Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0811 Trochodendron aralioides HOM05D024248 ORTHO05D001429 1.2e-52 209.5 100 100.0
TAR628G1293 Trochodendron aralioides HOM05D024248 ORTHO05D001429 7.5e-52 206.8 100 98.0
TAR636G3318 Trochodendron aralioides HOM05D024248 ORTHO05D001429 4.6e-17 91.3 73 58.9
TAR376G0312 Trochodendron aralioides HOM05D024248 ORTHO05D001429 2.5e-15 85.5 70 57.1
TAR628G1637 Trochodendron aralioides HOM05D000955 ORTHO05D003340 9.6e-15 83.6 62 66.1
TAR376G0566 Trochodendron aralioides HOM05D024248 ORTHO05D001429 4.8e-14 81.3 83 49.4
CSS0046588 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 2.3e-08 62.4 74 47.3
CSS0009132 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 3.9e-08 61.6 74 45.9
CAN.G445.5 Capsicum annuum HOM05D000955 ORTHO05D001429 8.7e-08 60.5 77 41.6
CSS0003971 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 1.1e-07 60.1 78 44.9
CAN.G705.3 Capsicum annuum HOM05D000955 ORTHO05D001429 1.1e-07 60.1 77 44.2
CSS0027110 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 1.5e-07 59.7 78 44.9
CSS0012590 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 1.9e-07 59.3 74 44.6
CSS0049247 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 3.3e-07 58.5 78 44.9
CAN.G1938.3 Capsicum annuum HOM05D000955 ORTHO05D001429 3.3e-07 58.5 77 42.9
Manes.18G035900 Manihot esculenta HOM05D000955 ORTHO05D003340 3.3e-07 58.5 77 37.7
Sopen07g012140 Solanum pennellii HOM05D000955 ORTHO05D001429 3.3e-07 58.5 77 42.9
Zm00001eb100840 Zea mays HOM05D000955 ORTHO05D003340 4.3e-07 58.2 75 40.0
CSS0008676 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D001429 5.7e-07 57.8 74 43.2
Nn5g30250 Nelumbo nucifera HOM05D000955 ORTHO05D003340 7.4e-07 57.4 85 32.9
PGSC0003DMG400023125 Solanum tuberosum HOM05D000955 ORTHO05D001429 7.4e-07 57.4 77 41.6
Sopen01g015530 Solanum pennellii HOM05D000955 ORTHO05D001429 1.3e-06 56.6 75 41.3
Nitab4.5_0001024g0060 Nicotiana tabacum HOM05D000955 ORTHO05D001429 1.6e-06 56.2 77 40.3
Os09g0458900 Oryza sativa ssp. japonica HOM05D000955 ORTHO05D003340 1.6e-06 56.2 75 37.3
QL02p005131 Quercus lobata HOM05D000955 ORTHO05D001429 1.6e-06 56.2 70 38.6
Rhsim07G0229000 Rhododendron simsii HOM05D000955 ORTHO05D003340 1.6e-06 56.2 88 29.5
Lj4C144G12 Lonicera japonica HOM05D002458 ORTHO05D002603 2.1e-06 55.8 68 41.2
QL02p005175 Quercus lobata HOM05D000955 ORTHO05D001429 2.1e-06 55.8 70 38.6
Hma1.2p1_0982F.1_g243960 Hydrangea macrophylla HOM05D000955 ORTHO05D001429 2.8e-06 55.5 76 42.1
QL02p005085 Quercus lobata HOM05D000955 ORTHO05D001429 6.2e-06 54.3 73 41.1
Solyc01g150126.1 Solanum lycopersicum HOM05D000955 ORTHO05D001429 6.2e-06 54.3 74 41.9
Nitab4.5_0002501g0010 Nicotiana tabacum HOM05D000955 ORTHO05D001429 8.2e-06 53.9 77 40.3
Os07g0619200 Oryza sativa ssp. japonica HOM05D000955 ORTHO05D003340 8.2e-06 53.9 75 34.7
QL02p005214 Quercus lobata HOM05D000023 ORTHO05D000014 8.2e-06 53.9 70 38.6
Solyc12g088840.1 Solanum lycopersicum HOM05D000955 ORTHO05D001429 8.2e-06 53.9 75 38.7


User provided reference genes

Program Settings