Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR624G0632 Trochodendron aralioides HOM05D003148 ORTHO05D003894 1.1e-92 343.2 167 100.0
Sabra16G0286100 Salix brachista HOM05D003148 ORTHO05D003894 6.9e-66 254.2 139 87.8
TAR624G0080 Trochodendron aralioides HOM05D003148 ORTHO05D003894 1.7e-64 249.6 133 91.0
Potri.001G421300 Populus trichocarpa HOM05D003148 ORTHO05D003894 2.9e-64 248.8 133 90.2
TAR626G0592 Trochodendron aralioides HOM05D003148 ORTHO05D003894 1.4e-63 246.5 133 89.5
Potri.011G136900 Populus trichocarpa HOM05D003148 ORTHO05D003894 1.9e-63 246.1 133 88.0
Rhsim06G0215400 Rhododendron simsii HOM05D003148 ORTHO05D003894 3.2e-63 245.4 133 88.7
Hma1.2p1_0938F.1_g239220 Hydrangea macrophylla HOM05D003148 ORTHO05D003894 4.2e-63 245.0 133 88.0
Nn1g07107 Nelumbo nucifera HOM05D003148 ORTHO05D003894 4.2e-63 245.0 133 89.5
Rhsim04G0002300 Rhododendron simsii HOM05D003148 ORTHO05D003894 4.2e-63 245.0 133 89.5
RhsimUnG0252100 Rhododendron simsii HOM05D003148 ORTHO05D003894 4.2e-63 245.0 133 89.5
MBI02_g28334_MAGBIO Magnolia biondii HOM05D003148 ORTHO05D003894 5.4e-63 244.6 133 88.7
Sabra11G0122800 Salix brachista HOM05D003148 ORTHO05D003894 5.4e-63 244.6 133 87.2
Cfa020382 Carpinus fangiana HOM05D003148 ORTHO05D003894 9.3e-63 243.8 133 88.0
Prupe.4G209500 Prunus persica HOM05D003148 ORTHO05D003894 1.2e-62 243.4 133 86.5
arahy.Tifrunner.gnm1.ann1.IVZB0M Arachis hypogaea HOM05D003148 ORTHO05D003894 2.7e-62 242.3 133 88.0
CSS0045288 Camellia sinensis var. sinensis HOM05D003148 ORTHO05D003894 2.7e-62 242.3 133 88.0
vmacro11740 Vaccinium macrocarpon HOM05D003148 ORTHO05D003894 2.7e-62 242.3 133 87.2
Actinidia35330 Actinidia chinensis HOM05D003148 ORTHO05D003894 3.5e-62 241.9 133 88.0
arahy.Tifrunner.gnm1.ann1.5UV8SN Arachis hypogaea HOM05D003148 ORTHO05D003894 3.5e-62 241.9 133 87.2
Lalb_Chr18g0049911 Lupinus albus HOM05D003148 ORTHO05D003894 3.5e-62 241.9 133 87.2
CiPaw.11G187400 Carya illinoinensis HOM05D003148 ORTHO05D003894 4.6e-62 241.5 133 87.2
CiPaw.12G128200 Carya illinoinensis HOM05D003148 ORTHO05D003894 4.6e-62 241.5 133 87.2
Nn1g03580 Nelumbo nucifera HOM05D003148 ORTHO05D003894 4.6e-62 241.5 133 88.7
Cc05_g13530 Coffea canephora HOM05D003148 ORTHO05D003894 6.0e-62 241.1 133 88.0
Lj1C869T19 Lonicera japonica HOM05D003148 ORTHO05D003894 6.0e-62 241.1 133 86.5
Cpa.g.sc97.33 Carica papaya HOM05D003148 ORTHO05D003894 7.9e-62 240.7 133 85.7
CDE05G0870 Ceratophyllum demersum HOM05D003148 ORTHO05D003894 7.9e-62 240.7 130 88.5
Lj8A168T100 Lonicera japonica HOM05D003148 ORTHO05D003894 7.9e-62 240.7 133 87.2
ATR0752G224 Amborella trichopoda HOM05D003148 ORTHO05D003894 1.3e-61 240.0 130 88.5
Glyma.02G289700 Glycine max HOM05D003148 ORTHO05D003894 1.3e-61 240.0 133 86.5
arahy.Tifrunner.gnm1.ann1.FV4ICK Arachis hypogaea HOM05D003148 ORTHO05D003894 1.8e-61 239.6 133 85.7
arahy.Tifrunner.gnm1.ann1.SAW44B Arachis hypogaea HOM05D003148 ORTHO05D003894 1.8e-61 239.6 133 85.7
Phvul.006G039400 Phaseolus vulgaris HOM05D003148 ORTHO05D003894 1.8e-61 239.6 133 86.5
Gohir.D01G065200 Gossypium hirsutum HOM05D003148 ORTHO05D003894 2.3e-61 239.2 133 86.5
Gorai.002G086900 Gossypium raimondii HOM05D003148 ORTHO05D003894 2.3e-61 239.2 133 86.5
Lj6g0019529 Lotus japonicus HOM05D003148 ORTHO05D003894 2.3e-61 239.2 133 86.5
Atru.chr2.3280 Acer truncatum HOM05D003148 ORTHO05D003894 3.0e-61 238.8 130 88.5
COL.COLO4_09635 Corchorus olitorius HOM05D003148 ORTHO05D003894 3.0e-61 238.8 133 86.5
Thecc.07G043600 Theobroma cacao HOM05D003148 ORTHO05D003894 3.0e-61 238.8 133 86.5
Lj4g0014990 Lotus japonicus HOM05D003148 ORTHO05D003894 3.9e-61 238.4 133 86.5
Gohir.A01G078100 Gossypium hirsutum HOM05D003148 ORTHO05D003894 5.1e-61 238.0 133 85.7
Ca_06307_v3 Cicer arietinum L. HOM05D003148 ORTHO05D003894 6.7e-61 237.7 133 85.0
Duzib213G0065 Durio zibethinus HOM05D003148 ORTHO05D003894 6.7e-61 237.7 133 85.7
Lalb_Chr04g0248571 Lupinus albus HOM05D003148 ORTHO05D003894 6.7e-61 237.7 133 85.0
Aqoxy1G03292 Aquilegia oxysepala HOM05D003148 ORTHO05D003894 8.7e-61 237.3 133 86.5
DCAR_022553 Daucus carota HOM05D003148 ORTHO05D003894 8.7e-61 237.3 130 88.5
Dinv40737 Davidia involucrata HOM05D003148 ORTHO05D003894 8.7e-61 237.3 128 89.8
Phvul.008G265700 Phaseolus vulgaris HOM05D003148 ORTHO05D003894 8.7e-61 237.3 133 85.0
Actinidia09911 Actinidia chinensis HOM05D003148 ORTHO05D003894 1.1e-60 236.9 130 86.9
Glyma.14G025300 Glycine max HOM05D003148 ORTHO05D003894 1.1e-60 236.9 133 85.7
Medtr5g092100 Medicago truncatula HOM05D003148 ORTHO05D003894 1.1e-60 236.9 128 87.5
Psat5g183240 Pisum sativum HOM05D003148 ORTHO05D003894 1.1e-60 236.9 133 85.7
GSVIVG01014163001 Vitis vinifera HOM05D003148 ORTHO05D003894 1.1e-60 236.9 133 85.7
CsaV3_3G005270 Cucumis sativus L. HOM05D003148 ORTHO05D003894 1.5e-60 236.5 130 88.5
Nitab4.5_0013016g0020 Nicotiana tabacum HOM05D003148 ORTHO05D003894 1.5e-60 236.5 133 85.7
ClCG10G005550 Citrullus lanatus HOM05D003148 ORTHO05D003894 1.9e-60 236.1 128 89.1
Manes.14G165664 Manihot esculenta HOM05D003148 ORTHO05D003894 1.9e-60 236.1 133 85.7
QL08p011843 Quercus lobata HOM05D003148 ORTHO05D003894 1.9e-60 236.1 133 84.2
PGR083G0390 Punica granatum HOM05D003148 ORTHO05D003894 2.5e-60 235.7 133 85.0
TWI38G0810 Tripterygium wilfordii HOM05D003148 ORTHO05D003894 2.5e-60 235.7 156 76.3
Oeu042923.1 Olea europaea HOM05D003148 ORTHO05D003894 3.3e-60 235.3 133 85.7
Os04g0637400 Oryza sativa ssp. japonica HOM05D003148 ORTHO05D003894 3.3e-60 235.3 133 84.2
Psat2g015200 Pisum sativum HOM05D003148 ORTHO05D003894 3.3e-60 235.3 133 85.0
PGSC0003DMG402013919 Solanum tuberosum HOM05D003148 ORTHO05D003894 3.3e-60 235.3 133 84.2
Solyc07g064330.3 Solanum lycopersicum HOM05D003148 ORTHO05D003894 4.3e-60 235.0 133 84.2
Sed0003151 Sechium edule HOM05D003148 ORTHO05D003894 5.6e-60 234.6 133 85.7
TPR.G29117 Trifolium pratense HOM05D003148 ORTHO05D003894 5.6e-60 234.6 128 86.7
FAN16G3453 Fragaria x ananassa HOM05D003148 ORTHO05D003894 7.4e-60 234.2 133 83.5
FAN21G1173 Fragaria x ananassa HOM05D003148 ORTHO05D003894 7.4e-60 234.2 133 83.5
Ca_14812_v3 Cicer arietinum L. HOM05D003148 ORTHO05D003894 9.6e-60 233.8 133 84.2
CAN.G337.107 Capsicum annuum HOM05D003148 ORTHO05D003894 1.3e-59 233.4 133 83.5
FvH4_3g22230 Fragaria vesca HOM05D003148 ORTHO05D003894 1.3e-59 233.4 133 83.5
FAN11G2520 Fragaria x ananassa HOM05D003148 ORTHO05D003894 1.3e-59 233.4 133 83.5
Medtr3g050110 Medicago truncatula HOM05D003148 ORTHO05D003894 1.3e-59 233.4 133 83.5
Medtr3g050140 Medicago truncatula HOM05D003148 ORTHO05D003894 1.3e-59 233.4 133 83.5
Peaxi162Scf00450g00842 Petunia axillaris HOM05D003148 ORTHO05D003894 1.3e-59 233.4 133 85.0
RcHm_v2.0_Chr5g0038301 Rosa chinensis HOM05D003148 ORTHO05D003894 1.3e-59 233.4 133 83.5
SGA_v2.0_scaffold9G05063 Striga asiatica HOM05D003148 ORTHO05D003894 1.3e-59 233.4 130 86.2
EL10Ac3g07232 Beta vulgaris HOM05D003148 ORTHO05D003894 1.6e-59 233.0 133 83.5
ECA246G3119 Erigeron canadensis HOM05D003148 ORTHO05D003894 1.6e-59 233.0 130 85.4
VMungo0647G1963 Vigna mungo HOM05D003148 ORTHO05D003894 1.6e-59 233.0 133 85.0
HanXRQChr05g0159091 Helianthus annuus HOM05D003148 ORTHO05D003894 2.8e-59 232.3 130 85.4
HanXRQChr05g0159101 Helianthus annuus HOM05D003148 ORTHO05D003894 2.8e-59 232.3 130 85.4
HanXRQChr05g0159391 Helianthus annuus HOM05D003148 ORTHO05D003894 2.8e-59 232.3 130 85.4
Ah.13g076880 Amaranthus hybridus HOM05D001433 ORTHO05D005172 3.7e-59 231.9 131 84.0
MD11G1221900 Malus domestica HOM05D003148 ORTHO05D003894 3.7e-59 231.9 133 84.2
Hund24589 Selenicereus undatus HOM05D003148 ORTHO05D003894 3.7e-59 231.9 133 83.5
Sopen07g032480 Solanum pennellii HOM05D003148 ORTHO05D003894 3.7e-59 231.9 133 83.5
MSTRG.12966 Avicennia marina HOM05D003148 ORTHO05D003894 4.8e-59 231.5 156 75.0
MSTRG.14430 Avicennia marina HOM05D003148 ORTHO05D003894 6.2e-59 231.1 130 86.2
C05p43810 Brassica napus HOM05D003148 ORTHO05D003894 6.2e-59 231.1 133 83.5
BolC5t33096H Brassica oleracea HOM05D003148 ORTHO05D003894 6.2e-59 231.1 133 83.5
Eucgr.F00964 Eucalyptus grandis HOM05D003148 ORTHO05D003894 6.2e-59 231.1 130 84.6
AUR62030324 Chenopodium quinoa HOM05D003148 ORTHO05D003894 8.1e-59 230.7 133 82.0
Lsat_1_v5_gn_1_29100 Lactuca sativa HOM05D003148 ORTHO05D003894 8.1e-59 230.7 130 86.2
BraA05t21714Z Brassica rapa HOM05D003148 ORTHO05D003894 1.4e-58 229.9 133 82.7
Aqoxy3G04136 Aquilegia oxysepala HOM05D003148 ORTHO05D003894 1.8e-58 229.6 133 83.5
CARHR096300 Cardamine hirsuta HOM05D003148 ORTHO05D003894 1.8e-58 229.6 133 82.7
Hund19099 Selenicereus undatus HOM05D003148 ORTHO05D003894 1.8e-58 229.6 133 82.0
AUR62018343 Chenopodium quinoa HOM05D003148 ORTHO05D003894 2.4e-58 229.2 133 81.2
Ciclev10007282m.g Citrus clementina HOM05D003148 ORTHO05D003894 4.0e-58 228.4 133 85.7
Thhalv10019969m.g Eutrema salsugineum HOM05D003148 ORTHO05D003894 4.0e-58 228.4 133 81.2
AL3G34360 Arabidopsis lyrata HOM05D003148 ORTHO05D003894 5.3e-58 228.0 130 84.6
Carub.0003s2050 Capsella rubella HOM05D003148 ORTHO05D003894 5.3e-58 228.0 130 84.6
Sc19g0008220 Simmondsia chinensis HOM05D003148 ORTHO05D003894 5.3e-58 228.0 133 82.0
THA.LOC104817879 Tarenaya hassleriana HOM05D003148 ORTHO05D003894 5.3e-58 228.0 133 81.2
Aa31LG10G3300 Aethionema arabicum HOM05D003148 ORTHO05D003894 6.9e-58 227.6 133 81.2
Aa31LG8G7340 Aethionema arabicum HOM05D003148 ORTHO05D003894 6.9e-58 227.6 133 81.2
A05p19930 Brassica napus HOM05D003148 ORTHO05D003894 6.9e-58 227.6 128 83.6
C05p33280 Brassica napus HOM05D003148 ORTHO05D003894 6.9e-58 227.6 128 83.6
BolC5t32054H Brassica oleracea HOM05D003148 ORTHO05D003894 6.9e-58 227.6 128 83.6
BraA05t20898Z Brassica rapa HOM05D003148 ORTHO05D003894 6.9e-58 227.6 128 83.6
BcaB02g11185 Brassica carinata HOM05D003148 ORTHO05D003894 9.0e-58 227.3 130 83.1
PSO541G1561 Papaver somniferum HOM05D003148 ORTHO05D003894 9.0e-58 227.3 128 85.2
Zm00001eb431790 Zea mays HOM05D003148 ORTHO05D003894 9.0e-58 227.3 133 81.2
PSO675G7850 Papaver somniferum HOM05D003148 ORTHO05D003894 1.2e-57 226.9 128 85.2
Sp1g37600 Schrenkiella parvula HOM05D003148 ORTHO05D003894 1.2e-57 226.9 130 82.3
AL1G58530 Arabidopsis lyrata HOM05D003148 ORTHO05D003894 1.5e-57 226.5 133 78.9
AT3G20540 Arabidopsis thaliana HOM05D003148 ORTHO05D003894 1.5e-57 226.5 130 83.8
Carub.0001s3979 Capsella rubella HOM05D003148 ORTHO05D003894 1.5e-57 226.5 130 81.5
CARHR040890 Cardamine hirsuta HOM05D003148 ORTHO05D003894 1.5e-57 226.5 130 81.5
Haze_09649 Corylus avellana HOM05D003148 ORTHO05D003894 1.5e-57 226.5 133 82.0
Sp3g18540 Schrenkiella parvula HOM05D003148 ORTHO05D003894 1.5e-57 226.5 130 83.1
Os08g0175300 Oryza sativa ssp. japonica HOM05D003148 ORTHO05D003894 2.6e-57 225.7 133 79.7
HPP92_009350 Vanilla planifolia HOM05D003148 ORTHO05D003894 2.6e-57 225.7 130 82.3
AT1G50840 Arabidopsis thaliana HOM05D003148 ORTHO05D003894 3.4e-57 225.3 133 78.2
A05p28320 Brassica napus HOM05D003148 ORTHO05D003894 4.5e-57 224.9 134 82.1
Thhalv10011195m.g Eutrema salsugineum HOM05D003148 ORTHO05D003894 4.5e-57 224.9 133 79.7
Migut.H01840 Erythranthe guttata HOM05D003148 ORTHO05D003894 7.6e-57 224.2 130 85.4
SEGI_28554 Sequoiadendron giganteum HOM05D003148 ORTHO05D003894 9.9e-57 223.8 130 82.3
BcaC05g27391 Brassica carinata HOM05D003148 ORTHO05D003894 1.3e-56 223.4 131 82.4
Cfa020383 Carpinus fangiana HOM05D003148 ORTHO05D003894 8.4e-56 220.7 130 82.3
Glyma.19G036300 Glycine max HOM05D003148 ORTHO05D003894 1.1e-55 220.3 122 87.7
AagrBONN_evm.TU.Sc2ySwM_228.5326 Anthoceros agrestis HOM05D003148 ORTHO05D003894 1.2e-54 216.9 133 78.2
Atru.chr6.8 Acer truncatum HOM05D003148 ORTHO05D003894 1.0e-53 213.8 122 86.1
PSO017G6339 Papaver somniferum HOM05D003148 ORTHO05D003894 3.9e-53 211.8 128 79.7
Mapoly0039s0093 Marchantia polymorpha HOM05D003148 ORTHO05D003894 1.9e-52 209.5 130 77.7
Pp3c14_14550 Physcomitrium patens HOM05D003148 ORTHO05D003894 4.8e-51 204.9 128 77.3
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 1.4e-50 203.4 127 78.0
SMO356G0432 Selaginella moellendorffii HOM05D003148 ORTHO05D003894 6.9e-50 201.1 135 73.3
Haze_09651 Corylus avellana HOM05D003148 ORTHO05D003894 7.6e-49 197.6 186 60.2
Lj6A79G3 Lonicera japonica HOM05D003148 ORTHO05D003894 3.5e-46 188.7 135 65.9
vmacro09733 Vaccinium macrocarpon HOM05D003148 ORTHO05D003894 4.6e-46 188.3 264 44.7
Cfa019820 Carpinus fangiana HOM05D003148 ORTHO05D003894 6.7e-45 184.5 104 85.6
CDE01G0619 Ceratophyllum demersum HOM05D003148 ORTHO05D003894 1.9e-44 183.0 153 65.4
Zm00001eb414740 Zea mays HOM05D003148 ORTHO05D003894 4.3e-44 181.8 133 68.4
Glyma.08G313400 Glycine max HOM05D003148 ORTHO05D003894 2.2e-43 179.5 97 88.7
TPR.G16586 Trifolium pratense HOM05D003148 ORTHO05D003894 6.3e-43 177.9 102 81.4
MELO3C000081.2 Cucumis melo HOM05D003148 ORTHO05D003894 3.1e-42 175.6 97 87.6
unitig_52.g17354 Utricularia gibba HOM05D003148 ORTHO05D003894 9.0e-42 174.1 99 84.8
Duzib170G0475 Durio zibethinus HOM05D003148 ORTHO05D003894 1.5e-41 173.3 104 76.9
Duzib170G0998 Durio zibethinus HOM05D003148 ORTHO05D003894 1.1e-39 167.2 97 82.5
MCO10G006 Micromonas commoda HOM05D003148 ORTHO05D003894 4.6e-38 161.8 130 66.9
PRCOL_00004766 Prasinoderma coloniale HOM05D003148 ORTHO05D003894 6.1e-38 161.4 127 63.0
SEGI_10889 Sequoiadendron giganteum HOM05D003148 ORTHO05D003894 1.8e-37 159.8 97 78.4
SHI31847 Sapria himalayana HOM05D003148 ORTHO05D003894 9.7e-36 154.1 123 63.4
Lj6C83G1 Lonicera japonica HOM05D003148 ORTHO05D003894 1.7e-35 153.3 185 46.5
LjContig00351g0021948 Lotus japonicus HOM05D003148 ORTHO05D003894 1.7e-35 153.3 87 81.6
Lju760A7T19 Lonicera japonica HOM05D003148 ORTHO05D003894 3.1e-34 149.1 102 67.6
PRCOL_00004837 Prasinoderma coloniale HOM05D003148 ORTHO05D003894 1.7e-32 143.3 106 66.0
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 3.2e-31 139.0 134 55.2
Glyma.13G112951 Glycine max HOM05D003148 ORTHO05D003894 4.2e-31 138.7 76 84.2
Glyma.14G191601 Glycine max HOM05D003148 ORTHO05D003894 4.2e-31 138.7 76 84.2
Lsat_1_v5_gn_3_87421 Lactuca sativa HOM05D003148 ORTHO05D003894 3.3e-28 129.0 84 72.6
Lsat_1_v5_gn_3_87460 Lactuca sativa HOM05D003148 ORTHO05D003894 3.7e-27 125.6 86 68.6
Oeu062599.1 Olea europaea HOM05D003148 ORTHO05D003894 8.2e-27 124.4 89 67.4
arahy.Tifrunner.gnm1.ann1.CSHU8D Arachis hypogaea HOM05D003148 ORTHO05D003894 1.5e-25 120.2 89 66.3
Cre08.g363837 Chlamydomonas reinhardtii HOM05D003148 ORTHO05D003894 5.0e-24 115.2 132 51.5
Nitab4.5_0000397g0350 Nicotiana tabacum HOM05D003148 ORTHO05D003894 5.9e-17 91.7 133 42.9
Nitab4.5_0000622g0240 Nicotiana tabacum HOM05D003148 ORTHO05D003894 7.7e-17 91.3 130 43.8
arahy.Tifrunner.gnm1.ann1.CVK6CU Arachis hypogaea HOM05D003148 ORTHO05D002594 1.0e-13 80.9 50 72.0
arahy.Tifrunner.gnm1.ann1.QLJ615 Arachis hypogaea HOM05D003148 ORTHO05D003894 2.6e-12 76.3 99 47.5
SEGI_08935 Sequoiadendron giganteum HOM05D003148 ORTHO05D003894 1.4e-10 70.5 41 85.4
arahy.Tifrunner.gnm1.ann1.L8USRH Arachis hypogaea HOM05D003148 ORTHO05D003894 1.2e-09 67.4 47 72.3
MELO3C025395.2 Cucumis melo HOM05D003148 ORTHO05D003894 5.9e-09 65.1 35 82.9
CBR_g50948 Chara braunii HOM05D003148 ORTHO05D003894 2.9e-08 62.8 33 87.9
Cre06.g257800 Chlamydomonas reinhardtii HOM05D003889 ORTHO05D004407 9.4e-07 57.8 130 29.2


User provided reference genes

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