Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 2.6e-188 662.1 397 100.0
TAR539G0001 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.2e-73 281.2 165 97.6
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 6.2e-73 278.9 269 62.1
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 2.1e-68 263.8 408 43.9
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 2.3e-51 207.2 435 40.9
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 1.1e-48 198.4 419 40.3
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.9e-42 177.6 396 38.9
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 1.3e-38 164.9 410 32.4
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 3.8e-38 163.3 420 32.6
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 1.1e-37 161.8 417 38.4
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 1.2e-36 158.3 399 33.8
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 6.7e-35 152.5 406 32.8
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 1.5e-34 151.4 315 36.8
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 2.5e-34 150.6 283 43.8
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 2.5e-34 150.6 423 35.9
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 1.3e-33 148.3 384 31.8
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 1.6e-33 147.9 373 31.4
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 3.7e-33 146.7 414 32.4
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 1.0e-30 138.7 414 29.7
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 1.3e-30 138.3 481 29.7
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.7e-30 137.9 425 31.8
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 2.9e-30 137.1 397 33.2
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 5.0e-30 136.3 428 32.5
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 1.1e-29 135.2 409 29.8
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 7.2e-29 132.5 377 35.5
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 4.6e-28 129.8 374 32.1
Actinidia38316 Actinidia chinensis HOM05D003426 ORTHO05D003816 6.1e-28 129.4 387 34.1
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 6.1e-28 129.4 401 30.9
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 1.8e-27 127.9 244 43.0
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 1.8e-27 127.9 382 34.6
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 3.0e-27 127.1 423 29.8
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 3.9e-27 126.7 353 30.0
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 3.9e-27 126.7 430 30.2
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 2.0e-26 124.4 363 32.0
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 2.5e-26 124.0 349 36.7
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 7.4e-26 122.5 398 26.6
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 9.7e-26 122.1 424 30.4
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.1e-24 118.6 460 30.7
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 1.1e-24 118.6 244 42.6
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 1.8e-24 117.9 339 33.0
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 3.1e-24 117.1 350 30.9
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 1.5e-23 114.8 436 32.8
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 2.6e-23 114.0 407 29.2
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 3.4e-23 113.6 351 31.6
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 5.9e-23 112.8 350 30.3
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 7.7e-23 112.5 422 27.0
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 1.3e-22 111.7 339 29.8
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 1.7e-22 111.3 350 30.0
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 6.5e-22 109.4 253 35.6
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 6.5e-22 109.4 401 28.7
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 8.5e-22 109.0 422 27.0
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 1.1e-21 108.6 401 28.9
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.4e-21 108.2 408 29.2
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 3.2e-21 107.1 213 35.7
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 3.2e-21 107.1 369 30.9
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 2.7e-20 104.0 344 29.9
vmacro06066 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 3.6e-20 103.6 223 38.1
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 4.7e-20 103.2 231 32.9
Dinv08190 Davidia involucrata HOM05D003426 ORTHO05D003816 2.3e-19 100.9 381 29.9
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 2.3e-19 100.9 397 28.5
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 3.0e-19 100.5 389 28.3
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 3.0e-19 100.5 533 24.6
Actinidia10526 Actinidia chinensis HOM05D003426 ORTHO05D003816 8.8e-19 99.0 405 27.7
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 2.0e-18 97.8 249 33.7
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 5.7e-18 96.3 333 28.8
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 1.7e-17 94.7 292 29.8
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 2.2e-17 94.4 174 35.1
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 8.2e-17 92.4 410 32.4
CSS0027727 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 4.1e-16 90.1 189 39.7
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 4.1e-16 90.1 229 32.3
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 9.1e-16 89.0 414 26.8
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 9.1e-16 89.0 96 51.0
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 3.5e-15 87.0 340 26.2
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 5.9e-15 86.3 326 28.5
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 2.9e-14 84.0 416 26.7
DCAR_019401 Daucus carota HOM05D003426 ORTHO05D003816 1.1e-13 82.0 208 34.1
Actinidia01424 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.5e-13 81.6 194 41.2
Nn1g05634 Nelumbo nucifera HOM05D000650 ORTHO05D000735 1.9e-13 81.3 182 31.9
MELO3C010212.2 Cucumis melo HOM05D003426 ORTHO05D003816 2.5e-13 80.9 298 27.5
Sed0021282 Sechium edule HOM05D003426 ORTHO05D003816 2.5e-13 80.9 204 31.9
THA.LOC104803917 Tarenaya hassleriana HOM05D003426 ORTHO05D003816 5.5e-13 79.7 342 25.4
Lj4g0006994 Lotus japonicus HOM05D003426 ORTHO05D003816 2.1e-12 77.8 345 26.4
CsaV3_2G007580 Cucumis sativus L. HOM05D003426 ORTHO05D003816 2.7e-12 77.4 336 29.5
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 3.6e-12 77.0 101 45.5
ClCG06G012490 Citrullus lanatus HOM05D003426 ORTHO05D003816 3.6e-12 77.0 348 27.0
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 3.6e-12 77.0 181 31.5
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 8.0e-12 75.9 102 48.0
RcHm_v2.0_Chr2g0085511 Rosa chinensis HOM05D003426 ORTHO05D003816 8.0e-12 75.9 361 28.3
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 1.0e-11 75.5 200 34.0
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 1.0e-11 75.5 200 34.0
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 1.0e-11 75.5 413 24.5
FAN23G3106 Fragaria x ananassa HOM05D003426 ORTHO05D003816 1.4e-11 75.1 240 34.6
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 1.4e-11 75.1 185 28.6
CiPaw.16G108200 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.8e-11 74.7 244 35.7
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 1.8e-11 74.7 117 42.7
Glyma.02G205001 Glycine max HOM05D003426 ORTHO05D003816 3.0e-11 73.9 203 29.1
ClCG02G014420 Citrullus lanatus HOM05D003426 ORTHO05D003816 5.2e-11 73.2 349 24.6
Dinv17422 Davidia involucrata HOM05D003426 ORTHO05D003816 5.2e-11 73.2 220 31.4
Phvul.002G214600 Phaseolus vulgaris HOM05D000650 ORTHO05D007302 5.2e-11 73.2 193 30.6
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 6.7e-11 72.8 195 28.2
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 6.7e-11 72.8 187 28.3
PGSC0003DMG400037110 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.0e-10 71.2 178 28.1
Actinidia02402 Actinidia chinensis HOM05D000650 ORTHO05D007302 3.3e-10 70.5 163 28.2
AUR62024799 Chenopodium quinoa HOM05D016866 ORTHO05D003816 3.3e-10 70.5 329 33.1
Dinv24138 Davidia involucrata HOM05D000650 ORTHO05D007302 5.7e-10 69.7 170 28.2
FvH4_1g00800 Fragaria vesca HOM05D003426 ORTHO05D003816 5.7e-10 69.7 221 35.7
FAN26G0769 Fragaria x ananassa HOM05D003426 ORTHO05D003816 5.7e-10 69.7 239 35.1
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 1.3e-09 68.6 100 43.0
Rhsim02G0212600 Rhododendron simsii HOM05D003426 ORTHO05D003816 1.7e-09 68.2 315 25.1
MELO3C004128.2 Cucumis melo HOM05D003426 ORTHO05D003816 2.2e-09 67.8 353 26.3
GSVIVG01023627001 Vitis vinifera HOM05D003426 ORTHO05D003816 2.2e-09 67.8 183 38.8
SalBow1G0569 Salvia bowleyana HOM05D003426 ORTHO05D003816 2.8e-09 67.4 330 25.8
Haze_10696 Corylus avellana HOM05D000650 ORTHO05D007302 4.8e-09 66.6 167 29.3
PSO675G1450 Papaver somniferum HOM05D003426 ORTHO05D003816 4.8e-09 66.6 65 52.3
TAR625G0266 Trochodendron aralioides HOM05D000650 ORTHO05D003816 4.8e-09 66.6 148 29.1
Sed0023941 Sechium edule HOM05D003426 ORTHO05D003816 6.3e-09 66.2 177 28.8
Hund02984 Selenicereus undatus HOM05D016866 ORTHO05D015160 6.3e-09 66.2 157 28.7
CSS0012807 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 8.2e-09 65.9 63 57.1
Migut.J01365 Erythranthe guttata HOM05D003426 ORTHO05D003816 8.2e-09 65.9 321 28.0
Peaxi162Scf00003g03237 Petunia axillaris HOM05D021013 ORTHO05D007302 1.1e-08 65.5 148 27.7
VMungo1215G0444 Vigna mungo HOM05D003426 ORTHO05D003816 1.4e-08 65.1 153 29.4
Actinidia14135 Actinidia chinensis HOM05D022929 ORTHO05D003816 1.8e-08 64.7 229 27.9
Lj4g0018033 Lotus japonicus HOM05D000650 ORTHO05D007302 1.8e-08 64.7 189 27.0
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 1.8e-08 64.7 87 41.4
Glyma.08G066700 Glycine max HOM05D000650 ORTHO05D007302 2.4e-08 64.3 203 29.1
HanXRQChr10g0313661 Helianthus annuus HOM05D003426 ORTHO05D003816 3.1e-08 63.9 158 35.4
Lalb_Chr13g0300811 Lupinus albus HOM05D003426 ORTHO05D003816 3.1e-08 63.9 290 25.2
Lsat_1_v5_gn_5_90301 Lactuca sativa HOM05D003426 ORTHO05D003816 4.1e-08 63.5 300 23.7
Nitab4.5_0000123g0610 Nicotiana tabacum HOM05D003426 ORTHO05D007302 4.1e-08 63.5 207 26.6
Dinv24137 Davidia involucrata HOM05D000650 ORTHO05D007302 7.0e-08 62.8 159 42.1
Lj4g0012325 Lotus japonicus HOM05D000650 ORTHO05D007302 7.0e-08 62.8 98 37.8
Lj4g0020470 Lotus japonicus HOM05D000650 ORTHO05D007302 7.0e-08 62.8 98 37.8
VMungo0251G0586 Vigna mungo HOM05D000650 ORTHO05D007302 7.0e-08 62.8 195 28.7
Haze_10697 Corylus avellana HOM05D000650 ORTHO05D007302 9.1e-08 62.4 182 28.6
Lj4g0020146 Lotus japonicus HOM05D000650 ORTHO05D007302 9.1e-08 62.4 202 24.3
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 9.1e-08 62.4 103 39.8
Nitab4.5_0004586g0030 Nicotiana tabacum HOM05D000650 ORTHO05D007302 9.1e-08 62.4 140 29.3
QL02p018769 Quercus lobata HOM05D003426 ORTHO05D003816 9.1e-08 62.4 152 46.7
arahy.Tifrunner.gnm1.ann1.H6N2T4 Arachis hypogaea HOM05D003426 ORTHO05D003816 1.2e-07 62.0 324 25.6
Sed0017290 Sechium edule HOM05D003426 ORTHO05D003816 1.2e-07 62.0 91 38.5
TAR381G0504 Trochodendron aralioides HOM05D000650 ORTHO05D000735 1.2e-07 62.0 180 28.9
CSS0023548 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D007302 1.6e-07 61.6 160 25.6
Os06g0651300 Oryza sativa ssp. japonica HOM05D003426 ORTHO05D003816 1.6e-07 61.6 132 31.1
QL02p018764 Quercus lobata HOM05D003426 ORTHO05D003816 1.6e-07 61.6 153 30.1
Cpa.g.sc20.26 Carica papaya HOM05D000650 ORTHO05D000735 2.0e-07 61.2 167 27.5
ATR0580G137 Amborella trichopoda HOM05D003426 ORTHO05D003816 2.6e-07 60.8 175 29.7
Phvul.008G183100 Phaseolus vulgaris HOM05D000650 ORTHO05D010020 2.6e-07 60.8 49 65.3
Psat4g009680 Pisum sativum HOM05D003426 ORTHO05D003816 2.6e-07 60.8 80 42.5
Psat4g010040 Pisum sativum HOM05D003426 ORTHO05D003816 2.6e-07 60.8 100 41.0
Psat6g228520 Pisum sativum HOM05D003426 ORTHO05D003816 2.6e-07 60.8 80 45.0
PGSC0003DMG400036381 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.6e-07 60.8 287 23.3
Zm00001eb388770 Zea mays HOM05D003426 ORTHO05D003816 2.6e-07 60.8 154 29.9
AUR62032422 Chenopodium quinoa HOM05D016866 ORTHO05D003816 3.5e-07 60.5 69 44.9
Solyc10g048140.2 Solanum lycopersicum HOM05D003426 ORTHO05D003816 3.5e-07 60.5 167 26.9
PGSC0003DMG400040189 Solanum tuberosum HOM05D003426 ORTHO05D003816 4.5e-07 60.1 168 26.8
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 5.9e-07 59.7 190 28.4
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 5.9e-07 59.7 92 38.0
PGSC0003DMG400038550 Solanum tuberosum HOM05D003426 ORTHO05D003816 5.9e-07 59.7 71 42.3
FAN28G0527 Fragaria x ananassa HOM05D003426 ORTHO05D003816 7.7e-07 59.3 94 39.4
Sc18g0002970 Simmondsia chinensis HOM05D003426 ORTHO05D003816 7.7e-07 59.3 326 28.8
vmacro01872 Vaccinium macrocarpon HOM05D000650 ORTHO05D007302 7.7e-07 59.3 170 24.7
PGSC0003DMG400040160 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.0e-06 58.9 310 27.1
arahy.Tifrunner.gnm1.ann1.N5DK6E Arachis hypogaea HOM05D003426 ORTHO05D003816 1.3e-06 58.5 324 25.3
Medtr4g093260 Medicago truncatula HOM05D000650 ORTHO05D007302 1.3e-06 58.5 135 34.1
Rhsim11G0141300 Rhododendron simsii HOM05D000650 ORTHO05D007302 1.3e-06 58.5 160 45.0
TPR.G20268 Trifolium pratense HOM05D000650 ORTHO05D007302 1.3e-06 58.5 138 31.9
Nitab4.5_0011705g0030 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.7e-06 58.2 63 49.2
Rhsim11G0141400 Rhododendron simsii HOM05D002143 ORTHO05D002260 2.2e-06 57.8 80 42.5
Sopen10g019310 Solanum pennellii HOM05D003426 ORTHO05D003816 2.2e-06 57.8 162 25.9
Lj5A228T44 Lonicera japonica HOM05D003426 ORTHO05D007302 2.9e-06 57.4 161 25.5
Psat7g102080 Pisum sativum HOM05D000650 ORTHO05D007302 2.9e-06 57.4 259 25.5
Rhsim11G0141100 Rhododendron simsii HOM05D000650 ORTHO05D007302 2.9e-06 57.4 164 27.4
Rhsim11G0141200 Rhododendron simsii HOM05D000650 ORTHO05D007302 2.9e-06 57.4 151 27.8
GSVIVG01016047001 Vitis vinifera HOM05D003426 ORTHO05D003816 2.9e-06 57.4 63 47.6
Rhsim11G0142600 Rhododendron simsii HOM05D002143 ORTHO05D338981 3.8e-06 57.0 66 47.0
SGA_v2.0_scaffold1435G53950 Striga asiatica HOM05D003426 ORTHO05D003816 3.8e-06 57.0 232 22.4
TPR.G30873 Trifolium pratense HOM05D000650 ORTHO05D010020 3.8e-06 57.0 41 63.4
vmacro01871 Vaccinium macrocarpon HOM05D000650 ORTHO05D007302 3.8e-06 57.0 159 25.8
QL09p018396 Quercus lobata HOM05D000650 ORTHO05D010020 5.0e-06 56.6 40 65.0
Manes.05G189300 Manihot esculenta HOM05D000650 ORTHO05D010020 8.5e-06 55.8 40 60.0
PGSC0003DMG400011188 Solanum tuberosum HOM05D003426 ORTHO05D003816 8.5e-06 55.8 112 36.6


User provided reference genes

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