Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0269 Trochodendron aralioides HOM05D002849 ORTHO05D007186 9.1e-133 476.9 232 100.0
TAR376G0763 Trochodendron aralioides HOM05D002849 ORTHO05D007186 1.2e-113 413.3 230 89.6
GSVIVG01008705001 Vitis vinifera HOM05D002849 ORTHO05D007186 1.1e-109 400.2 234 85.5
Nn6g31840 Nelumbo nucifera HOM05D002849 ORTHO05D007186 2.9e-107 392.1 231 84.8
Duzib093G2127 Durio zibethinus HOM05D002849 ORTHO05D007186 8.5e-107 390.6 229 84.7
vmacro21838 Vaccinium macrocarpon HOM05D002849 ORTHO05D007186 8.5e-107 390.6 236 83.1
Aqoxy6G01855 Aquilegia oxysepala HOM05D002849 ORTHO05D007186 1.1e-106 390.2 231 84.8
RcHm_v2.0_Chr6g0303961 Rosa chinensis HOM05D002849 ORTHO05D007186 1.5e-106 389.8 226 85.4
Dinv39573 Davidia involucrata HOM05D002849 ORTHO05D007186 1.9e-106 389.4 234 83.8
Gohir.D05G184300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 1.9e-106 389.4 229 83.8
Gorai.009G189800 Gossypium raimondii HOM05D002849 ORTHO05D007186 1.9e-106 389.4 229 83.8
Thecc.08G055100 Theobroma cacao HOM05D002849 ORTHO05D007186 1.9e-106 389.4 229 84.3
Gohir.A05G181300 Gossypium hirsutum HOM05D002849 ORTHO05D007186 4.2e-106 388.3 229 83.4
QL02p013578 Quercus lobata HOM05D002849 ORTHO05D007186 4.2e-106 388.3 228 83.8
FvH4_2g37771 Fragaria vesca HOM05D002849 ORTHO05D007186 5.5e-106 387.9 232 84.5
Atru.chr13.175_Atru.chr13.176 Acer truncatum HOM05D002849 ORTHO05D007186 7.2e-106 387.5 232 84.5
FAN20G1564 Fragaria x ananassa HOM05D002849 ORTHO05D007186 2.7e-105 385.6 231 84.0
MD08G1004800 Malus domestica HOM05D002849 ORTHO05D007186 2.7e-105 385.6 225 85.3
Prupe.1G356900 Prunus persica HOM05D002849 ORTHO05D007186 3.6e-105 385.2 230 83.0
PGR083G0750 Punica granatum HOM05D002849 ORTHO05D007186 4.7e-105 384.8 233 82.4
HanXRQChr17g0533361 Helianthus annuus HOM05D002849 ORTHO05D007186 6.1e-105 384.4 226 85.0
FAN27G2060 Fragaria x ananassa HOM05D002849 ORTHO05D007186 1.8e-104 382.9 229 84.7
Potri.005G083500 Populus trichocarpa HOM05D002849 ORTHO05D007186 1.8e-104 382.9 223 85.7
CiPaw.08G071100 Carya illinoinensis HOM05D002849 ORTHO05D007186 4.0e-104 381.7 233 82.8
Manes.08G142100 Manihot esculenta HOM05D002849 ORTHO05D007186 4.0e-104 381.7 230 82.2
Cc10_g00890 Coffea canephora HOM05D002849 ORTHO05D007186 8.8e-104 380.6 231 82.7
MBI08_g35553_MAGBIO Magnolia biondii HOM05D002849 ORTHO05D007186 8.8e-104 380.6 229 83.4
Sc02g0008960 Simmondsia chinensis HOM05D002849 ORTHO05D007186 8.8e-104 380.6 232 81.9
Ciclev10001644m.g Citrus clementina HOM05D002849 ORTHO05D007186 1.2e-103 380.2 231 81.4
THA.LOC104811452 Tarenaya hassleriana HOM05D002849 ORTHO05D007186 1.2e-103 380.2 232 81.9
CANSAT11G2551 Cannabis sativa HOM05D002849 ORTHO05D007186 2.0e-103 379.4 227 82.4
TWI56G0831 Tripterygium wilfordii HOM05D002849 ORTHO05D007186 2.0e-103 379.4 231 80.5
SGA_v2.0_scaffold19G08599 Striga asiatica HOM05D002849 ORTHO05D007186 3.4e-103 378.6 232 81.0
Eucgr.F03540 Eucalyptus grandis HOM05D002849 ORTHO05D007186 4.4e-103 378.3 232 81.9
AL2G36230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 5.7e-103 377.9 232 82.3
CSS0035799 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D007186 5.7e-103 377.9 233 82.0
Cfa017767 Carpinus fangiana HOM05D002849 ORTHO05D007186 5.7e-103 377.9 229 83.0
A07p41740 Brassica napus HOM05D002849 ORTHO05D007186 1.3e-102 376.7 234 80.3
CARHR069720 Cardamine hirsuta HOM05D002849 ORTHO05D007186 3.7e-102 375.2 232 81.5
Migut.N03194 Erythranthe guttata HOM05D002849 ORTHO05D007186 3.7e-102 375.2 230 80.9
Hund05132 Selenicereus undatus HOM05D002849 ORTHO05D007186 3.7e-102 375.2 225 82.2
ECA246G5259 Erigeron canadensis HOM05D002849 ORTHO05D007186 4.8e-102 374.8 223 85.2
Rhsim06G0009600 Rhododendron simsii HOM05D002849 ORTHO05D007186 4.8e-102 374.8 267 73.0
A05p04470 Brassica napus HOM05D002849 ORTHO05D007186 8.3e-102 374.0 233 79.8
BraA05t19423Z Brassica rapa HOM05D002849 ORTHO05D007186 8.3e-102 374.0 233 79.8
Thhalv10018770m.g Eutrema salsugineum HOM05D002849 ORTHO05D007186 8.3e-102 374.0 232 81.0
unitig_744.g24607 Utricularia gibba HOM05D002849 ORTHO05D007186 1.4e-101 373.2 219 83.6
HPP92_024207 Vanilla planifolia HOM05D002849 ORTHO05D007186 1.4e-101 373.2 229 81.2
Solyc08g074590.2 Solanum lycopersicum HOM05D002849 ORTHO05D007186 1.8e-101 372.9 226 81.4
Sopen08g023190 Solanum pennellii HOM05D002849 ORTHO05D007186 1.8e-101 372.9 226 81.4
Carub.0002s2306 Capsella rubella HOM05D002849 ORTHO05D007186 5.4e-101 371.3 232 80.2
Carub.0004s2686 Capsella rubella HOM05D002849 ORTHO05D007186 5.4e-101 371.3 228 81.6
Sp4g26340 Schrenkiella parvula HOM05D002849 ORTHO05D007186 7.0e-101 370.9 232 79.3
ATR0661G072 Amborella trichopoda HOM05D002849 ORTHO05D007186 9.1e-101 370.5 233 79.0
C04p05180 Brassica napus HOM05D002849 ORTHO05D007186 1.2e-100 370.2 233 79.4
MELO3C011328.2 Cucumis melo HOM05D002849 ORTHO05D007186 1.2e-100 370.2 231 78.8
Lsat_1_v5_gn_3_7661 Lactuca sativa HOM05D002849 ORTHO05D007186 2.0e-100 369.4 220 84.1
Lj4A14T52 Lonicera japonica HOM05D002849 ORTHO05D007186 2.0e-100 369.4 216 84.3
CsaV3_2G024550 Cucumis sativus L. HOM05D000201 ORTHO05D000490 2.7e-100 369.0 228 79.8
Aa31LG1G25890 Aethionema arabicum HOM05D002849 ORTHO05D007186 1.0e-99 367.1 229 80.8
Zm00001eb255730 Zea mays HOM05D002849 ORTHO05D007186 1.0e-99 367.1 230 79.1
AL4G43230 Arabidopsis lyrata HOM05D002849 ORTHO05D007186 1.3e-99 366.7 228 80.7
Os02g0762300 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 1.3e-99 366.7 224 80.4
AT2G44270 Arabidopsis thaliana HOM05D002849 ORTHO05D007186 1.7e-99 366.3 228 80.7
BraA07t31703Z Brassica rapa HOM05D002849 ORTHO05D007186 2.3e-99 365.9 247 76.1
PSO541G1452 Papaver somniferum HOM05D002849 ORTHO05D007186 2.9e-99 365.5 230 79.6
PSO675G6932 Papaver somniferum HOM05D002849 ORTHO05D007186 3.8e-99 365.2 229 79.5
Cfa014032 Carpinus fangiana HOM05D002849 ORTHO05D007186 1.5e-98 363.2 226 81.0
CARHR139450 Cardamine hirsuta HOM05D002849 ORTHO05D007186 2.5e-98 362.5 215 83.7
ClCG08G013910 Citrullus lanatus HOM05D002849 ORTHO05D007186 2.5e-98 362.5 229 79.0
Sed0011348 Sechium edule HOM05D002849 ORTHO05D007186 3.2e-98 362.1 232 78.0
BolC4t22158H Brassica oleracea HOM05D002849 ORTHO05D007186 1.2e-97 360.1 250 74.0
Hma1.2p1_1100F.1_g257100 Hydrangea macrophylla HOM05D002849 ORTHO05D007186 2.1e-97 359.4 228 80.3
Peaxi162Scf00166g00641 Petunia axillaris HOM05D002849 ORTHO05D007186 1.8e-96 356.3 230 78.7
Nitab4.5_0001131g0060 Nicotiana tabacum HOM05D002849 ORTHO05D007186 2.3e-96 355.9 226 79.2
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 4.0e-96 355.1 269 70.3
Ca_15284_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 1.5e-95 353.2 223 78.0
Ca_15420_v3 Cicer arietinum L. HOM05D002849 ORTHO05D007186 1.5e-95 353.2 223 78.0
Lj1g0000302 Lotus japonicus HOM05D002849 ORTHO05D007186 3.4e-95 352.1 216 79.6
Medtr3g118250 Medicago truncatula HOM05D002849 ORTHO05D007186 3.4e-95 352.1 218 78.9
Glyma.04G002200 Glycine max HOM05D002849 ORTHO05D007186 5.7e-95 351.3 223 76.2
Lalb_Chr23g0264921 Lupinus albus HOM05D002849 ORTHO05D007186 5.7e-95 351.3 228 75.0
Oeu046334.1 Olea europaea HOM05D002849 ORTHO05D007186 8.3e-94 347.4 202 84.7
C06p50120 Brassica napus HOM05D002849 ORTHO05D007186 5.4e-93 344.7 232 76.7
Phvul.009G117600 Phaseolus vulgaris HOM05D002849 ORTHO05D007186 2.7e-92 342.4 231 72.3
BcaB02g08806 Brassica carinata HOM05D002849 ORTHO05D007186 1.3e-91 340.1 223 76.7
DCAR_016752 Daucus carota HOM05D002022 ORTHO05D002056 1.3e-91 340.1 197 84.8
BcaNung06602 Brassica carinata HOM05D002849 ORTHO05D007186 1.1e-90 337.0 223 76.2
arahy.Tifrunner.gnm1.ann1.ID8SUW Arachis hypogaea HOM05D002849 ORTHO05D007186 1.9e-90 336.3 220 76.8
Mapoly0148s0040 Marchantia polymorpha HOM05D002849 ORTHO05D007186 4.7e-89 331.6 219 71.7
SMO118G0346 Selaginella moellendorffii HOM05D002849 ORTHO05D007186 2.3e-88 329.3 218 72.5
Os01g0598900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D007186 2.0e-87 326.2 197 80.7
Pp3c27_3320 Physcomitrium patens HOM05D002849 ORTHO05D007186 9.8e-87 323.9 218 72.0
EL10Ac2g04301 Beta vulgaris HOM05D002849 ORTHO05D007186 4.6e-84 315.1 195 81.5
SHI05854 Sapria himalayana HOM05D002849 ORTHO05D007186 2.3e-83 312.8 221 71.5
MD15G1004300 Malus domestica HOM05D002849 ORTHO05D007186 1.1e-82 310.5 204 77.9
AUR62013834 Chenopodium quinoa HOM05D002849 ORTHO05D007186 5.6e-82 308.1 200 76.5
BolC6t40052H Brassica oleracea HOM05D002849 ORTHO05D007186 3.6e-81 305.4 229 70.3
COL.COLO4_21615 Corchorus olitorius HOM05D002849 ORTHO05D007186 6.2e-81 304.7 192 81.2
BcaC08g47111 Brassica carinata HOM05D002849 ORTHO05D007186 1.4e-80 303.5 201 77.1
Cre16.g666100 Chlamydomonas reinhardtii HOM05D002849 ORTHO05D007186 1.2e-79 300.4 206 69.9
Sp5g31310 Schrenkiella parvula HOM05D002849 ORTHO05D007186 1.5e-79 300.1 229 71.2
BcaC08g47284 Brassica carinata HOM05D002849 ORTHO05D007186 3.4e-79 298.9 227 69.6
VMungo1309G1771 Vigna mungo HOM05D002849 ORTHO05D007186 7.5e-79 297.7 212 69.3
Ah.01g004180 Amaranthus hybridus HOM05D002849 ORTHO05D007186 1.9e-77 293.1 219 67.6
arahy.Tifrunner.gnm1.ann1.D80FKX Arachis hypogaea HOM05D002849 ORTHO05D007186 1.9e-77 293.1 205 73.7
CBR_g55299 Chara braunii HOM05D002849 ORTHO05D007186 3.2e-77 292.4 203 68.0
TPR.G36468 Trifolium pratense HOM05D002849 ORTHO05D007186 6.0e-76 288.1 222 67.6
HPP92_024246 Vanilla planifolia HOM05D002849 ORTHO05D007186 2.5e-74 282.7 179 79.9
AUR62036771 Chenopodium quinoa HOM05D002849 ORTHO05D007186 4.1e-69 265.4 169 79.3
Haze_27194 Corylus avellana HOM05D002849 ORTHO05D007186 3.0e-67 259.2 228 56.6
AagrBONN_evm.TU.Sc2ySwM_344.4630 Anthoceros agrestis HOM05D002849 ORTHO05D007186 5.1e-67 258.5 154 83.1
PRCOL_00001104 Prasinoderma coloniale HOM05D002849 ORTHO05D007186 1.1e-66 257.3 223 59.6
Cfa027047 Carpinus fangiana HOM05D002849 ORTHO05D007186 2.0e-63 246.5 217 57.1
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 5.1e-59 231.9 231 57.1
AT1G76170 Arabidopsis thaliana HOM05D002849 ORTHO05D007186 2.8e-49 199.5 111 87.4
Nitab4.5_0000907g0040 Nicotiana tabacum HOM05D002849 ORTHO05D007186 2.4e-48 196.4 193 59.1
VMungo1309G1925 Vigna mungo HOM05D002849 ORTHO05D007186 5.4e-45 185.3 198 52.5
Peaxi162Scf00445g00105 Petunia axillaris HOM05D002849 ORTHO05D007186 1.0e-43 181.0 154 64.3
SpUn0523_0010 Schrenkiella parvula HOM05D002849 ORTHO05D007186 5.8e-31 138.7 124 61.3
Prupe.3G237200 Prunus persica HOM05D002849 ORTHO05D007186 2.9e-30 136.3 83 81.9
Gorai.007G371200 Gossypium raimondii HOM05D002849 ORTHO05D047384 3.7e-25 119.4 74 71.6
MELO3C004787.2 Cucumis melo HOM05D002849 ORTHO05D007186 4.8e-25 119.0 72 77.8
MELO3C012882.2 Cucumis melo HOM05D002849 ORTHO05D007186 2.9e-22 109.8 74 73.0
Gohir.D11G341150 Gossypium hirsutum HOM05D002849 ORTHO05D047384 5.0e-22 109.0 71 70.4
Psat5g001160 Pisum sativum HOM05D002849 ORTHO05D007186 1.9e-21 107.1 94 59.6
FAN08G3136 Fragaria x ananassa HOM05D002849 ORTHO05D007186 2.7e-20 103.2 73 78.1
Lj9A176T24 Lonicera japonica HOM05D002849 ORTHO05D007186 4.6e-20 102.4 93 58.1
MELO3C034170.2 Cucumis melo HOM05D002849 ORTHO05D007186 1.3e-17 94.4 54 79.6
MELO3C003855.2 Cucumis melo HOM05D002849 ORTHO05D007186 1.7e-14 84.0 60 70.0
BcaB01g01492 Brassica carinata HOM05D002849 ORTHO05D027174 1.0e-06 58.2 32 81.2


User provided reference genes

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