Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 5.5e-107 391.0 196 100.0
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 2.1e-69 266.2 188 72.9
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 5.0e-68 261.5 188 71.8
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 3.6e-66 255.4 196 66.8
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 8.1e-66 254.2 196 68.4
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 4.4e-64 248.4 190 65.8
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 1.3e-63 246.9 197 65.0
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 6.4e-63 244.6 195 63.6
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 8.3e-63 244.2 186 65.1
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 1.1e-62 243.8 199 63.8
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 1.9e-62 243.0 200 62.5
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 2.4e-62 242.7 195 63.1
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 3.2e-62 242.3 187 65.8
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 3.2e-62 242.3 188 66.0
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 4.1e-62 241.9 187 65.8
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 9.2e-62 240.7 200 61.5
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 9.2e-62 240.7 196 63.8
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 9.2e-62 240.7 195 62.6
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 9.2e-62 240.7 195 62.6
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 9.2e-62 240.7 198 64.6
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 1.6e-61 240.0 190 64.2
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 2.1e-61 239.6 199 63.3
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.7e-61 239.2 195 62.6
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 2.7e-61 239.2 190 63.7
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 2.7e-61 239.2 187 64.7
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 2.7e-61 239.2 195 62.1
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 3.5e-61 238.8 187 64.7
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 7.8e-61 237.7 196 62.8
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 1.7e-60 236.5 198 62.1
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 2.3e-60 236.1 194 62.9
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 3.0e-60 235.7 195 61.5
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 3.9e-60 235.3 191 63.4
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 1.1e-59 233.8 196 61.7
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 1.9e-59 233.0 190 62.1
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 2.5e-59 232.6 192 63.5
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 7.3e-59 231.1 191 60.7
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 9.5e-59 230.7 188 64.4
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.2e-58 230.3 190 59.5
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 2.1e-58 229.6 189 63.5
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 2.1e-58 229.6 189 61.4
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 2.1e-58 229.6 190 58.9
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 2.1e-58 229.6 188 63.8
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 2.8e-58 229.2 243 53.9
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 2.8e-58 229.2 187 63.1
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 6.2e-58 228.0 187 62.6
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 6.2e-58 228.0 187 61.5
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 8.1e-58 227.6 190 58.9
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 1.4e-57 226.9 186 61.8
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 1.8e-57 226.5 192 58.9
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 4.0e-57 225.3 191 59.7
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 1.2e-56 223.8 187 61.0
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 5.8e-56 221.5 189 59.8
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 5.8e-56 221.5 190 58.9
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 5.8e-56 221.5 190 58.9
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 9.9e-56 220.7 187 60.4
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.7e-55 219.9 187 60.4
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 2.9e-55 219.2 185 60.0
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 3.8e-55 218.8 187 60.4
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 4.9e-55 218.4 191 56.5
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 4.9e-55 218.4 191 59.7
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 4.9e-55 218.4 187 60.4
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 6.4e-55 218.0 196 57.1
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 6.4e-55 218.0 196 57.1
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 6.4e-55 218.0 190 58.9
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 8.4e-55 217.6 188 59.0
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 1.9e-54 216.5 191 56.5
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 1.9e-54 216.5 191 56.0
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 2.4e-54 216.1 186 59.1
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 2.4e-54 216.1 187 59.9
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 4.2e-54 215.3 191 56.5
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 4.2e-54 215.3 190 58.4
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 4.2e-54 215.3 193 58.0
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 5.4e-54 214.9 187 57.8
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 9.2e-54 214.2 187 56.7
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 9.2e-54 214.2 185 59.5
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 1.6e-53 213.4 187 56.7
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 1.6e-53 213.4 191 55.5
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 2.7e-53 212.6 201 56.7
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 2.7e-53 212.6 189 58.2
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 4.6e-53 211.8 191 57.1
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 1.3e-52 210.3 272 46.3
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 3.0e-52 209.1 189 57.1
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 4.0e-49 198.7 190 55.3
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 6.9e-49 198.0 167 62.3
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 1.2e-48 197.2 198 52.5
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 4.4e-48 195.3 185 54.1
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 3.2e-46 189.1 180 53.9
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 2.1e-45 186.4 187 52.9
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 2.7e-45 186.0 148 64.2
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 4.6e-45 185.3 156 60.9
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 6.0e-45 184.9 147 63.9
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 5.1e-44 181.8 153 60.1
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 6.2e-42 174.9 108 77.8
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 8.1e-42 174.5 160 56.2
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 9.0e-41 171.0 187 50.8
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 4.9e-39 165.2 110 71.8
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 1.4e-38 163.7 196 51.0
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 1.3e-31 140.6 123 56.9
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 8.4e-31 137.9 126 57.1
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.6e-26 123.6 91 69.2
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 1.0e-23 114.4 191 36.6
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 6.7e-20 101.7 98 54.1
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 3.1e-17 92.8 81 66.7
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 7.7e-16 88.2 74 62.2
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 1.8e-12 77.0 53 67.9
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 6.9e-09 65.1 40 67.5


User provided reference genes

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