Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 3.2e-75 285.4 192 100.0
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 4.8e-31 138.7 135 82.2
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 5.3e-30 135.2 139 83.5
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 3.5e-29 132.5 137 70.1
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 2.9e-28 129.4 139 71.9
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 3.8e-28 129.0 129 78.3
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 3.8e-28 129.0 141 78.7
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 1.9e-27 126.7 137 70.1
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 4.2e-27 125.6 135 68.1
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 7.2e-27 124.8 134 76.1
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 1.2e-26 124.0 138 64.5
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 1.6e-26 123.6 138 68.1
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 2.7e-26 122.9 129 75.2
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 6.1e-26 121.7 128 63.3
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 8.0e-26 121.3 127 65.4
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 1.0e-25 120.9 129 72.1
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 1.4e-25 120.6 129 73.6
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 2.3e-25 119.8 130 74.6
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 2.3e-25 119.8 130 74.6
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 2.3e-25 119.8 129 77.5
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 4.0e-25 119.0 149 65.1
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 4.0e-25 119.0 153 64.1
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 5.2e-25 118.6 129 78.3
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 6.8e-25 118.2 132 76.5
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 8.8e-25 117.9 138 74.6
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 8.8e-25 117.9 133 79.7
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 8.8e-25 117.9 137 73.7
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 2.6e-24 116.3 127 63.0
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 3.4e-24 115.9 131 79.4
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 3.4e-24 115.9 146 72.6
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 3.4e-24 115.9 138 71.7
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 3.4e-24 115.9 138 71.7
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 5.7e-24 115.2 129 75.2
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 9.8e-24 114.4 149 64.4
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 9.8e-24 114.4 132 78.0
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 1.7e-23 113.6 145 69.0
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 3.7e-23 112.5 137 67.2
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 3.7e-23 112.5 133 63.9
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 4.8e-23 112.1 129 70.5
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 6.3e-23 111.7 133 67.7
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 8.3e-23 111.3 146 63.0
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 8.3e-23 111.3 131 80.2
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 1.8e-22 110.2 139 63.3
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 1.8e-22 110.2 128 60.2
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 2.4e-22 109.8 129 63.6
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 5.4e-22 108.6 141 67.4
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 5.4e-22 108.6 134 76.1
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 7.0e-22 108.2 133 73.7
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 9.1e-22 107.8 141 66.7
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 1.2e-21 107.5 135 63.0
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 7.7e-21 104.8 129 64.3
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 7.7e-21 104.8 129 72.1
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 7.7e-21 104.8 133 60.9
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 1.7e-20 103.6 128 62.5
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 3.8e-20 102.4 129 71.3
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 1.9e-19 100.1 128 75.8
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 2.5e-19 99.8 138 64.5
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 2.5e-19 99.8 133 61.7
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 4.2e-19 99.0 134 58.2
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 1.6e-18 97.1 151 54.3
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 2.1e-18 96.7 134 70.9
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 2.8e-18 96.3 127 68.5
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 1.8e-17 93.6 139 61.9
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 2.0e-16 90.1 131 55.0
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 3.4e-16 89.4 140 60.7
AL6G44200 Arabidopsis lyrata HOM05D007581 ORTHO05D009250 4.4e-16 89.0 136 64.7
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 4.4e-16 89.0 137 64.2
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 4.4e-16 89.0 139 65.5
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 4.4e-16 89.0 137 64.2
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 4.4e-16 89.0 139 65.5
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 4.4e-16 89.0 139 59.0
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 7.5e-16 88.2 139 60.4
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 7.5e-16 88.2 164 50.6
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 9.8e-16 87.8 139 66.2
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 1.3e-15 87.4 138 64.5
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 1.7e-15 87.0 132 64.4
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 3.7e-15 85.9 139 52.5
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 3.7e-15 85.9 136 59.6
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 3.7e-15 85.9 58 69.0
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 1.8e-14 83.6 179 54.2
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 1.2e-13 80.9 139 51.8
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 1.2e-13 80.9 130 68.5
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 2.0e-13 80.1 118 61.9
CARHR256310 Cardamine hirsuta HOM05D007581 ORTHO05D009250 3.5e-13 79.3 139 56.8
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 4.5e-13 79.0 98 77.6
TWI75G0477 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 1.3e-12 77.4 98 81.6
unitig_578.g16109 Utricularia gibba HOM05D007581 ORTHO05D009250 8.6e-12 74.7 129 65.1
PSO761G0508 Papaver somniferum HOM05D007581 ORTHO05D009250 3.6e-10 69.3 98 72.4
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 3.1e-09 66.2 99 70.7
PGR102G1605 Punica granatum HOM05D007581 ORTHO05D009250 4.0e-09 65.9 123 68.3
CDE02G2090 Ceratophyllum demersum HOM05D002859 ORTHO05D003120 2.0e-08 63.5 100 81.0
QL09p000872 Quercus lobata HOM05D007581 ORTHO05D009250 2.6e-08 63.2 97 81.4
Cfa008025 Carpinus fangiana HOM05D007581 ORTHO05D009250 3.4e-08 62.8 33 87.9
Dinv25473 Davidia involucrata HOM05D007581 ORTHO05D009250 7.5e-08 61.6 59 54.2
HanXRQChr04g0102981 Helianthus annuus HOM05D007581 ORTHO05D009250 1.7e-07 60.5 91 75.8
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 8.3e-07 58.2 108 53.7
Mapoly0034s0024 Marchantia polymorpha HOM05D020710 ORTHO05D009250 8.3e-07 58.2 134 61.2


User provided reference genes

Program Settings