Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0370 Trochodendron aralioides HOM05D005612 ORTHO05D007014 4.1e-39 164.1 74 100.0
Dinv43696 Davidia involucrata HOM05D005612 ORTHO05D007014 1.4e-26 122.5 63 90.5
TAR375G1134 Trochodendron aralioides HOM05D005612 ORTHO05D007014 1.4e-26 122.5 63 90.5
vmacro13411 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 3.1e-26 121.3 63 90.5
vmacro21020 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 3.1e-26 121.3 63 90.5
CSS0047351 Camellia sinensis var. sinensis HOM05D005612 ORTHO05D007014 4.0e-26 120.9 63 88.9
BcaB01g03271 Brassica carinata HOM05D005612 ORTHO05D007014 5.3e-26 120.6 72 75.0
CARHR140520 Cardamine hirsuta HOM05D005612 ORTHO05D007014 6.9e-26 120.2 72 75.0
AT2G45320 Arabidopsis thaliana HOM05D005612 ORTHO05D007014 9.0e-26 119.8 63 85.7
A03p25180 Brassica napus HOM05D005612 ORTHO05D007014 9.0e-26 119.8 72 75.0
BraA03t11718Z Brassica rapa HOM05D005612 ORTHO05D007014 9.0e-26 119.8 72 75.0
Haze_16797 Corylus avellana HOM05D005612 ORTHO05D007014 9.0e-26 119.8 63 87.3
Nn4g26368 Nelumbo nucifera HOM05D005612 ORTHO05D007014 9.0e-26 119.8 63 85.7
PSO339G2081 Papaver somniferum HOM05D005612 ORTHO05D007014 9.0e-26 119.8 63 87.3
Hma1.2p1_2025F.1_g311480 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 1.2e-25 119.4 63 87.3
BcaC01g05140 Brassica carinata HOM05D005612 ORTHO05D007014 2.0e-25 118.6 72 75.0
BolC3t15349H Brassica oleracea HOM05D005612 ORTHO05D007014 2.0e-25 118.6 72 75.0
Carub.0004s2795 Capsella rubella HOM05D005612 ORTHO05D007014 2.0e-25 118.6 63 84.1
Thhalv10001485m.g Eutrema salsugineum HOM05D005612 ORTHO05D007014 2.0e-25 118.6 63 84.1
QL08p052678 Quercus lobata HOM05D005612 ORTHO05D007014 2.0e-25 118.6 63 85.7
Actinidia12252 Actinidia chinensis HOM05D005612 ORTHO05D007014 2.6e-25 118.2 63 88.9
PSO384G4101 Papaver somniferum HOM05D005612 ORTHO05D007014 2.6e-25 118.2 63 85.7
GSVIVG01027677001 Vitis vinifera HOM05D005612 ORTHO05D007014 2.6e-25 118.2 63 85.7
Cpa.g.sc18.108 Carica papaya HOM05D005612 ORTHO05D007014 3.4e-25 117.9 63 85.7
C03p30020 Brassica napus HOM05D005612 ORTHO05D007014 4.4e-25 117.5 63 82.5
AL4G44420 Arabidopsis lyrata HOM05D005612 ORTHO05D007014 5.8e-25 117.1 63 82.5
CANSAT01G1400 Cannabis sativa HOM05D005612 ORTHO05D007014 5.8e-25 117.1 63 82.5
Lj7C530T5 Lonicera japonica HOM05D005612 ORTHO05D007014 5.8e-25 117.1 68 82.4
Cfa015219 Carpinus fangiana HOM05D005612 ORTHO05D007014 7.6e-25 116.7 63 85.7
Atru.chr2.2479 Acer truncatum HOM05D005612 ORTHO05D007014 9.9e-25 116.3 63 85.7
TWI14G1300 Tripterygium wilfordii HOM05D005612 ORTHO05D007014 1.3e-24 115.9 63 82.5
CAN.G530.1 Capsicum annuum HOM05D005612 ORTHO05D007014 1.7e-24 115.5 63 82.5
Hma1.2p1_0511F.1_g169190 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 1.7e-24 115.5 63 85.7
Potri.014G068500 Populus trichocarpa HOM05D005612 ORTHO05D007014 1.7e-24 115.5 63 85.7
Rhsim01G0149000 Rhododendron simsii HOM05D005612 ORTHO05D007014 1.7e-24 115.5 62 85.5
Sp4g27340 Schrenkiella parvula HOM05D005612 ORTHO05D007014 1.7e-24 115.5 63 82.5
THA.LOC104827614 Tarenaya hassleriana HOM05D005612 ORTHO05D007014 1.7e-24 115.5 63 84.1
Aqoxy1G04104 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 2.2e-24 115.2 63 82.5
Aqoxy3G02061 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 2.2e-24 115.2 63 82.5
CiPaw.01G263000 Carya illinoinensis HOM05D005612 ORTHO05D007014 2.2e-24 115.2 63 84.1
COL.COLO4_12531 Corchorus olitorius HOM05D005612 ORTHO05D007014 2.2e-24 115.2 63 81.0
MD00G1094900 Malus domestica HOM05D005612 ORTHO05D007014 2.2e-24 115.2 72 72.2
Lalb_Chr03g0039601 Lupinus albus HOM05D005612 ORTHO05D007014 2.9e-24 114.8 63 82.5
CsaV3_3G009760 Cucumis sativus L. HOM05D005612 ORTHO05D007014 3.8e-24 114.4 63 81.0
RcHm_v2.0_Chr3g0497141 Rosa chinensis HOM05D005612 ORTHO05D007014 3.8e-24 114.4 63 79.4
Ciclev10010228m.g Citrus clementina HOM05D005612 ORTHO05D007014 4.9e-24 114.0 63 82.5
FAN23G2738 Fragaria x ananassa HOM05D005612 ORTHO05D007014 4.9e-24 114.0 63 79.4
Nitab4.5_0000264g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 4.9e-24 114.0 63 82.5
Hund07502 Selenicereus undatus HOM05D005612 ORTHO05D007014 6.4e-24 113.6 63 79.4
Solyc08g006610.3 Solanum lycopersicum HOM05D005612 ORTHO05D007014 6.4e-24 113.6 63 81.0
Sopen08g002560 Solanum pennellii HOM05D005612 ORTHO05D007014 6.4e-24 113.6 63 81.0
Aa31LG1G26830 Aethionema arabicum HOM05D005612 ORTHO05D007014 8.4e-24 113.2 63 81.0
Migut.B01623 Erythranthe guttata HOM05D005612 ORTHO05D007014 8.4e-24 113.2 63 81.0
FvH4_1g28100 Fragaria vesca HOM05D005612 ORTHO05D007014 8.4e-24 113.2 63 77.8
FAN19G0199 Fragaria x ananassa HOM05D005612 ORTHO05D007014 8.4e-24 113.2 63 77.8
Oeu055499.1 Olea europaea HOM05D005612 ORTHO05D007014 1.1e-23 112.8 63 82.5
AUR62019310 Chenopodium quinoa HOM05D005612 ORTHO05D007014 1.4e-23 112.5 63 79.4
DCAR_008555 Daucus carota HOM05D005612 ORTHO05D007014 1.4e-23 112.5 63 84.1
Duzib138G0844 Durio zibethinus HOM05D005612 ORTHO05D007014 1.4e-23 112.5 63 81.0
Duzib138G1608 Durio zibethinus HOM05D005612 ORTHO05D007014 1.4e-23 112.5 63 81.0
FAN26G0204 Fragaria x ananassa HOM05D005612 ORTHO05D007014 1.4e-23 112.5 63 77.8
FAN28G0581 Fragaria x ananassa HOM05D005612 ORTHO05D007014 1.4e-23 112.5 63 77.8
FAN28G2973 Fragaria x ananassa HOM05D005612 ORTHO05D007014 1.4e-23 112.5 63 77.8
Gohir.A08G135500 Gossypium hirsutum HOM05D005612 ORTHO05D007014 1.4e-23 112.5 63 81.0
Gohir.D08G156300 Gossypium hirsutum HOM05D005612 ORTHO05D007014 1.4e-23 112.5 63 81.0
Gorai.004G162600 Gossypium raimondii HOM05D005612 ORTHO05D007014 1.4e-23 112.5 63 81.0
SalBow5G3218 Salvia bowleyana HOM05D005612 ORTHO05D007014 1.4e-23 112.5 72 73.6
Thecc.01G378200 Theobroma cacao HOM05D005612 ORTHO05D007014 1.4e-23 112.5 63 81.0
Ah.04g161950 Amaranthus hybridus HOM05D004275 ORTHO05D005720 1.9e-23 112.1 63 81.0
Lalb_Chr01g0021461 Lupinus albus HOM05D005612 ORTHO05D007014 1.9e-23 112.1 71 74.6
Manes.05G046700 Manihot esculenta HOM05D005612 ORTHO05D007014 1.9e-23 112.1 63 82.5
Peaxi162Scf00045g01936 Petunia axillaris HOM05D005612 ORTHO05D007014 1.9e-23 112.1 62 80.6
ClCG05G002330 Citrullus lanatus HOM05D005612 ORTHO05D007014 2.4e-23 111.7 63 79.4
Eucgr.E01443 Eucalyptus grandis HOM05D005612 ORTHO05D007014 2.4e-23 111.7 63 81.0
Prupe.6G155400 Prunus persica HOM05D005612 ORTHO05D007014 2.4e-23 111.7 63 81.0
EL10Ac4g10240 Beta vulgaris HOM05D005612 ORTHO05D007014 3.2e-23 111.3 63 81.0
AUR62000130 Chenopodium quinoa HOM05D005612 ORTHO05D007014 3.2e-23 111.3 63 77.8
Manes.01G266600 Manihot esculenta HOM05D005612 ORTHO05D007014 5.4e-23 110.5 63 82.5
PGR042G0232 Punica granatum HOM05D005612 ORTHO05D007014 5.4e-23 110.5 63 79.4
Lsat_1_v5_gn_8_86120 Lactuca sativa HOM05D005612 ORTHO05D007014 7.1e-23 110.2 63 79.4
Nitab4.5_0005450g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 7.1e-23 110.2 63 81.0
Glyma.12G134000 Glycine max HOM05D005612 ORTHO05D007014 9.3e-23 109.8 63 79.4
Lj3g0004128 Lotus japonicus HOM05D005612 ORTHO05D007014 1.2e-22 109.4 63 79.4
arahy.Tifrunner.gnm1.ann1.39QM8U Arachis hypogaea HOM05D005612 ORTHO05D007014 1.6e-22 109.0 72 70.8
arahy.Tifrunner.gnm1.ann1.Q1YE57 Arachis hypogaea HOM05D005612 ORTHO05D007014 1.6e-22 109.0 72 70.8
MSTRG.17178 Avicennia marina HOM05D005612 ORTHO05D007014 1.6e-22 109.0 63 79.4
MSTRG.28297 Avicennia marina HOM05D005612 ORTHO05D007014 1.6e-22 109.0 63 79.4
Lsat_1_v5_gn_7_9741 Lactuca sativa HOM05D005612 ORTHO05D007014 1.6e-22 109.0 62 80.6
Medtr4g053430 Medicago truncatula HOM05D005612 ORTHO05D007014 1.6e-22 109.0 63 77.8
TPR.G17234 Trifolium pratense HOM05D005612 ORTHO05D007014 1.6e-22 109.0 63 77.8
HanXRQChr04g0122751 Helianthus annuus HOM05D005612 ORTHO05D007014 2.1e-22 108.6 62 80.6
Phvul.011G138100 Phaseolus vulgaris HOM05D005612 ORTHO05D007014 2.7e-22 108.2 63 79.4
Sed0014004 Sechium edule HOM05D005612 ORTHO05D007014 2.7e-22 108.2 63 77.8
VMungo1127G0102 Vigna mungo HOM05D005612 ORTHO05D007014 2.7e-22 108.2 63 76.2
Zm00001eb195050 Zea mays HOM05D005612 ORTHO05D007014 2.7e-22 108.2 71 70.4
Psat0s2995g0040 Pisum sativum HOM05D005612 ORTHO05D007014 3.5e-22 107.8 63 77.8
Cc02_g24020 Coffea canephora HOM05D005612 ORTHO05D007014 4.6e-22 107.5 62 79.0
ECA236G2759 Erigeron canadensis HOM05D005612 ORTHO05D007014 4.6e-22 107.5 62 79.0
Ca_19396_v3 Cicer arietinum L. HOM05D005612 ORTHO05D007014 6.0e-22 107.1 63 76.2
unitig_749.g14376 Utricularia gibba HOM05D005612 ORTHO05D007014 1.0e-21 106.3 63 76.2
unitig_76.g29085 Utricularia gibba HOM05D005612 ORTHO05D007014 1.0e-21 106.3 63 76.2
Glyma.06G270700 Glycine max HOM05D005612 ORTHO05D007014 1.3e-21 105.9 63 76.2
Medtr8g102040 Medicago truncatula HOM05D005612 ORTHO05D007014 1.1e-20 102.8 56 82.1
CiPaw.09G176500 Carya illinoinensis HOM05D005612 ORTHO05D007014 2.1e-19 98.6 63 68.3
Zm00001eb249030 Zea mays HOM05D005612 ORTHO05D007014 2.8e-19 98.2 64 71.9
Zm00001eb270960 Zea mays HOM05D005612 ORTHO05D002685 2.8e-19 98.2 64 71.9
SMO119G0175 Selaginella moellendorffii HOM05D005612 ORTHO05D007014 2.6e-17 91.7 62 64.5
Sc16g0011470 Simmondsia chinensis HOM05D005612 ORTHO05D007014 3.4e-17 91.3 45 84.4
Sabra14G0048200 Salix brachista HOM05D005612 ORTHO05D007014 9.9e-17 89.7 47 80.9
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 3.8e-16 87.8 44 81.8
ATR1100G025 Amborella trichopoda HOM05D005612 ORTHO05D007014 1.4e-15 85.9 44 81.8
ATR0686G054 Amborella trichopoda HOM05D005612 ORTHO05D007014 9.3e-15 83.2 44 77.3
CDE07G1659 Ceratophyllum demersum HOM05D005612 ORTHO05D007014 4.6e-14 80.9 44 75.0
MBI14_g08144_MAGBIO Magnolia biondii HOM05D005612 ORTHO05D007014 7.9e-14 80.1 62 67.7
Zm00001eb012290 Zea mays HOM05D005612 ORTHO05D007014 2.3e-13 78.6 44 70.5
Glyma.20G076400 Glycine max HOM05D005612 ORTHO05D007014 3.0e-13 78.2 45 71.1
Pp3c17_6010 Physcomitrium patens HOM05D005612 ORTHO05D007014 3.9e-13 77.8 45 73.3
AagrBONN_evm.TU.Sc2ySwM_117.669 Anthoceros agrestis HOM05D005612 ORTHO05D007014 3.7e-11 71.2 45 64.4
MELO3C006197.2 Cucumis melo HOM05D005612 ORTHO05D007014 1.2e-09 66.2 34 76.5
Oeu011925.1 Olea europaea HOM05D005612 ORTHO05D007014 1.7e-08 62.4 35 77.1


User provided reference genes

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