Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1362 Trochodendron aralioides HOM05D000325 ORTHO05D000583 1.3e-135 486.5 267 100.0
TAR628G1619 Trochodendron aralioides HOM05D000325 ORTHO05D000583 1.1e-129 466.8 267 95.5
TAR628G0208 Trochodendron aralioides HOM05D000325 ORTHO05D000583 6.3e-122 441.0 267 88.0
TAR381G0770 Trochodendron aralioides HOM05D000325 ORTHO05D000583 4.6e-72 275.4 268 61.2
Prupe.8G049000 Prunus persica HOM05D000325 ORTHO05D000583 2.5e-49 199.9 267 48.7
Nn1g05203 Nelumbo nucifera HOM05D000325 ORTHO05D000583 5.1e-47 192.2 241 56.0
Dinv44715 Davidia involucrata HOM05D000325 ORTHO05D000583 1.3e-45 187.6 264 50.8
CANSAT25G1187 Cannabis sativa HOM05D000325 ORTHO05D000583 1.0e-42 177.9 269 50.2
Haze_17882 Corylus avellana HOM05D000325 ORTHO05D000583 1.7e-42 177.2 293 46.8
Dinv13074 Davidia involucrata HOM05D000325 ORTHO05D000583 1.7e-42 177.2 269 47.6
PSO210G5173 Papaver somniferum HOM05D000325 ORTHO05D000583 2.9e-42 176.4 271 49.1
PSO447G0148 Papaver somniferum HOM05D000325 ORTHO05D000583 3.8e-42 176.0 271 49.1
Atru.chr13.1887 Acer truncatum HOM05D000325 ORTHO05D000583 1.4e-41 174.1 249 50.2
Duzib211G0208 Durio zibethinus HOM05D000325 ORTHO05D000583 5.5e-41 172.2 267 46.4
MD00G1078400 Malus domestica HOM05D000325 ORTHO05D000583 5.5e-41 172.2 264 47.7
CiPaw.15G007100 Carya illinoinensis HOM05D000325 ORTHO05D000583 2.3e-39 166.8 273 45.8
CSS0040428 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D000583 4.3e-38 162.5 264 45.5
Duzib116G0729 Durio zibethinus HOM05D000325 ORTHO05D000583 2.8e-37 159.8 274 45.6
MD10G1043300 Malus domestica HOM05D000325 ORTHO05D000583 8.2e-37 158.3 326 39.3
QL02p034859 Quercus lobata HOM05D000325 ORTHO05D000583 1.1e-36 157.9 272 47.4
Nn5g28949 Nelumbo nucifera HOM05D000325 ORTHO05D000583 1.5e-35 154.1 254 46.1
RcHm_v2.0_Chr6g0272921 Rosa chinensis HOM05D000325 ORTHO05D000583 1.5e-35 154.1 304 41.1
Thecc.08G198200 Theobroma cacao HOM05D000325 ORTHO05D000583 5.9e-35 152.1 268 47.4
Potri.013G117100 Populus trichocarpa HOM05D000325 ORTHO05D000583 7.7e-35 151.8 304 39.1
CiPaw.16G005900 Carya illinoinensis HOM05D000325 ORTHO05D000583 2.2e-34 150.2 266 40.2
Hma1.2p1_1088F.1_g255560 Hydrangea macrophylla HOM05D000325 ORTHO05D000583 5.0e-34 149.1 282 41.1
FvH4_2g12480 Fragaria vesca HOM05D000325 ORTHO05D000583 3.2e-33 146.4 267 44.2
FAN24G2200 Fragaria x ananassa HOM05D000325 ORTHO05D000583 3.2e-33 146.4 267 43.1
Ciclev10000853m.g Citrus clementina HOM05D000325 ORTHO05D000583 9.4e-33 144.8 265 43.4
Gohir.A06G109400 Gossypium hirsutum HOM05D000325 ORTHO05D000583 1.6e-32 144.1 267 44.6
Manes.02G187600 Manihot esculenta HOM05D000325 ORTHO05D000583 2.1e-32 143.7 264 42.8
Manes.18G097500 Manihot esculenta HOM05D000325 ORTHO05D000583 2.1e-32 143.7 264 42.4
FAN20G2075 Fragaria x ananassa HOM05D000325 ORTHO05D000583 4.7e-32 142.5 266 43.6
FAN27G3024 Fragaria x ananassa HOM05D000325 ORTHO05D000583 4.7e-32 142.5 266 43.6
FAN15G1419 Fragaria x ananassa HOM05D000325 ORTHO05D000583 6.1e-32 142.1 266 44.0
Cpa.g.sc66.122 Carica papaya HOM05D000325 ORTHO05D000583 5.1e-31 139.0 265 43.0
Sabra13G0099200 Salix brachista HOM05D000325 ORTHO05D000583 6.7e-31 138.7 326 35.3
Lj4A110G75 Lonicera japonica HOM05D000325 ORTHO05D000583 3.3e-30 136.3 269 45.7
MBI05_g01283_MAGBIO Magnolia biondii HOM05D000325 ORTHO05D000583 4.4e-30 136.0 261 40.6
Cc10_g06150 Coffea canephora HOM05D000325 ORTHO05D000583 1.3e-29 134.4 269 40.5
CSS0031658 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D000583 3.7e-29 132.9 231 45.0
Gorai.009G261900 Gossypium raimondii HOM05D000325 ORTHO05D000583 2.4e-28 130.2 252 42.1
Gohir.A05G248700 Gossypium hirsutum HOM05D000325 ORTHO05D000583 4.1e-28 129.4 260 41.5
Gohir.D05G250500 Gossypium hirsutum HOM05D000325 ORTHO05D000583 9.1e-28 128.3 252 41.7
Hma1.2p1_2822F.1_g329040 Hydrangea macrophylla HOM05D000325 ORTHO05D000583 2.6e-27 126.7 282 37.6
Potri.019G087400 Populus trichocarpa HOM05D000325 ORTHO05D000583 1.9e-25 120.6 305 35.1
Peaxi162Scf00267g01222 Petunia axillaris HOM05D000325 ORTHO05D000583 7.2e-25 118.6 268 39.2
vmacro21209 Vaccinium macrocarpon HOM05D000325 ORTHO05D000583 2.7e-24 116.7 242 42.1
Glyma.16G157900 Glycine max HOM05D000325 ORTHO05D000583 4.7e-24 115.9 253 37.2
Ca_04515_v3 Cicer arietinum L. HOM05D000325 ORTHO05D000583 6.1e-24 115.5 267 40.8
VMungo0464G0878 Vigna mungo HOM05D000325 ORTHO05D000583 1.4e-23 114.4 251 37.8
Glyma.02G075900 Glycine max HOM05D000325 ORTHO05D000583 2.3e-23 113.6 253 40.3
Nitab4.5_0001307g0110 Nicotiana tabacum HOM05D000325 ORTHO05D000583 3.0e-23 113.2 275 38.5
Solyc04g072560.3 Solanum lycopersicum HOM05D000325 ORTHO05D000583 5.2e-23 112.5 271 36.5
Rhsim06G0087600 Rhododendron simsii HOM05D000325 ORTHO05D000583 6.7e-23 112.1 253 39.9
TWI32G0264 Tripterygium wilfordii HOM05D000325 ORTHO05D000583 1.5e-22 110.9 318 35.8
Lj2g0001824 Lotus japonicus HOM05D000325 ORTHO05D000583 2.6e-22 110.2 267 40.8
Nitab4.5_0000553g0100 Nicotiana tabacum HOM05D000325 ORTHO05D000583 4.4e-22 109.4 275 38.2
Gorai.010G129400 Gossypium raimondii HOM05D000325 ORTHO05D000583 7.5e-22 108.6 186 47.3
CAN.G1010.19 Capsicum annuum HOM05D000325 ORTHO05D000583 1.3e-21 107.8 268 37.3
PGR102G1485 Punica granatum HOM05D000325 ORTHO05D000583 1.7e-21 107.5 251 45.0
PGSC0003DMG400027555 Solanum tuberosum HOM05D000325 ORTHO05D000583 2.2e-21 107.1 270 36.7
Aqoxy5G01982 Aquilegia oxysepala HOM05D000325 ORTHO05D000583 2.8e-21 106.7 297 36.4
Sopen04g028760 Solanum pennellii HOM05D000325 ORTHO05D000583 6.3e-21 105.5 270 34.8
Gohir.D06G113600 Gossypium hirsutum HOM05D000325 ORTHO05D000583 5.3e-20 102.4 232 40.5
Actinidia15629 Actinidia chinensis HOM05D000325 ORTHO05D000583 7.0e-20 102.1 182 43.4
Eucgr.F04150 Eucalyptus grandis HOM05D000325 ORTHO05D000583 7.0e-20 102.1 297 33.3
MSTRG.24960 Avicennia marina HOM05D000325 ORTHO05D000583 3.5e-19 99.8 261 38.3
Lalb_Chr03g0035781 Lupinus albus HOM05D000325 ORTHO05D000583 2.2e-18 97.1 254 37.8
Phvul.004G086100 Phaseolus vulgaris HOM05D000325 ORTHO05D000583 2.9e-18 96.7 213 36.2
SalBow7G4286 Salvia bowleyana HOM05D000325 ORTHO05D000583 1.1e-17 94.7 225 41.3
GSVIVG01001596001 Vitis vinifera HOM05D000325 ORTHO05D000583 1.1e-17 94.7 106 49.1
Psat1g093520 Pisum sativum HOM05D000325 ORTHO05D000583 3.2e-17 93.2 320 35.3
arahy.Tifrunner.gnm1.ann1.SRJ81T Arachis hypogaea HOM05D000325 ORTHO05D000583 7.2e-17 92.0 286 36.0
TPR.G16209 Trifolium pratense HOM05D000325 ORTHO05D000583 3.6e-16 89.7 353 31.7
EL10Ac1g00867 Beta vulgaris HOM05D000325 ORTHO05D000583 4.7e-16 89.4 225 36.0
MSTRG.945 Avicennia marina HOM05D000325 ORTHO05D000583 6.1e-16 89.0 253 40.3
ClCG08G003020 Citrullus lanatus HOM05D000325 ORTHO05D000583 8.0e-16 88.6 321 34.3
Sc26g0002360 Simmondsia chinensis HOM05D000325 ORTHO05D000583 1.0e-15 88.2 265 36.6
MSTRG.24476 Avicennia marina HOM05D000325 ORTHO05D000583 2.3e-15 87.0 249 32.5
CsaV3_6G002880 Cucumis sativus L. HOM05D000325 ORTHO05D000583 3.0e-15 86.7 314 34.7
arahy.Tifrunner.gnm1.ann1.YQZL1S Arachis hypogaea HOM05D000325 ORTHO05D000583 8.8e-15 85.1 227 38.3
Migut.C00220 Erythranthe guttata HOM05D000325 ORTHO05D000583 4.4e-14 82.8 254 31.9
MELO3C026153.2 Cucumis melo HOM05D000325 ORTHO05D000583 5.7e-14 82.4 314 34.1
Oeu036730.1 Olea europaea HOM05D000325 ORTHO05D000583 1.7e-13 80.9 178 43.8
Sed0013859 Sechium edule HOM05D000325 ORTHO05D000583 2.8e-13 80.1 327 34.6
Sed0025546 Sechium edule HOM05D000325 ORTHO05D000583 4.8e-13 79.3 340 29.1
Oeu027228.1 Olea europaea HOM05D000325 ORTHO05D000583 6.3e-13 79.0 261 34.9
Medtr6g038150 Medicago truncatula HOM05D000325 ORTHO05D000583 1.1e-12 78.2 277 33.9
THA.LOC104816186 Tarenaya hassleriana HOM05D000325 ORTHO05D000583 2.0e-11 73.9 197 45.7
ATR0564G174 Amborella trichopoda HOM05D000325 ORTHO05D000583 5.9e-11 72.4 189 40.2
Ah.12g063980 Amaranthus hybridus HOM05D000325 ORTHO05D000583 6.5e-10 68.9 290 31.0
DCAR_019987 Daucus carota HOM05D000325 ORTHO05D000583 6.5e-10 68.9 251 33.9
TWI60G1093 Tripterygium wilfordii HOM05D000325 ORTHO05D000583 6.5e-10 68.9 101 46.5
CDE08G1455 Ceratophyllum demersum HOM05D000325 ORTHO05D000583 2.5e-09 67.0 213 31.9
Hund26660 Selenicereus undatus HOM05D000325 ORTHO05D000583 9.4e-09 65.1 222 39.2
THA.LOC104806777 Tarenaya hassleriana HOM05D000325 ORTHO05D000583 9.4e-09 65.1 259 33.2
HPP92_024871 Vanilla planifolia HOM05D000325 ORTHO05D000583 8.0e-08 62.0 240 34.6
BcaC08g43800 Brassica carinata HOM05D000325 ORTHO05D027058 3.0e-07 60.1 252 34.9
BolC6t36310H Brassica oleracea HOM05D000325 ORTHO05D000583 3.0e-07 60.1 252 34.9
AUR62030666 Chenopodium quinoa HOM05D000325 ORTHO05D000583 6.8e-07 58.9 239 28.5
CDE02G4704 Ceratophyllum demersum HOM05D000325 ORTHO05D000583 8.8e-07 58.5 232 34.9
Os08g0175200 Oryza sativa ssp. japonica HOM05D000325 ORTHO05D000583 1.2e-06 58.2 239 31.8
SalBow6G3856 Salvia bowleyana HOM05D000325 ORTHO05D000583 1.2e-06 58.2 205 32.2
ECA247G1322 Erigeron canadensis HOM05D000325 ORTHO05D000583 3.4e-06 56.6 222 35.1
SalBow6G3024 Salvia bowleyana HOM05D000325 ORTHO05D000583 3.4e-06 56.6 203 33.5
SGA_v2.0_scaffold201G41421 Striga asiatica HOM05D000325 ORTHO05D000583 3.4e-06 56.6 192 38.0
AUR62024881 Chenopodium quinoa HOM05D000325 ORTHO05D000583 4.4e-06 56.2 268 25.4
Zm00001eb414760 Zea mays HOM05D000325 ORTHO05D000583 4.4e-06 56.2 244 29.1


User provided reference genes

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