5
Gohir.D11G095300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 4.4e-17 92.8 300 36.0
DCAR_015699 Daucus carota HOM05D006343 ORTHO05D005694 9.8e-17 91.7 282 33.3
Nitab4.5_0002749g0010 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.7e-16 90.9 309 30.4
FAN10G3545 Fragaria x ananassa HOM05D006343 ORTHO05D005694 8.3e-16 88.6 360 30.8
ECA233G1044 Erigeron canadensis HOM05D006343 ORTHO05D005694 1.1e-15 88.2 262 35.1
TWI23G0998 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 1.4e-15 87.8 308 37.0
Cfa003895 Carpinus fangiana HOM05D006343 ORTHO05D005694 1.6e-14 84.3 299 33.1
TWI14G1134 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 2.0e-14 84.0 298 34.6
MELO3C021196.2 Cucumis melo HOM05D006343 ORTHO05D005694 4.5e-14 82.8 306 35.9
FAN10G3360 Fragaria x ananassa HOM05D006343 ORTHO05D005694 7.7e-14 82.0 212 30.7
Sed0018743 Sechium edule HOM05D006343 ORTHO05D005694 7.7e-14 82.0 296 33.1
FAN06G3127 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.3e-13 81.3 212 31.6
FvH4_7g14880 Fragaria vesca HOM05D006343 ORTHO05D005694 2.9e-13 80.1 212 32.1
PSO478G0137 Papaver somniferum HOM05D020029 ORTHO05D005694 2.9e-13 80.1 338 29.0
FAN10G1634 Fragaria x ananassa HOM05D006343 ORTHO05D005694 6.6e-13 79.0 212 30.2
Migut.D00457 Erythranthe guttata HOM05D006343 ORTHO05D005694 1.1e-12 78.2 170 40.0
PSO782G1147 Papaver somniferum HOM05D020029 ORTHO05D005694 1.9e-12 77.4 237 28.7
Duzib133G0920 Durio zibethinus HOM05D006343 ORTHO05D005694 7.3e-12 75.5 304 34.2
Thecc.01G356100 Theobroma cacao HOM05D006343 ORTHO05D005694 1.2e-11 74.7 296 34.8
PSO478G4526 Papaver somniferum HOM05D020029 ORTHO05D005694 2.1e-11 73.9 206 30.6
Zm00001eb222450 Zea mays HOM05D024295 ORTHO05D020951 6.1e-11 72.4 263 28.1
Potri.014G099800 Populus trichocarpa HOM05D006343 ORTHO05D005694 1.0e-10 71.6 249 28.9
PSO782G1271 Papaver somniferum HOM05D020029 ORTHO05D005694 1.8e-10 70.9 241 28.2
THA.LOC104825850 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 2.3e-10 70.5 340 31.5
Haze_15537 Corylus avellana HOM05D006343 ORTHO05D005694 5.2e-10 69.3 297 30.6
Gohir.D08G153300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 6.8e-10 68.9 302 33.4
PSO782G0031 Papaver somniferum HOM05D020029 ORTHO05D005694 8.9e-10 68.6 324 25.9
unitig_8.g3737 Utricularia gibba HOM05D006343 ORTHO05D005694 8.9e-10 68.6 296 28.0
Gohir.A11G090700 Gossypium hirsutum HOM05D006343 ORTHO05D005694 5.7e-09 65.9 313 30.7
PGSC0003DMG400008290 Solanum tuberosum HOM05D006343 ORTHO05D005694 5.7e-09 65.9 160 33.8
HPP92_025479 Vanilla planifolia HOM05D049984 ORTHO05D020951 7.5e-09 65.5 252 32.9
Thhalv10028840m.g Eutrema salsugineum HOM05D012121 ORTHO05D005694 9.8e-09 65.1 326 27.3
Sc01g0003550 Simmondsia chinensis HOM05D006343 ORTHO05D005694 9.8e-09 65.1 288 28.5
CARHR248400 Cardamine hirsuta HOM05D012121 ORTHO05D005694 1.3e-08 64.7 329 27.1
HPP92_025480 Vanilla planifolia HOM05D049984 ORTHO05D020951 2.2e-08 63.9 204 27.9
FAN03G0040 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.7e-08 63.2 102 38.2
FAN01G2602 Fragaria x ananassa HOM05D006343 ORTHO05D005694 6.4e-08 62.4 192 35.4
Actinidia10044 Actinidia chinensis HOM05D006343 ORTHO05D005694 1.8e-07 60.8 112 39.3
ClCG06G003540 Citrullus lanatus HOM05D006343 ORTHO05D005694 2.0e-06 57.4 313 30.7
Zm00001eb047010 Zea mays HOM05D024295 ORTHO05D020951 2.7e-06 57.0 246 26.8
THA.LOC104801575 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 7.8e-06 55.5 113 37.2


User provided reference genes

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